1F3M,2HY8,1YHV,3FXZ


Conserved Protein Domain Family
STKc_PAK_I

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cd06647: STKc_PAK_I 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270814
Aligned: 11 rows
Threshold Bit Score: 546.063
Created: 3-Sep-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:2HY8; Human Pak1 with bound St2001; contacts 4A
    View structure with Cn3D
  • Structure:3FXZ; Human PAK1 binds large ruthenium complex; contacts at 4A.
    View structure with Cn3D
  • Comment:Also based on the structures of human PAK4 and PAK5 bound to purine-based inhibitors that mimic the binding of ATP, and on the binding of other related proteins with structure to ATP or inhibitors.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #####   #            # #                            #             
1F3M_C        14 SVGDPKKKYTRFEKIGQGASGTVYTAMDvatGQEVAIRQMNLQQQPKKELIINEILVMRENkNPNIVNYLDSYLVGDELW 93  human
2HY8_1        14 SVGDPKKKYTRFEKIGQGASGTVYTAMDvatGQEVAIRQMNLQQQPKKELIINEILVMRENkNPNIVNYLDSYLVGDELW 93  human
1YHV_A        14 SVGDPKKKYTRFEKIGQGASGTVYTAMDvatGQEVAIRQMNLQQQPKKELIINEILVMRENkNPNIVNYLDSYLVGDELW 93  human
3FXZ_A        14 SVGDPKKKYTRFEKIGQGASGTVYTAMDvatGQEVAIRQMNLQQQPKKELIINEILVMRENkNPNIVNYLDSYLVGDELW 93  human
Q17850       287 SIGNPDRKYRKVDKIGSGASGSVYTAIEistEAEVAIKQMNLKDQPKKELIINEILVMRENkHANIVNYLDSYLVCDELW 366 nematode
AAQ23609     422 SVGDPNRKYTKMEKIGQGASGTVYTAIEsstGMEVAIKQMNLSQQPKKELIINEILVMRENkHPNVVNYLDSYLVSEELW 501 fruit fly
XP_001625767 218 SIGDPKKKYTKFEKIGQGASGTVYTAIEvatGHEVAIKQMNLSQQPKKELIINEILVMRENkHPNIVNYVDSYLVGEELW 297 starlet sea ane...
NP_001081929 244 SVGDPKKKYTRFEKIGQGASGTVYIAVDvatGQEVAIKQMNLQQQPKKELIINEILVMRENkHPNIVNYLDSYLVGEELW 323 African clawed ...
Q64303       241 SIGDPKKKYTRYEKIGQGASGTVFTATDvalGQEVAIKQINLQKQPKKELIINEILVMKELkNPNIVNFLDSYLVGDELF 320 Norway rat
NP_001167103 267 SVGDPKKKYTRFEKIGQGASGTVYTAIDiatGQEVAIKQMNLQQQPKKELIINEILVMRENkNPNIVNYLDSYLVGEELW 346 Atlantic salmon
O75914       275 SVGDPKKKYTRFEKIGQGASGTVYTALDiatGQEVAIKQMNLQQQPKKELIINEILVMRENkNPNIVNYLDSYLVGDELW 354 human
Feature 1          ##### ##  #                                      ## #         ##              
1F3M_C        94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITPEQSKR 173 human
2HY8_1        94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITPEQSKR 173 human
1YHV_A        94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITPEQSKR 173 human
3FXZ_A        94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITPEQSKR 173 human
Q17850       367 VVMEYLAGGSLTDVVTECQMEDGIIAAVCREVLQALEFLHSRHVIHRDIKSDNILLGmDGSVKLTDFGFCAQLSPEQRKR 446 nematode
AAQ23609     502 VVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGlDGSVKLTDFGFCAQISPEQSKR 581 fruit fly
XP_001625767 298 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNGVIHRDIKSDNILLGmDGQVKLTDFGFCATITPEQNKR 377 starlet sea ane...
NP_001081929 324 VVMEYLAGGSLTDVVTETCLQEGEIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGAVKLTDFGFCAQITPEQSKR 403 African clawed ...
Q64303       321 VVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGmEGSVKLTDFGFCAQITPEQSKR 400 Norway rat
NP_001167103 347 VVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITPEQSKR 426 Atlantic salmon
O75914       355 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITPEQSKR 434 human
Feature 1                                                                                        
1F3M_C       174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPekLSAIFRDFLNRC 253 human
2HY8_1       174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPekLSAIFRDFLNRC 253 human
1YHV_A       174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPekLSAIFRDFLNRC 253 human
3FXZ_A       174 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPekLSAIFRDFLNRC 253 human
Q17850       447 TTMVGTPYWMAPEVVTRKQYGPKVDVWSLGIMAIEMVEGEPPYLNENPLRAIYLIATNGKPDFPGRdsMTLLFKDFVDSA 526 nematode
AAQ23609     582 TTMVGTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATNGKPEIKEKdkLSSAFQDFLDQC 661 fruit fly
XP_001625767 378 STMVGTPYWMAPEVVTRKQYGPRVDVWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELAHPekLSPVFKDFLAQS 457 starlet sea ane...
NP_001081929 404 STMVGTPYWMAPEVVTRKAYGPKVDVWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQQPekQSSAFRDFLSRC 483 African clawed ...
Q64303       401 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPekLSPIFRDFLNRC 480 Norway rat
NP_001167103 427 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPekLSSVFRDFLNCC 506 Atlantic salmon
O75914       435 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPerLSAVFRDFLNRC 514 human
Feature 1                             
1F3M_C       254 LDMdVEKRGSAKELLQHQFLK 274 human
2HY8_1       254 LDMdVEKRGSAKELLQHQFLK 274 human
1YHV_A       254 LDMdVEKRGSAKELLQHQFLK 274 human
3FXZ_A       254 LEMdVEKRGSAKELLQHQFLK 274 human
Q17850       527 LEVqVENRWSASQLLTHPFLR 547 nematode
AAQ23609     662 LEVeVDRRASALDLLKHPFLK 682 fruit fly
XP_001625767 458 LEMdVEKRSSARELLQHPFLK 478 starlet sea anemone
NP_001081929 484 LEMdVEKRVSARDLLQHPFLK 504 African clawed frog
Q64303       481 LEMdVEKRGSAKELLQHPFLK 501 Norway rat
NP_001167103 507 LEMdVEKRGSANDLLQHQFLK 527 Atlantic salmon
O75914       515 LEMdVDRRGSAKELLQHPFLK 535 human

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