Conserved Protein Domain Family
IpaC_SipC

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TIGR02101: IpaC_SipC 
type III secretion target, IpaC/SipC family
This model represents a family of proteins associated with bacterial type III secretion systems, which are injection machines for virulence factors into host cell cytoplasm. Characterized members of this protein family are known to be secreted and are described as invasins, including IpaC from Shigella flexneri (SP:P18012) and SipC from Salmonella typhimurium (GB:AAA75170.1). Members may be referred to as invasins, pathogenicity island effectors, and cell invasion proteins. [Cellular processes, Pathogenesis]
Statistics
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PSSM-Id: 273972
Aligned: 5 rows
Threshold Bit Score: 289.493
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAQ60288      15 VLHSWLAAKr--EDAGFTAGVEHTAN----------KLEQIIDKELEQRGAEQDPGFDISGLSTRMAA------------ 70  Chromobacterium...
P18012        49 VLTTTLNDD---QLLKLSEQVQHDSEiia-----rlTDKKMKDLSEMSHTLTPENTLDISSLSSNAVS------------ 108 Shigella flexneri
AAK84121     127 LLDALLADDaeqRNLAAAAQLMLGGSilke---anaVQMSQKGEDYKVESPNSAKQHEFIGFQTNETMr----------- 192 Yersinia entero...
WP_023218631  69 TITSFLKASi--QNTDMNQDLNALANnv------ttKANEVVQTQLREQQAEVGKFFDISGMSSSAVA------------ 128 Salmonella ente...
WP_009896151  47 laavvgervsprRDAGAGAQRVELAQpkpaaqtratDRRTVSGMEREHRRLAASQMPAVTGMHEALVQrhvspggaktpg 126 Burkholderia th...
AAQ60288      71 -----------------------LLSQAIVLMSALRTADNALSTKLSLVSFDATKATAASMVREGIANLSSSIVQSVGQV 127 Chromobacterium...
P18012       109 -----------------------LIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLAALSSSITGAVTQV 165 Shigella flexneri
AAK84121     193 ----------------------fMFSILRKVLAEINISERRTHSMLAALSAEMTQMAADSTIREGKEIYHSAVIGFATAM 250 Yersinia entero...
WP_023218631 129 -----------------------LLAAANTLMLTLNQADSKLSGKLSLVSFDAAKTTASSMMREGMNALSGSISQSALQL 185 Salmonella ente...
WP_009896151 127 eggatrvggdaprfsfaedkafdAMIALGIAMQKNVQSDLVMQGKLTTLAHDAMMSAAAQDRSIGAAQMTAAIAGGALQA 206 Burkholderia th...
AAQ60288     128 AITGVGAKKSLNGLNAERGALKNNAPKLGKLGDEGRNVQATLSRQNTVKLAADadglk-qvglkPQNgAARPEVAELsaq 206 Chromobacterium...
P18012       166 GITGIGAKKTHSGISDQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP-----------QTN-SSTKFLGKNk-- 231 Shigella flexneri
AAK84121     251 IITGVGVGLQAGGLFKQSQAVKNHLKPSNQHSADAKQLTLQMNQVEAPAKVAIs----------RTG-ADGQKMTQTt-- 317 Yersinia entero...
WP_023218631 186 GITGVGAKLEYKGLQNERGALKHNAAKIDKLTTESHSIKNVLNGQNSVKLGAEgvdslkslnmkKTGtDATKNLNDAtlk 265 Salmonella ente...
WP_009896151 207 ATSLGGAVQQMKGLGTKSMSIEKELKPQAELKQFHAEQALELRGINKPVLSNDe----------VSHvKVKRETGESvr- 275 Burkholderia th...
AAQ60288     207 pnaaasvadgmagdkisLQSSNSKLARQHEAALGSSTEDLTAKSQAEQLAMDDTKLKAQAKQTTGKAIMDSSAAAGNIAG 286 Chromobacterium...
P18012       232 -----------------LAPDNISLSTEHKTSLSSPDISLQDKIDTQRRTYELNTLSAQQKQNIGRATMETSAVAGNIST 294 Shigella flexneri
AAK84121     318 -------------------APNKAEQAQIKQQQQQRVAEAEDAAELHKQKYNQQTDKYQAMGRIVDQATRMSDNAAQVSS 378 Yersinia entero...
WP_023218631 266 snagt-----sateslgIKDSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARKMQMTGDLIMKNSVTVGGIAG 340 Salmonella ente...
WP_009896151 276 ---------------heIDPGGERMSDEHASVLAQEAPARQHRIDMHGMRHEQNLVKAGRQQMKGDLIQSGGQVGKNQID 340 Burkholderia th...
AAQ60288     287 GSGRYAATLEQSEQQISQASSRVASTASEETRESSRKADSIIQELLRTLEGISQSKSSAMAAIA 350 Chromobacterium violaceum ATCC ...
P18012       295 SGGRYASALEEEEQLISQASSKQAEEASQVSKEASQATNQLIQKLLNIIDSINQSKNSAASQIA 358 Shigella flexneri
AAK84121     379 ASNQLAVKQAEADKSIQTSVADTARSAANDTEKQMDQTKQFLEEIKKILNSIMESTTRANQAIV 442 Yersinia enterocolitica
WP_023218631 341 ASGQYAATQERSEQQISQVNNRVASTASDEARESSRKSTSLIQEMLKTMESINQSKASALAAIA 404 Salmonella enterica
WP_009896151 341 GASAQQQGAERAEQKEDESAQQTAMAAASARDEAAHRGRDAAQKAIDAAKSQVANDNAVAAQVA 404 Burkholderia thailandensis
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