Conserved Protein Domain Family
R-SNARE_STXBP6

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cd15892: R-SNARE_STXBP6 
SNARE domain of STXBP6
Syntaxin binding protein 6 (STXBP6, also called Amisyn), as well as its relative Syntaxin binding protein 5 (STXBP5, also called Tomosyn), contains a C-terminal R-SNARE-like domain, which allows it to assemble into SNARE complexes, which in turn makes the complexes inactive and inhibits exocytosis. In general, SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins consist of coiled-coil helices (called SNARE motifs) which mediate the interactions between SNARE proteins, and a transmembrane domain. The SNARE complex mediates membrane fusion, important for trafficking of newly synthesized proteins, recycling of pre-existing proteins and organelle formation. SNARE proteins are classified into four groups, Qa-, Qb-, Qc- and R-SNAREs, depending on whether the residue in the hydrophilic center layer of the four-helical bundle is a glutamine (Q) or arginine (R). Qc-, as well as Qa- and Qb-SNAREs, are localized to target organelle membranes, while R-SNARE is localized to vesicle membranes. They form unique complexes consisting of one member of each subgroup, that mediate fusion between a specific type of vesicles and their target organelle.
Statistics
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PSSM-Id: 277245
Aligned: 5 rows
Threshold Bit Score: 127.575
Created: 25-Jul-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
heterotetramerzero layer
Feature 1:heterotetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on homology to other members of the family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ##  ## ### ###### ### ## ##  ## ###### ### ## ###### ##      
EHB15497      69 MGGNSILHSAADSVTSAVQKASQALNERGERLGRAEEKTEDMKNSAQQFAETAHKTQEALVS 130 naked mole-rat
EAW65996     149 MGGNSILHSAADSVTSAVQKASQALNERGERLGRAEEKTEDLKNSAQQFAETAHKLAMKHKC 210 human
CAG10386     150 MGGNSILHSAADSVTSAVQKASQALNERGERLGRAEDRTADMMNSAEQFAVTAHKVRSRSDS 211 spotted green pufferfish
NP_001186640 149 MGGNSILHSAADSVTSAVQKASQALNERGERLGRAEEKTEELKNSAQQFAETAHKLAMKHKC 210 chicken
NP_001005719 149 FSGNSILHSAADSVTSAVQKASQALNERGERLGRAEESTAEMMNSAQQFADTAHKLAMKHKC 210 western clawed frog

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