1JDB


Conserved Protein Domain Family
CPSase_L_D3
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pfam02787: CPSase_L_D3 (this model, PSSM-Id:280882 is obsolete and has been replaced by 460695)
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Carbamoyl-phosphate synthetase large chain, oligomerization domain
Carbamoyl-phosphate synthase catalyzes the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain.
Links
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Statistics
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PSSM-Id: 280882
Aligned: 1128 rows
Threshold Bit Score: 80.133
Created: 11-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1JDB_B        426 RELKDAGADRIWYIADAFRaGlSVDGVFNLTNIDRWFLVQIEELVRLEEKVaevgitgLnadfLRQLKRKGFADARLA-- 503  Escherichia c...
Q8DYW1        309 fALIQKKENRLAYLLEAFRrGfDLYDLSSVTKINPFYLDKCLHIVELYENLnksqy---nvdiYKEAKRYGFSDDYIAss 385  Streptococcus...
Q5FJY6        429 EDLANPDELHLVKLLAAIKqGiTFAELQKVTGLHPIYYQKLLHIINIANRLisdkdn-lsfdlLEEAKVYGFFNTLLA-- 505  Lactobacillus...
Q74JC5        425 QDLSKPNEIHLITLLAAIAkGiNYHTLHQLLHIHLVFLQKFNHILILLKKLrndel---tadlMLKVKKNGFSNRLIA-- 499  Lactobacillus...
Q1GA90        431 DDLRHPNEMHLVQLLAALSqGiDYQAISSVLNIHPVYYQKLRYLVKIGRDIahage--ldhdlLLKAKIRGFSSDLLA-- 506  Lactobacillus...
Q8Y665        422 RKICFPEDDRLFFLAAALRrGqTIEQLHEKTKIDLFFLYKLSKTIELENRIke---npQnqeiLAEAKQAGFSDAFLA-- 496  Listeria mono...
WP_006587312  430 QQLAHPDELHIITLLAAISsGlTYTQIHEVCRLHPLYFEKLSQVIEVGKQLknel----skevLVTAKKLGFSNTLIS-- 503  Lactobacillus...
KEK14563      419 AKIVHPEAGRLFVLIEAMQrGySVNELAEMTKIDPFYFEQINKMRLLIREIadhpn---kepvLQKAKSYGLSNQLIA-- 493  Lactobacillus...
WP_041812833  203 ERLIHPRPHRLLTLLEALArGySSDELTELTKIDRYYFDQLKRGTDLVRRLnenqg---sldiLREAKYWGLSDDQIA-- 277  Lactobacillus...
WP_014082000  413 NELIHPTDIQILILFEAVNrGySTSDLSELTKIDEFFFVIISNILKQIKKVknnpl---npsvLLNGSKFGFGTGMFC-- 487  Lactobacillus...

1JDB_B        504 ---KLAG-VREAeIRKLRd--QYDLHPVYKRVDTCAAEFAT-DTAYMYS 545  Escherichia coli K-12
Q8DYW1        386 wqiSL--------IDMLEyrkKHSVAPVLKQVEQSSGVLTGhQIQYFRS 426  Streptococcus agalactiae serogroup V
Q5FJY6        506 ---KIl-nKSVEdVQEIIeqyNLT--PSFLKIDGSAGVYKP-NVCAYYS 547  Lactobacillus acidophilus
Q74JC5        500 ---EIt-qRDEKsIADLCkkwSIK--PSYIEIDGTAGLIHP-NIQAVYS 541  Lactobacillus johnsonii
Q1GA90        507 ---ELt-kMDVHdIFPLLnekDVR--PTFSAIDDSAGVYQP-KVKVYYQ 548  Lactobacillus delbrueckii subsp. bulgaricus ...
Q8Y665        497 ---TCWNvDEQA-IYDLRk--AQNLFPVYKMVDTCAAEFES-TTPYFYS 538  Listeria monocytogenes EGD-e
WP_006587312  504 ---IIt-qKSLEdIGDLCrnyQLN--SSYLLLDGSAGLYRA-NCSVCYS 545  Lactobacillus jensenii
KEK14563      494 ---RLWN-TTPEqVYQMSi--DHQLLTKYKEIEPSAGEFDQ-HTNSFYS 535  Lactobacillus reuteri
WP_041812833  278 ---QSWA-ISPQkVADLRe--ENQLHRVYKEVDPSAGEFDE-HPHRFYA 319  Lactobacillus fermentum
WP_014082000  488 ---HYWN-VTNSkINRIAi--ENNIYKTYKMIEPTGGEFVE-KIDSFYG 529  Lactobacillus sanfranciscensis
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