Conserved Protein Domain Family
RR_TM4-6

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pfam06459: RR_TM4-6 (this model, PSSM-Id:283990 is obsolete and has been replaced by 461918)
Ryanodine Receptor TM 4-6
This region covers TM regions 4-6 of the ryanodine receptor 1 family.
Statistics
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PSSM-Id: 283990
Aligned: 53 rows
Threshold Bit Score: 196.798
Created: 12-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
E9Q401       4333 MPDPT----QDEVRGD---EEEGERKPLESALpsEDLTDlkeLTEESDLLSDifg-ldlKR-EGGqyklipHNPNAGLSD 4403 house mouse
Q7PMK5       4460 MRGPA----QEE-EEPi-------pEAEPSLRalPPLP-----LEEPPGTVQafgldisKE-ENGqyrmapHESP----- 4516 Anopheles gam...
Q17EB5       4472 MRGST----QEE-EEVi-------vEVEPSLRalPPLP-----TEEPPSTVQafgldisKE-ENGqyrvqpHESP----- 4528 yellow fever ...
XP_009860189 4324 MPCPTheriQHSVEN-----------LSDSGT--DDTGQdqtKGDKEDFISDvfg-mdiKKsKELikavvhTKPEAGFGD 4389 vase tunicate
XP_002032982 3157 ahfcvvryifgillnlmrgpapeqeeepvveeetfgralpplpleeppGTVQafgldinKE-ENGmykvvvHESPA---- 3231 Drosophila se...
XP_003246190 4433 msvielitsffklwfylifytgysgvyvlryisrilmqlmsgtqseettvevveeksgsfrmlpalpssgmdEPPSTLTD 4512 pea aphid
XP_012063211 4479 MRGPH-------VEEPv-vIKEEEEKPSRHL---PALPPt---PDESNLQVQafgmditKE-EGGqiklapHEST----- 4538 Atta cephalotes
XP_012544770 4490 glmrgpqveepppepteeekigqlrhrllanqsprhLPAlppADDTGQMQVSafglditKE-DNGqiqvkpHESP----- 4563 domestic silk...
XP_392217    4439 cvigyfmklllalmkgphveepvvevkeeeekpsrhLPAlppTPDESNLQVQafgmditKE-EGGqikiapHES------ 4511 honey bee
XP_008191330 4411 MRGPI--------EEPavlEIKEEEEKVGLSRvlPALP----SSEEQNTQMQafglditKE-DNGqykmaaHESP----- 4472 red flour beetle
E9Q401       4404 LMTNPVPV--PEVQekfQEQKAKEEKEEKEETKSEPeKA-------------------------EGEDGEKeEKA----K 4452 house mouse
Q7PMK5       4517 ------------------ALSPSSSIEETGESSPEDg---------------------------AAELTGEgVPP----G 4547 Anopheles gam...
Q17EB5       4529 ------------------ALSPSSSVEETGESSPEDg---------------------------AGELSAEaAST----E 4559 yellow fever ...
XP_009860189 4390 FTVDEAADt--------FSLIASDYESGINTPRTSKiKKrrkllrkgkqigqtasttstilsslENSSTSEqRLS----N 4457 vase tunicate
XP_002032982 3232 ----------------------NSSMEEGGESSPEDgAAa------------------------SGELVEg-EPH----Q 3260 Drosophila se...
XP_003246190 4513 GNNMRKNSgsPDSK----HLKSNSVGDDKDETSAENhEKe------------------------DGVDGSEqQASfvdlL 4564 pea aphid
XP_012063211 4539 ------------------TSTPQSSIEETGESTPEEgTGe------------------------DGARAEGgE-S----E 4571 Atta cephalotes
XP_012544770 4564 ------------------TTSTPSSGEEADASLDEG-----------------------------LEHSEEqRPP----S 4592 domestic silk...
XP_392217    4512 -----------------ATSTPQSSIEETGESTPEEaTGe------------------------ESARAEGgGDM----E 4546 honey bee
XP_008191330 4473 ------------------TTSQPSSAEGEGETTPEE----------------------------DGEHPEt-ETM----E 4501 red flour beetle
E9Q401       4453 D----------------------------EKSKQKLRQLHTHRYGEpeVPES-----AFWK-------KIIAYQQKLLNY 4492 house mouse
Q7PMK5       4548 Eqmtlvdllgg--------eaakraaqerTEAQKAQEATLASIEAEskKAST-----ETKEpaavhqiDFSKYTKKCVSY 4614 Anopheles gam...
Q17EB5       4560 Ppmtlvdllgg--------eaakraaqerSEAQKAQEATLANIEAEqkKASA-----ETKEpaavtqiDFSKYTKKAVSF 4626 yellow fever ...
XP_009860189 4458 Lksamsfders---------gednispwyTCMKECGRPARYKHEEKteDRNA-----MYLD-------TWNAFCMGTMGL 4516 vase tunicate
XP_002032982 3261 Episivdllgg--------eaakkaaqerQEAQKAQEAAMASIEAEakKSSS-----APQEtpavhqiDFSQYTHRAVSF 3327 Drosophila se...
XP_003246190 4565 Vgesark-----------------dsiagPEVLAQQQAVMAAVEAEikQKNSvenpsAFSTi------DINAYTHRALSF 4621 pea aphid
XP_012063211 4572 PpvtladllggeqaraqaaaaaeaaaaqqAAMAAVEAEAKQEISVEpsTGSS-----I----------DLSQYSHRIVSF 4636 Atta cephalotes
XP_012544770 4593 Lidllggeq------------akkqalerIEAQAAQQAAMSAIEAEskKAVQ-----GPASssalsqvDLSQYTRRAVSF 4655 domestic silk...
XP_392217    4547 Spvsladllggeq----araqaaaaaeaaAAQQAAMAAVEAEAKQEtiAEPS-----ASSI-------DFSEYTHRVVSF 4610 honey bee
XP_008191330 4502 Aplslsdllgg--------eqakraaqekVEAQAAQQAVMQAIESEskQPVV-------TEpsavsqiNFGAYSHRAVSF 4566 red flour beetle
E9Q401       4493 FARNFYNMRMLALFVAFAINFILLFYKVST-SSVVEGkelptr--------------------tssdtaK---------- 4541 house mouse
Q7PMK5       4615 LARNFYNLKYVALVLAFCINFMLLFYKVTTlGDDEDGeggsgesl----------------mglgsglgSglgiletgsg 4678 Anopheles gam...
Q17EB5       4627 LARNFYNLKYVALVLAFGINFMLLFYKVTTlGDDEASegsgddmm-----------------elasglgSglaeavlegg 4689 yellow fever ...
XP_009860189 4517 FARNFYKFKILALGLTFCINFILLFYKw-----------------------------------------H---------- 4545 vase tunicate
XP_002032982 3328 LARNFYNLKYVALVLAFSINFMLLFYKVTSfTEEADSsaeeelilgsgsg------ggaditgsgfggsG---------- 3391 Drosophila se...
XP_003246190 4622 LARNFYNLKYVALVLAFCINFILLFYKVTTlADDLSDdgdvkefalg-------------sagisnddmD---------- 4678 pea aphid
XP_012063211 4637 LARNFYNLKYVALVLAFCINFMLLFYKVSSlADDSDEegsgqiadllt----------eisgegtsglaG---------- 4696 Atta cephalotes
XP_012544770 4656 LARNFYNLKYVALVLAFCINFVLLFYKVSTlDGEKAEgsgigdii-----------------agsgsgqG---------- 4708 domestic silk...
XP_392217    4611 LARNFYNLKYVALVLAFCINFMLLFYKVSSlDSEGGEegsgqivdmlaemsgegasgsgngsgveigsgS---------- 4680 honey bee
XP_008191330 4567 LARNFYNLKYVALVLAFCINFMLLFYRVSTlGDDAegsgskgip----------------dilegsaegSgags------ 4624 red flour beetle
E9Q401       4542 -----Vtns----ldsSPHRII---------------AVHYVLEESSGYMEPTLRILAILHTIISFFCIIGYYCLKVPLV 4597 house mouse
Q7PMK5       4679 ggeggSgd------geGEEEDP---------------PEKVHVDEDFFYMEHVLRIAAILHSLVSLCMLIAYYHLKVPLA 4737 Anopheles gam...
Q17EB5       4690 sgdggSgdg----gdeGDGEDP---------------LEKVEVDEDFFYMEHVMRVAALMHSLVSLCMLIAYYHLKVPLA 4750 yellow fever ...
XP_009860189 4546 -----SinndlkvdseSSEDEV---------------EESLILEDTSKYMEPTLRAFSIIHFILSFSMLVSYYGLKVPLV 4605 vase tunicate
XP_002032982 3392 -----Dggs----gdsEMEDEI---------------PELVHVDEDFFYMEHVLRIAACLHSLVSLAMLIAYYHLKVPLA 3447 Drosophila se...
XP_003246190 4679 -----Dsns----teiADDEGV---------------LELVHVNEDFFYMAHVMRLAALLHSLASLAMLIAYYHLKVPLA 4734 pea aphid
XP_012063211 4697 -----Sgme----igsGSGENGseeedeevqefvevsEDYY-------YMAHVMRLLAALHSIVSLAMLVAYYHLKVPLA 4760 Atta cephalotes
XP_012544770 4709 -----Sgsg----dgsGEEDDA---------------LEVVHIDEDFFYMEHVIKVAAVLHSIVSLAILIGYYHLKVPLA 4764 domestic silk...
XP_392217    4681 -----Geae----seeEEDEYA---------------LEYVEVAEDFYYMAHVIRLMAILHAIVSLAMLVAYYHLKVPLA 4736 honey bee
XP_008191330 4625 -------------gesgEDDDP---------------PELVHVDEDFYYMAHVMRLAAILHSVVSLAMLIAYYNLKVPLA 4676 red flour beetle
E9Q401       4598 I 4598 house mouse
Q7PMK5       4738 I 4738 Anopheles gambiae str. PEST
Q17EB5       4751 I 4751 yellow fever mosquito
XP_009860189 4606 I 4606 vase tunicate
XP_002032982 3448 I 3448 Drosophila sechellia
XP_003246190 4735 I 4735 pea aphid
XP_012063211 4761 I 4761 Atta cephalotes
XP_012544770 4765 I 4765 domestic silkworm
XP_392217    4737 I 4737 honey bee
XP_008191330 4677 I 4677 red flour beetle
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