3J7Y


Conserved Protein Domain Family
PDCD9

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pfam07147: PDCD9 (this model, PSSM-Id:284543 is obsolete and has been replaced by 462101)
Mitochondrial 28S ribosomal protein S30 (PDCD9)
This family consists of several eukaryotic mitochondrial 28S ribosomal protein S30 (or programmed cell death protein 9 PDCD9) sequences. The exact function of this family is unknown although it is known to be a component of the mitochondrial ribosome and a component in cellular apoptotic signaling pathways.
Statistics
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PSSM-Id: 284543
Aligned: 21 rows
Threshold Bit Score: 492.296
Created: 26-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J7Y_s         1 MAAARcwr-pllRGPRLSLHt-AANAaatatettcQDVAA--T-------PVA-------------RYPPIvasMTADSK 56  human
Q9VXP3         8 RHLRT-------TYKRCLSG--QSQL---------QLNST--D-------AEP-------------AYPEI---QDLSFK 44  fruit fly
Q29CP7         8 NQLRA-------SYIRFVAQ--ATSA---------TSNEY--S-------CQP-------------EYPPI---RDLTHK 44  Drosophila pseu...
Q16NZ6         4 QSFRRnlqlmlrSTNRLSLStrALAN---------PSEQY--T-------AQP-------------QYPAI---EDPSFR 49  yellow fever mo...
Q9D0G0         1 MAAARywk-lvpRGRGL-----SQNA---------AAKAS--A-------TAPevrdlevvatpvaRYPPIvasMTADSK 56  house mouse
XP_003216270  19 MAACRgwrllgdAGLRr-----ALHS---------EALAAppS-------VSS-------------LYPPVvasLTAKSQ 64  green anole
XP_004017055   1 MAAARswr-fvlRGPGLSLh-tAAEA---------AVTAP--AvtgsdvkAAPv-----------gRSPPIvasLTADSK 56  sheep
XP_002060186   8 eQLRArlnaacrRYLAIKAepkAVTV---------AESEY--S-------AEP-------------EYPAI---RDMSFK 53  Drosophila virilis
XP_322027      4 RNFRPnlwllgrHGHRALAs-rPLPS---------KEHEY--T-------NSP-------------EYPPI---QDLSFP 48  Anopheles gambi...
XP_967403      2 SALRLnknllkrCKKFKCFs-tAV-L---------QEDEY--T-------ATP-------------QYPPI---LDMSPE 45  red flour beetle
3J7Y_s        57 AARLRRIERWQATVHAAESVDEKLrilTKMQFMKY------MVYPQTFALNADRWYQYFTKTVFlsglppp------pae 124 human
Q9VXP3        45 ARKQKDAANWHEEIRQVPTVEEKM---IKINMPRYygfkvvDFNDSKIPYNALPLTQHYTRTVLedlpsetdkkaqakds 121 fruit fly
Q29CP7        45 ALKRREANDWHEEIRKVPTVEEKI---IKVNMPRYygykvvDFNDNKIPYNALPVTQHYTRTVLkelplls-------ad 114 Drosophila pseu...
Q16NZ6        50 SKKKREAAEWHERIQQLSSVEEKL---FEINMPKYygykahIITDQKFPYNVLPLAQYATRTHLqenlpet------ygk 120 yellow fever mo...
Q9D0G0        57 AARQRRVQRWQATVHAAPSVDEKIrilTKMQFKKY------VVHPQISALNADRWYQSFTKTVFvsglppapa------- 123 house mouse
XP_003216270  65 AAKLRRRQRYHQEIHDAPSAQEKLrlyGKRQRMKY------VVYPQTWALHADRWYQSFTKTAFvpglp----------e 128 green anole
XP_004017055  57 AARQRRVERWHATVHAANSVDEKLrilTKMQFMKY------VVYPQTFALNADRWYQNFTKTVFlsglpplp-----aqp 125 sheep
XP_002060186  54 GRKLQSAAEWHEEIRQVPTVEEKM---IKINMPRYygykvvDLNDTKVPFNALPLTQHYTRTVLeelppk--------qa 122 Drosophila virilis
XP_322027     49 AKKKRERESWHQKIAKLSSVEEKL---FEINMPKYygykmnMLTDEKFPYNIKPFMQYATRTCFqtglpqy------ydp 119 Anopheles gambi...
XP_967403     46 KVRERRKEEEYEGIKAVKTVEEKQ---IKLNMPKYygfksyMLYEDYIPYNSLPLIQHVTRTHLiknenlpn----fynd 118 red flour beetle
3J7Y_s       125 pepePEPEPEpaLDLAALRAVACDcLLQE-----H-----FYLRR-RRRVHRYEESEVISLPFLDQLVSTLVGLLSPHNP 193 human
Q9VXP3       122 eqeqEQPSVD--GLFKAARGDVIDaLEFAhdyykH-----LEKQHnSAESNPVERERILTQIIVEQLNRALLQSLSEEYK 194 fruit fly
Q29CP7       115 etetSEFSSV--AFLKTARDDIIDaLELAhdfynH-----QATLPdVAPSDSVNRERQLTQIIVEQLNRALLQILSADYP 187 Drosophila pseu...
Q16NZ6       121 lgeeAK------KLLEEIRGNLEDvIGFEltgysR-----SY--GsNEEISPEEKEEIVTSSLLTALNRALINSLSKKYT 187 yellow fever mo...
Q9D0G0       124 -----lsppppslDLAALRAAVCDcILQE-----Q-----VY-VRrRRPRSLFDRRQALASSILDQVVRTLVNLLAPLNP 187 house mouse
XP_003216270 129 agqeGLPDGD--LDLAQLRSIACDvLLQE-----Y-----FYQRK-LRPL-PFRQNERGPAPFLSHLVPALVAHLAARNP 194 green anole
XP_004017055 126 drepAQVXDL--AALRAAACDc---LLQE-----H-----FFLRR-KKRAPIYQERYTVASPFLDQLVASLTGLLSVYT- 188 sheep
XP_002060186 123 epgeEKVDLD--ATVKVARNDIIEaLEFA-----HdcykhQLTLL-DTPPDAVTREQQLTQIIVEQINRSALQVLSAEYP 194 Drosophila virilis
XP_322027    120 lkeeAA------KILESIQTELEDtIALEls--nY-----SHVKR-DETVSPVEKEETVVRSLLVQLNRTIANALAPKFN 185 Anopheles gambi...
XP_967403    119 ldvtSA--------LNDVKSDIEEaILIEla--rH-----RQTLD-LQ-GDKVEADNRLGFALSKQINRIITTRMSRHLP 181 red flour beetle
3J7Y_s       194 AL-AAAALDYRCPVHFYWVRGEEIIPRGHRRGRiDDLRYQIDD-------------KPNNQIRISKQLA-EFVpLDY--- 255 human
Q9VXP3       195 HL-DELDVDYNPRHEAFWAVGGVDPPKNVQKSK-KGREWQKDManesvdrmvqytgAPYLALRHRKQLT-PWK-TEAese 270 fruit fly
Q29CP7       188 HL-NDVEVDYNPRHEAFWAVGGVDPPKNVVKSK-KGRDWQKDDasesvdrlvqytgAPYLSLRHRQQLC-PWM-TDGesk 263 Drosophila pseu...
Q16NZ6       188 HL-NEVETDFDPRHESFWFLGGIPPPSLVKKIK-EGVEWQKEYandpydrkiqyigKPYIALRHKHPLD-VFAeNNVdnl 264 yellow fever mo...
Q9D0G0       188 VL-STAALDCKRSVDFYWLRGEERIPAGHRKGHiDALRYQIND-------------KPHNQIRISKQLP-EFVpLDY--- 249 house mouse
XP_003216270 195 VLeTGSAIDYQPDVNFYWMRGEIVVPRGHRKGRiDPMRFQIDD-------------KPHCQIRIMKQLP-EFVpLTY--- 257 green anole
XP_004017055 189 -------LDCNRPVHFYWLRGEEIIPGGHRKGRvDAVRYQIND-------------KPHNQIRISRQLP-EFVpLDY--- 244 sheep
XP_002060186 195 HL-NEVEIDYNPRHEAFWAVGGVDPPKNVVKSK-KGRDWQKADaydsvdrlvqytgEPYLALRHRHQLP-TWK-TPEese 270 Drosophila virilis
XP_322027    186 HL-NEIETDVDPRHEAFWFLGGIYPPNLVRKIK-EGVEWQKQYandpydrniqyvgKPYMALRHKLLLE-PLLpKDLesf 262 Anopheles gambi...
XP_967403    182 HL-KGAQVDLNSRIKSFWLAGGMSPPENIKRYR-RGCSWQKDKeneptnrvmnyigSANVSLRTDLPLKhIISsSDAesp 259 red flour beetle
3J7Y_s       256 ---SVPIEIPTIKCKPDKLPlFKRQYENHIFvgs--ktADPCCYGHTQFHllpdklRRERLLRQN---CADQIEVVFRAN 327 human
Q9VXP3       271 -nlELSKQLPRFKHDPRTLG-YSTKHQHATNvpgywpkGNENNFGLLSFQ------SRAHLQIRPksfGEQDQLEALHSL 342 fruit fly
Q29CP7       264 mmdPHARHLPRFNHDARTLG-YRTSYQHAVNvpgywpsANGANFGLLSFQ------SRASLQMRHkayGDRDLQEALHAL 336 Drosophila pseu...
Q16NZ6       265 dakRDGVEIPEFRFDPITLG-YKTEQRHATTipg-fwpGDQHEFGLVSFQ------RRSHAHLRPsycAIDDLQEALHAQ 336 yellow fever mo...
Q9D0G0       250 ---SIPTEIPVMKCKPDKLPlFRRQYENSIFtgs--ktADPCCYGHTQFHlipdrlKRERLIRQN---QAEQVEAVFRAN 321 house mouse
XP_003216270 258 ---VAPEDIPIIKVLPDKLPlFKRQYYNKIFigs--qiADPCTYGHTQFHllpdrlKRERLIAQN---RADQIETPFRAN 329 green anole
XP_004017055 245 ---SVPVEIPVKNCKPDKLPlFKRQYENAIFigt--rtADPLCYGHTQFHllpdklKRERLLKQN---CADQIEVIFRAN 316 sheep
XP_002060186 271 -nlTLANQLPRYKHDARTLG-YSTKYQHAINvpgywpsVNAPNFGMLSFQs------RAHLQLRPqacGERDQLEALHAL 342 Drosophila virilis
XP_322027    263 dvkQDGAEIPDYRYDPLALG-YIADFRHATTvpg-fwpGEQHEFGLLSFQ------RRSHALNRHkycAVDDLSEAIDAQ 334 Anopheles gambi...
XP_967403    260 -dlS----VPFFEFDPRTVGtVANQHRHIANvpg-fwpGDSREFGFLSYH------KRGHLISRHy-gDANELKEAVDRQ 326 red flour beetle
3J7Y_s       328 AIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQADQNNPRKNICWGTQSKPLYETI-E 406 human
Q9VXP3       343 AIKSSYAWLLAQANYNGFNTYNELTYPMNTQTVITNGREWSFYEYQLNTLLLHGTNVAENPRVNFCRGTKPLPLYAEIsA 422 fruit fly
Q29CP7       337 AIKSSYSWLLAQANYNGFNTYNDLTYPMNTQTVITNGREWSFYEYQLNTLLLHSNQVNENPRVNFCRGTPPLPLYAEIsE 416 Drosophila pseu...
Q16NZ6       337 GIFSSYAWTLGQACYQGFSTFNDLTYPLATQTVITDGKMWSFYAYQLNTTLLHSDQVDVNPRYNQCWGTKELQLYEHVdE 416 yellow fever mo...
Q9D0G0       322 AIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTVQADQNNPRKNLCWGSQSQPLYETV-E 400 house mouse
XP_003216270 330 AITSLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGRYFAFFCYQLNTLALTVDADKNNPRKNICWGTESKPLYEAI-E 408 green anole
XP_004017055 317 AIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTAQADQNNPRKNICWGTQSKPLYETI-E 395 sheep
XP_002060186 343 GIQSSYAWLLAQANYNGFNTYNELTYPLNTQTVITNGREWSFYEYQLNTLLVHGPHVDSNARVNFCRGTAPQPLYAEIsP 422 Drosophila virilis
XP_322027    335 GILSSFAWLLGQACYQGFSVFNDVTYPLTTQTVITDGKYWSFYAYQLNTTLLHSDQVDANSRYNLCWGTDAMQLYESIdE 414 Anopheles gambi...
XP_967403    327 GILASFGWLNAQANFQGFTTFNDVTYPFVTQTVVTNGQVWSFYVYQLNTIVNHSKFFTENAKRNVCWGTPEVKLFEGV-E 405 red flour beetle
3J7Y_s       407 DNDVKGFNDDVLLQIVHFLL 426 human
Q9VXP3       423 SGKCVDFNDNALRHLLNFYA 442 fruit fly
Q29CP7       417 KGKCVDFNDATLKQLLRVYM 436 Drosophila pseudoobscura
Q16NZ6       417 NGKVHGMNDEVLLHLISFYM 436 yellow fever mosquito
Q9D0G0       401 DNDVKGFDDGTLLQIVHFLL 420 house mouse
XP_003216270 409 DNNVKGFNDEILLQLVKFLL 428 green anole
XP_004017055 396 DNDVKGFNDDVLLQLVHFLL 415 sheep
XP_002060186 423 EGKCVDFNDGTLRQLLTLYI 442 Drosophila virilis
XP_322027    415 NGKINGLNKEVLQQIIMFYI 434 Anopheles gambiae str. PEST
XP_967403    406 NDKLVGFNDEVLKMLLKFYA 425 red flour beetle
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