Conserved Protein Domain Family
KASH

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pfam10541: KASH (this model, PSSM-Id:287506 is obsolete and has been replaced by 463142)
Nuclear envelope localization domain
The KASH (for Klarsicht/ANC-1/Syne-1 homology) or KLS domain is a highly hydrophobic nuclear envelope localization domain of approximately 60 amino acids comprising a 20-amino-acid transmembrane region and a 30-35-residue C-terminal region that lies between the inner and the outer nuclear membranes. During meiotic prophase, telomeres cluster to form a bouquet arrangement of chromosomes. SUN and KASH domain proteins form complexes that span both membranes of the nuclear envelope. The KASH domain links the dynein motor complex of the microtubules, through the outer nuclear membrane to the Sad1 domain in the inner nuclear membrane which then interacts with the bouquet proteins Bqt1 and Bqt2 that are complexed with Bqt4, Rap1 and Taz1 and attached to the telomere. SUN domain-containing proteins are essential for recruiting KASH domain proteins at the outer nuclear membrane, and KASH domains provide a generic NE tethering device for functionally distinct proteins whose cytoplasmic domains mediate nuclear positioning, maintain physical connections with other cellular organelles, and possibly even influence chromosome dynamics.
Statistics
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PSSM-Id: 287506
Aligned: 41 rows
Threshold Bit Score: 40.9781
Created: 26-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q17LM5       1216 VWRITKIAVPVQ-LALVLVMCAACFF--------EPHCCDALNTYSMSFTPQLRYiKGPPPV 1268 yellow fever mosquito
XP_006627744  767 lLRLAKAALFLF-LSLALVLALLRQLpa----gaSDPRCHRANTFARSLRLMLHYvNGPPPT 823  spotted gar
XP_007236898  600 lvdVLRSRVMLY-ILLALLLVVVIWPpa----vlKDNQCHRSNTLERSFHFALRYvNGPPPT 656  Mexican tetra
EHB04095      924 LRKACCLVLWLL-LLLLLFLLLLFLLpa----geEALSCTQANNFASSFLLMLHY-NGPPPT 979  naked mole-rat
XP_007985928  997 FRRVCCVALPLQ-LLLLLFLLLLFLLpi----reEDRSCTLANNFARSFTLMLRY-NGPPPT 1052 green monkey
ELK01181       73 LRRVCCVALPLQ-MLLLLLLLLLLLLpv----gnEGRHCALANNLASSFTLMLRY-NGPPPT 128  black flying fox
XP_003467271  341 gdpapasRRPRT--FLLVLLIFLLLVgatlflrmLGGPCCSHGKLARTPYLVLSYvNGLPPV 400  domestic guinea pig
NP_001181098  344 gapdpaSRRPLT-FLLILFLLFLLLVgamfllpvSGGPCCSNARIPRTPHLVLSYvNGLPPV 404  Rhesus monkey
NP_001230216  140 gvptpasrRPLTfFHLLLLLLFLFLVgitlflptSGGSCCSPAQLIGIPYLELSYvNGTPPM 201  cattle
XP_005596708  434 gapapaSRRPLT--FLLLLFLFLLLVgatvllplSGDPCSSPARLARTPYVVLSYvNGPPPV 493  horse
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