Conserved Protein Domain Family
Helicase_C_2

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pfam13307: Helicase_C_2 (this model, PSSM-Id:290046 is obsolete and has been replaced by 463840)
Helicase C-terminal domain
This domain is found at the C-terminus of DEAD-box helicases.
Statistics
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PSSM-Id: 290046
Aligned: 106 rows
Threshold Bit Score: 124.976
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4E5Y3        778 LNFC-RVIPDGMIVFFASYDVEELFHGFLQRSGFYDKInevkRIFREsgrlasskvatnsgvegkSlSHAVDVMLAEYTR 856  Trypanosoma c...
Q9CEK5        619 GELS-K-LNLPMVVLFTSKMALTFVAEKLSAE----GF----EILAQ------------------DiNGSPAQIKKKFDK 670  Lactococcus l...
Q5HP88        716 VEYI-TVTQSKCLVLFTSYKMMHMVQDLLNELPELEDY----VILTQ------------------Q-QNQNYKIVQQFNN 771  Staphylococcu...
WP_015909567  595 ATVAvASREGNVLVGTPSYAEATWMAESLSKRL---DK----PVLLDes---------------sG-DRATESLKDDFFA 651  Halorubrum la...
WP_012657008  671 HYYL-ENMSSKVLILMNSYRQIEILRSYLVELYD--PS----LIITQ------------------TsDVNTLKLNEQFNT 725  Macrococcus c...
EAU65719      742 sgLA-QVMGGRVLGLFASTRRMERIAREVQTRLDPWGI----EVMRQ------------------T-RGHGRSLAARQER 797  Stigmatella a...
WP_013159690  727 RVLL--PKSHRSLSLFTSLKRLHEAKDALQDHP---------HLLVPl-----------------T-RKEREDIASRIKQ 777  Meiothermus s...
CBL08953      480 LQIV-SATHGHTLILFTSYWLMERVFYGLKEQLS--DY----PLFLM------------------G-R-GRLDVISSFRR 532  Roseburia int...
CBK96230      574 YRII-KATNGHTAILFTSYKTLNLVHDLLRDRLT--AY----DTICM------------------T--RSNKNAITDFKK 626  Eubacterium s...
WP_020917169  646 riyqirQLDEQMLVLFNSKKAMFDVSERLDEMEL---H----HLTQE------------------K-NGTAYNVKRRFER 699  Streptococcus...
Q4E5Y3        857 wigtegSGGALLFAVMGGKLSEGINFNDELGRAVIVVGLPYANPSDVELQLYLSHIANTRLlrdagfaasktlavdtvti 936  Trypanosoma c...
Q9CEK5        671 ------GEGKILLGLG--SFWEGVDFDKQNQVILVIPRLPFATPDDILTKKY----AQKFEn------------------ 720  Lactococcus l...
Q5HP88        772 ------FDKSILLGTS--TFFEGFDFQANGLKCVMIAKLPFMNKH----NIKYWLMDSEFTs------------------ 821  Staphylococcu...
WP_015909567  652 ------GDGKVLVTSLRGTLTEGVDYRGDRLSAAVVCGVPIINTARPRTRAVITAYDRRFEs------------------ 707  Halorubrum la...
WP_012657008  726 ------LDNGIFLATQ--TFYEGVDFKYDGFKTVMIISLPFMHPDDLNIMLMRDEVN---D------------------- 775  Macrococcus c...
EAU65719      798 ------DSGTVLLGTK--SFWQGVDIPGRGVACVFIDKLPLEPASRPLVAAREETLARGGNey----------------- 852  Stigmatella a...
WP_013159690  778 ------NPEAPLAALGSRSYMEGVDFP--ALKLVSLERIPFPLP-SLLLSKRMERAYEQGLd------------------ 830  Meiothermus s...
CBL08953      533 ------SGNGVLFASD--SAGEEIDLAGDILSSLIVVKLPFPVP-DPVMEYQRNLYED-FDl------------------ 584  Roseburia int...
CBK96230      627 ------SKNGILFASG--SMWEGVDCVGDCLSSVIIVRLPFP-MRSALMEEKKNNCDSV-Gd------------------ 678  Eubacterium s...
WP_020917169  700 ------GESHILLGTG--AFWEGVDFVQSDKMIEVITRLPFENPKDLFVQKISNHLLAQAKs------------------ 753  Streptococcus...
Q4E5Y3        937 drsvpfnssAEWSLFTDLCIRTVNQSMGRCIRHAD---DYAVAILFDARYG-ErPDIRRRIASWMQP 999  Trypanosoma cruzi
Q9CEK5        721 ---------PFYDFNVPMATLKLRQAIGRVNRRKN---QYSSIVVLDKRLA-G-KSYAKRMRKNLSE 773  Lactococcus lactis subsp. ...
Q5HP88        822 ---------TFKDYVLPDAVTRFRQGLGRLIRHED---DKGLIVSFDDRLV-N-STYKSFFAQSLEh 874  Staphylococcus epidermidis...
WP_015909567  708 ---------GFETALTVPAVRKARQAVGRVIRGTD---EHGVRVLLDARYA-R-ESWNS-VREYLPD 759  Halorubrum lacusprofundi
WP_012657008  776 ---------VFMDYQLPGAVNKLHQATGRLIRNEQ---DKGMLICFDRRLL-E-GRYASYFSHILKS 828  Macrococcus caseolyticus
EAU65719      853 --------lGFLQYRMPRALLLLRQGVGRLIRSQE---DRGVVVIADP--G-H-PSYRQHLLDALag 904  Stigmatella aurantiaca DW4...
WP_013159690  831 ---------KWWDYYLPKAVLSFAQAFGRLIRDQRvgvGDGAFILWDKKLL-N-AAYQVAFYRALPP 886  Meiothermus silvanus
CBL08953      585 ---------YRRDIIIPEMLIKLRQWFGRGIRREK---DTAVFSILDSRASlR-GRYRAEILNTLPt 638  Roseburia intestinalis M50/1
CBK96230      679 ---------FVDRYCTPNMLIKLRQGVGRLIRCES---DTGVVSILDPRAI-S-KSYSVKIGQALHK 731  Eubacterium siraeum 70/3
WP_020917169  754 ---------PFNDYSLPLAILKLKQAIGRTMRREK---QRSAVLLLDPRIL-T-KSYGRIINDALSE 806  Streptococcus lutetiensis
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