Conserved Protein Domain Family
IFT43

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pfam15305: IFT43 (this model, PSSM-Id:291951 is obsolete and has been replaced by 464631)
Intraflagellar transport protein 43
Intraflagellar transport protein 43 (IFT43) is a subunit of the IFT complex A (IFT-A) machinery of primary cilia.
Statistics
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PSSM-Id: 291951
Aligned: 18 rows
Threshold Bit Score: 80.5271
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A8HYP5       115 EDSKkFVGVSRRKQEQLARGDDE--V--SRKNLKYET-----------LTAGVd-GIMeIPELEE--EGRE-DLSNIVAE 175 Chlamydomonas r...
XP_009004614  41 gwadnSAKSSKFRRKAAEEIEDI--R--LKQQSLNGS-----------DCEGd--MPI-IPDLEE--VQEE-DFVLQVAA 99  white-tufted-ea...
NP_443105     71 sngTqTGKQQLDLNACYHKTHHR--D--LGLASLEEA-----------D------IPI-IPDLEE--VQEE-DFVLQVAA 125 human
XP_002613215  80 gpprpsrrqggwaddtgkEKKSA--R--LRSDSPPRR-----------DDSDEd-IPV-IPDLDD--VQEE-DMATQIAA 139 Florida lancelet
XP_011406124  18 EAPKhKSKKNAPDNDLTFEIEDE--R--LKQ-----------------DNEIEdfIDN-IPDLDE--MNEG-DLVSQVAA 72  Amphimedon quee...
XP_002901440  75 TSETkRGGRRRKGSEAPASGGER--R--NQKNRYFEE-----------DDETTd-IME-IPDLEE--EEREqDITTMVAE 135 Phytophthora in...
CBN74139      81 EAQKkSGGQKTTTQQKPIEGGSN--R--ANRRNHF-------------DNEETe-ILV-IPDLED--EGEE-DVETKVAA 138 Ectocarpus sili...
XP_004994190  12 wgdesKGKTTRRNRGESAPEEDE--R--LKMTVPVEE-----------DSDDd--IPE-IPELQDqvEEEE-DITTKVAE 72  Salpingoeca ros...
XP_006675833 195 asrrdrrgsrsgVPVANNDIDDE--KekVRKTTVAGPmtayaassrkmDDGDQv-MVI-IPDLMD--VEDE-DMSATVAV 267 Batrachochytriu...
XP_002682510  72 EDATsTKEQKGGRKLLGIFGKNStaN--VEKQTQQDNsylfqnvprplDVEDEe-GAF-IPSLDQ--VGGN-GMEGSVAE 144 Naegleria grube...
A8HYP5       176 APK-VRTNKVQGMEELEED----MHYK------LPAMDdrDIDLSLLTA-VLCSSEQVAEAEDPWDPDIVltEVASAINA 243 Chlamydomonas r...
XP_009004614 100 PPS-IQVKQVMTYRDLDND----LMKYs----aIQTLDg-EIDLKLLTK-VLAPEHEVREDDVGWDWDHLftEVSSETLT 168 white-tufted-ea...
NP_443105    126 PPS-IQIKRVMTYRDLDND----LMKYs----aIQTLDg-EIDLKLLTK-VLAPEHEVREDDVGWDWDHLftEVSSEVLT 194 human
XP_002613215 140 PPS-LQVNKIATYRELDTD----LFKQa----aFLILDd-EIDLKPLAK-CLSAETDVLEEDKPWDWDRLftEVTSELQV 208 Florida lancelet
XP_011406124  73 PPS-AAVQQITTYKQLDND----LAKHa----sLFTMDg-EIDLKALAQ-VISPESEIQEDDKVWEWDKLfaEVSHEIES 141 Amphimedon quee...
XP_002901440 136 APR-NTTRAVQSLKQLDKE----IKFAlp---sAQTh---GVDLHLLTS-GLCPERAVSEDDEPWDFDTLlnDIAQEIQK 203 Phytophthora in...
CBN74139     139 APQ-NTTRRVPSLRELDED----LKYa------IPSGAd-GLDMSLLTK-TLVPSEMLEEDDSPWEFDSLlqSVTQEFNA 205 Ectocarpus sili...
XP_004994190  73 APT-ANI-QMATMADLDKE----LSSTl----sFTQTDs-GVDLKLLIN-NLTPSHLLKEEDKEWDFVHVftEIKSELAA 140 Salpingoeca ros...
XP_006675833 268 APT-IKTKAMKTISEIESD----ISQSdavvnqLQHLSvpGIDMSILIRaALCPPSQLDELDQPWDWDLLftQVSSEIHA 342 Batrachochytriu...
XP_002682510 145 APEeYASQKVQTLQELDQStkatLHHFl----nMKYDDr-GLDLSLLTG-VLSYPLDELEQDDDWGNPQFvrDLLNSIKT 218 Naegleria grube...
A8HYP5       244 EREK 247 Chlamydomonas reinhardtii
XP_009004614 169 EWDP 172 white-tufted-ear marmoset
NP_443105    195 EWDP 198 human
XP_002613215 209 EWEa 212 Florida lancelet
XP_011406124 142 TWRQ 145 Amphimedon queenslandica
XP_002901440 204 DLDD 207 Phytophthora infestans T30-4
CBN74139     206 EKRl 209 Ectocarpus siliculosus
XP_004994190 141 EEEK 144 Salpingoeca rosetta
XP_006675833 343 EKEK 346 Batrachochytrium dendrobatidis JAM81
XP_002682510 219 TKKP 222 Naegleria gruberi strain NEG-M
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