Conserved Protein Domain Family
Caskin-Pro-rich

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pfam16907: Caskin-Pro-rich (this model, PSSM-Id:293512 is obsolete and has been replaced by 465308)
Proline rich region of Caskin proteins
This proline rich region is found in Caskin proteins. Caskins are CASK-binding synaptic scaffolding proteins. This region is predicted to be natively unstructured. Its function is not known.
Statistics
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PSSM-Id: 293512
Aligned: 15 rows
Threshold Bit Score: 77.1384
Created: 30-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005468608  955 QNKRAHTLNRYAVSDSECDERAGGRgggggegeadvvsqsstavRG-----EGGK-----YATVTHRVSRSHSVRNQ--- 1021 Nile tilapia
XP_006635403  922 PKKRSQSLTRYALSDGEPDEEEMAP-------------------TG-----NLAS-----YATLTRRPGRSQLVHLQag- 971  spotted gar
XP_004946434  987 NKKRSHSLNRYALSDGEHEEEEGMP-------------------TS-----TLGS-----YATLTRRPGRSQMPRAClq- 1036 chicken
XP_008102657  872 HKKRSHSLNRYALSDGETEEEEPP--------------------SN-----TVGS-----YATLTRRPGRSQVPRAQqm- 920  green anole
XP_005810016  885 QNKRSQSLNRYALSDGEPDEDDDLPl-----------------pSSsassvTMPP-----YATLSRRPGRAsg------- 935  southern plat...
XP_011486746  850 QKKRTQSLTRYALSDGEPDEDEDPAl-----------------sRS-----SASPsampsYATLSRRTPRApa------- 900  Japanese medaka
ETE69483      285 PKKRAHSLNRYAMSDSEQERDELM--------------------VP-----DAGP-----YATVQRRVGRSHSVRAQsg- 333  king cobra
XP_007237389  736 PKKRTQSLTRYALSDGEPDEEDDDElaq--------------pmAA-----ALPS-----YATLSRRPARGQLARLQsa- 790  Mexican tetra
XP_005069973  789 PKRRSHSLSRPGPAEGEAEGEAEGPv-----------------gS------ALGS-----YATLTRRPGRSTLARTSpsl 840  golden hamster
XP_007241170  547 PKKRAHSLNRYAVSDGEQEREELNV-------------------QD-----TGGK-----YATVQHRVGRSNSMKGQa-- 595  Mexican tetra
XP_005468608 1022 --EKG-ANRnqSQSFALRQKKKGPPPPPPKRSSSAISTSNSN 1060 Nile tilapia
XP_006635403  972 -pERN-VNR--SQSFAIRARRKGPPPPPPKRLSSVSGVVTSE 1009 spotted gar
XP_004946434 1037 -tEAK-VTR--SQSFAIRAKRKGPPPPPPKRLSSVSSTLTTE 1074 chicken
XP_008102657  921 -pADGkVSR--SQSFAIRARKKGPPPPPPKRLSSVSSAQAVD 959  green anole
XP_005810016  936 -pPRQ-VNR--SHSFAVRSRHKGPPPPPPKRMSSVSGSPTRQ 973  southern platyfish
XP_011486746  901 -tQRH-INR--SHSFAVRSRHKGPPPPPPKRMSSVCSSPSHQ 938  Japanese medaka
ETE69483      334 -aDKN-VNR--SQSFAVRPKKKGPPPPPPKRSSSAISSNNMa 371  king cobra
XP_007237389  791 -pEQG-VGR--SHSFAIRARRKGPPPPPPKRLssvssgntss 828  Mexican tetra
XP_005069973  841 tpTRG-TPR--SQSFALRARRKGPPPPPPKRLSSVSGPTEpp 879  golden hamster
XP_007241170  596 --DKN-VNR--SQSFALRQKKKGPPPPPPKRsssaisssssn 632  Mexican tetra
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