1B8K,1B8M,1B8M


Conserved Protein Domain Family
NGF

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pfam00243: NGF (this model, PSSM-Id:306704 is obsolete and has been replaced by 459728)
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Nerve growth factor family
Statistics
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PSSM-Id: 306704
Aligned: 29 rows
Threshold Bit Score: 145.913
Created: 12-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1B8K_A         6 SHRGEYSVCDSESLWVtDKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKE---------------------ARPv- 63  human
Q91988       149 MHRGEYSVCDSINTWV-NKTRATDMSGNEVTVLSHVTVNNKVKKQLFYETTCRSpthrssgiviggrsggrggkqGSKt- 226 southern platyfish
P34129        82 QHRGVYSVCESVSVWVgNKTKATDISGKEVTVLPYVNINNVKKKQYFFETTCH----------------------SPPs- 138 southern platyfish
Q9J5D9        71 tSEGIYLSCESSSTWVaNKTTVFDHRGNKLELLDQIVHNKQVYYQYLFETKCKEyp------------------------ 126 Fowlpox virus
P13600       128 FHRGEFSVCDSISVWVgDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR----------------------DPNp- 184 cattle
XP_006895739 130 FHRGEFSVCDSVSMWVgDKTTATDIKGKEVMVLKEVIINNVVYKQYFFETKCQ----------------------NPNp- 186 Cape elephant s...
ETE63701     131 HNRGEYSVCDSISVWVaNKTTATDIKGKPVTVMVDVNLNNHVYKQYFFETKCR----------------------NPNp- 187 king cobra
XP_015197626 121 LRRGEYSVCKSISTWVgNKTKATDIKGQEVSVLAEFNINNVVKKQYFFETTCA----------------------GNDs- 177 spotted gar
XP_003963333 147 MHRGEYSVCESINTWVgNLTQATDISENEVMVLPNVTINNVVKKQFFYETTCRSpthrgpgtanggkpggrsgkqATKa- 225 torafugu
XP_007234674 102 LHRGEYSVCDSENRWVgNLTRATDVAGNEVTVLPDVRINEVVKKQFFYETTCR----------------------VNKvs 159 Mexican tetra
1B8K_A        64 --------------KNGCRGIDDKHWNSQCKTSQTYVRALTSENNKlVGWRWIRIDTSCVCALSRK 115 human
Q91988       227 -------------gNSGCRGIDSRYWNSHCTNTDIYVSALTVFKEQ-TAWRFIRINAACVCVLSRN 278 southern platyfish
P34129       139 -------------gGSRCLGIDARHWNSHCTNSHTFVRALTSSENQ-VAWRLIRINVACVCVLSRK 190 southern platyfish
Q9J5D9       127 -------------aISGCLGIDTRFWSSYCSTSHSFVNSIVIKNGM-PSWEYIRIGTSCVCVVQLK 178 Fowlpox virus
P13600       185 -------------vDSGCRGIDAKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACVCVLSRK 236 cattle
XP_006895739 187 -------------vDNGCRGIDSKHWNSYCAPNYSFTRALTLDDRQ-TAWRFIRINTACVCVISRK 238 Cape elephant shrew
ETE63701     188 -------------vPSGCRGIDSRHWNSYCTTTHTFVKALTMEGNR-ASWRFIRIDTACVCVISRK 239 king cobra
XP_015197626 178 -------------gSSGCLGIDSRRWNSYCTNTHTFVRALTVDKKL-VAWRYIRINTACVCVLSRK 229 spotted gar
XP_003963333 226 -------------gNSGCLGIDSRHWNSYCTNTHIYVSALTLYQKR-TAWRYIRINAACVCVLSRK 277 torafugu
XP_007234674 160 gaprgrgasgikagTSGCRGIDNKHWNSYCTNTHTYVRALTSFKNQ-IAWRLIRINAACVCVLSRK 224 Mexican tetra
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