2V3N,2BB5


Conserved Protein Domain Family
Cobalamin_bind

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pfam01122: Cobalamin_bind (this model, PSSM-Id:307326 is obsolete and has been replaced by 460073)
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Eukaryotic cobalamin-binding protein
Statistics
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PSSM-Id: 307326
Aligned: 42 rows
Threshold Bit Score: 332.676
Created: 15-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2V3N_A         1 NICEITEVDSTLVERLGQRLLPWMDRLSQEqlNPSIYVGLRLSSLQAGAKEAHYLHSLKLSYQQSLlrpasnkddndsea 80  cattle
Q5XWD5        24 SSCSVPQAAQHLVDGLQVLLEDSVSSAAPP--NPSVLIAMNLAGALSAEARELLADRLGASDSAGL-------------- 87  dog
XP_012899992  24 SSCSVPPAQQPLVHGIQVLMENSVTSSAYP--NPSILIAMNLAGAYDMEAQKFLTDKLMASDSAGE-------------- 87  domestic ferret
XP_002929703  24 SSCSVPLAQQSLVDGIQVLMENSVTSSAHP--NPSVLIAMNLAGAYNVEAQKLLTDKLMASDTADL-------------- 87  giant panda
XP_003419425  24 SSCSVPSAQQPLVNSIQVLMESSVTSSDFP--NPSILIAMNLAGAYNLEVQKLLTDELMASDTNNL-------------- 87  African savanna...
XP_508453     24 SSCSVPSAQEPLVNGIQVLMENSVTSSAYP--NPSILIAMNLAGAYNLKAQKLLTYQLMSSDTNDL-------------- 87  chimpanzee
EHA98776      24 SSCSVPSGEQPWVDNIQVLMEDSVMPSTLP--NPSVLIAMNLAGPYNLEAQEDLTNELESSDTADL-------------- 87  naked mole-rat
XP_003464282  24 SSCSVPSEEEPWVDRIQVLMENSVTRSSYP--NPSILIAMNLAGPYNVEAQKLLTEELVASDTADL-------------- 87  domestic guinea...
NP_001193168  24 SSCSVPSAEQPWVDGIQVIMENSVINSTSP--NPSVLIAMNLAGAYNVEAQKLLTFDLMASDTADL-------------- 87  cattle
XP_003122730  32 SSCSVPSAEQPLVNGIQVLMEQSVTSSAFP--NPSILIAMNLAGAYNTEAQELLTYKLMASNTSDL-------------- 95  pig
2V3N_A        81 kpSMGQLALYLLALRANCEFIGGrkgdrL--------VSQ--------------LKRFLEDE----KRAIGHNHqgHPRT 134 cattle
Q5XWD5        88 --SVGQLALTIMALNSSCRDPGN-----K--------VSV--------------LYGQMEAW----PPSSp----sAPAW 130 dog
XP_012899992  88 --KSEP--FY-TLPDSPGSDPNF-----TfphtpvppVIIpespkhlslctwneRFVKSEHLlilqRPSAPFPGprAPAS 157 domestic ferret
XP_002929703  88 --TIGQLALTIMALNSSCKDPGN-----K--------VSI--------------LQRQMETW----PPSSp----dAPAP 130 giant panda
XP_003419425  88 --TAGQLALTIMALNSSCQDPEN-----D--------VSL--------------LQKQMENW----APSSs----nAGVL 130 African savanna...
XP_508453     88 --TIGQLGLTIMALTSSCRDPGD-----K--------VSI--------------LQRQMENW----APSSp----nAEAS 130 chimpanzee
EHA98776      88 --TTGQVALTIMALNSSCRNPGS-----K--------VSD--------------LQREMESW----SPPAp----rEEAT 130 naked mole-rat
XP_003464282  88 --TMGQLALNIMALTSSCRDTAS-----K--------VSV--------------LQREMQRW----TPPGp----rEEAV 130 domestic guinea...
NP_001193168  88 --TAGQLALTIMALTSSCRDPGD-----K--------VST--------------LRTQMENW----TPSSl----gSYAS 130 cattle
XP_003122730  96 --TTGQLALTIMALTSSCRDPGN-----R--------IAI--------------LQGQMENW----APPSl----dTHAS 138 pig
2V3N_A       135 SYYQYSLGILALCVHQKRVHDSVVGKLlyaveHKPHLLQDH-VSVDTMAMAGMAFSCLELS---NLNPKQRNRINLALKR 210 cattle
Q5XWD5       131 TFYGPSLAVLALCQEHPGRALPVAARL-----AKILAAGLSpFNTDTGAMVTLALTCMYNKipeGSEEGYRTLFSQVLKD 205 dog
XP_012899992 158 NFYGPSLAVLALCQENPTRALPIAARF-----AKILRFGSSpFNTDTGAMATLALTCMYNKipeGSDEGFKILFSEVLQE 232 domestic ferret
XP_002929703 131 TFYGPSLAVLALCQENPKTALPIAARF-----AKILRFSSSpFNMDTGAMATLALTCMYNKipeGSEEGYRILFSQVLEE 205 giant panda
XP_003419425 131 SFYGPGLAILALCQKNPEATLPIAARF-----AKSLMANLSpFNTDTGAIATLALTCVYNKipaGSEEGYRNLFGQVLKY 205 African savanna...
XP_508453    131 AFYGPSLAILALCQKNSEATLPIAVRF-----AKTLLANSSpFNVDTGAMATLALTCMYNKipvGSEEGYRSLFGQVLKD 205 chimpanzee
EHA98776     131 AFYSPGLAILALCQKNSEATLPIATIF-----AKALLANTSpFHVGTGAVATLALTCMYNKtpvGSGDSYRNLFSQVLKR 205 naked mole-rat
XP_003464282 131 AFYGPSLAVLALCQKNSEATLPVAAGF-----AKALLANTSpFDVDTGAVATLALTCMYNRtpvGSGYSYRTLFGQVLKS 205 domestic guinea...
NP_001193168 131 TFYGPSLAILALCQNNPETTLPVAARF-----AKTLLASSSpFDVDAGAVATLALTCMYNRipvGSEEGYRALFAQLLKK 205 cattle
XP_003122730 139 TFYEPSLGILTLCQNNPEKTLPLAARF-----AKTLLANSSpFNMDTGAMATLALTCMYNKipvGSEEGYRALFSQVLRN 213 pig
2V3N_A       211 VQEKILKAQTPEGYFGNVYSTPLALQLLMGSLRPSVElgTACLKAKAALQASLQHKTFQNPLMISQLLPVLNQKSYVDLI 290 cattle
Q5XWD5       206 VVENISMRIKDNGIIGDVYSTGLAMQALSVTPEPPNKe-WDCKKTMDTILKEIEQGKFHNPMSIAQILPSLKGKTYLDVP 284 dog
XP_012899992 233 VVKNVSMRIKDNGIIGDIYSTGLAMQALSVTPKQPNKe-WNCQKTMDTILQEIEQGKFHNPMSIAQILPSLKGKTYLDVP 311 domestic ferret
XP_002929703 206 AVKNISLRIKDNGIIGNIYSTGLAMQALSVTPKQPNKe-WNCQKTTDTILTEIKHGKFHNPMSIAQILPSLKGKTYLDVP 284 giant panda
XP_003419425 206 IVDDISTRIEDNGIIGNIYSTGLAMQALSVTPVQPNKe-WDCKKTMDTILNEIQQGKFHNPMSIAQILPSLKGKTYLDVP 284 African savanna...
XP_508453    206 IVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPPKKe-WNCKKTMDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVP 284 chimpanzee
EHA98776     206 IVENISMRIKDNGIIGNIYSTGLAMQALSVTPVQPAKk-WDCEQTMTIVLDEIKQRKFQNPMSIAQILPSLKGKTYLDVP 284 naked mole-rat
XP_003464282 206 IVENISRRVTDSGIIGDIYSTGLAMQALSVTPEQPSKk-WDCEKTMATVLDEIKQGKFQNPMSVAQILPSLKGKTYLDVP 284 domestic guinea...
NP_001193168 206 IVEDISTRIRDNGLIGDVYSTGLAMQALSVTPERPNKq-WDCQQTMDTVLDEIKEGKFQNSMSIAQILPSLKGKTYLDVP 284 cattle
XP_003122730 214 TVENISMRIQDNGIIGNIYSTGLAMQALSVTPERPNKe-WDCQKTMDTVLTEIKEGKFHNPMAIAQILPSLKGKTYLDVP 292 pig
2V3N_A       291 SPDCQAPR--ALLEPAL-ETPP 309 cattle
Q5XWD5       285 YVSCSPGHqvQPTLPSQpSPVP 306 dog
XP_012899992 312 HVSCSPGVevQPTLPTQpSPVP 333 domestic ferret
XP_002929703 285 HVSCSPGHevQPTLPNQpSPVP 306 giant panda
XP_003419425 285 HVNCSPDHevQPTLPNEpSTVP 306 African savanna elephant
XP_508453    285 QVTCSPDHevQPTLPSNpGPGP 306 chimpanzee
EHA98776     285 HMTCRGDQgvPPTVPTYpIPVP 306 naked mole-rat
XP_003464282 285 HVKCGSDQvtPPSDPIFpSPAP 306 domestic guinea pig
NP_001193168 285 QVSCSPDQevQPTQPNFpSPVP 306 cattle
XP_003122730 293 HVSCSPGHevPPTLPNHpSPVP 314 pig
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