2K8D,3E0O,3CEZ


Conserved Protein Domain Family
SelR

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pfam01641: SelR (this model, PSSM-Id:307664 is obsolete and has been replaced by 460278)
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SelR domain
Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidised methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.
Statistics
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PSSM-Id: 307664
Aligned: 977 rows
Threshold Bit Score: 98.5733
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2K8D_A        27 EWREILDPEAFRVARKAGTEPPFTGKYHDLH-D---DGIYRC-ICCGTDLFDSETKFDSGTGWPSFYDVVSEHN---IKL 98  Methanothermoba...
Q83C28         2 dKRSSLPPIVRHITCDQMTEPAFQGEYTDLK-E---TGRYLC-RQCGIALFRSQDKFHSGCGWPSFDATIAG-T---IKR 72  Coxiella burnetii
Q5ZRH4         6 dkTASLTPAIKRIVCDKATEYPHTGSYNQVA-T---HGTYLC-RRCGLALFRGVSQFSSGCGWPSFDDEIAN-A---VAR 76  Legionella pneu...
Q5NFW2         2 lkTKSLTPHEYDIIINKATEKPFTGRYNDLD-Q---KGVYIC-RNCGTPLFRADSKFISACGWPSYDIHIDN-N---VKQ 72  Francisella tul...
A0CJS4        29 ldrlSMDPHHYWIAVGKGMERPFTGEFCNHE-Q---QGVYQC-YHCKITLFQSDTKYQAQTGYASFFQHHKN-S---VKI 99  Paramecium tetr...
A0C017        15 vdrLALTPHQYWIAAGKGMERPYTGEYWFNQ-E---VGTYHC-QHCDNQLFSFDSKYKSTTGYAQFWNHIPN-S---VKL 85  Paramecium tetr...
WP_025386648   9 dktgSLIPAARRIICDKATECPHTGAYNTVR-S---SGSYLC-RRCGLALFRADSQFSSGCGWPSFDAEISQ-A---VKE 79  Legionella oakr...
XP_002179407   4 MWRGLLTREEFRVLRSHGTERPRSHRYDTWYpD---TGCFAC-RACGLPLYAARAKFDSGSGWPSFGTHVQG-A---VAT 75  Phaeodactylum t...
XP_009033206  21 EYKAKLTGSQYRCLRQGGTEAYRRGEFCNFFpE---DGYMACgAACDIPLYSAKSKF-ADPGWDAYASCYWTGStchVGV 96  Aureococcus ano...
XP_009038733  91 ELAKTLDAEAVRCLRAHGTEPAGTGEYNAFE-PpggRGRFDC-RACRFPLYHASRKFA-DQGWIAFDQCFFTGD---VAH 164 Aureococcus ano...
2K8D_A        99 REDRS-LGMVRCEVLCARCDAHLGHVFD-DGPRP------T-GKRYCMNSAALKFI 145 Methanothermobacter thermautotrophicus ...
Q83C28        73 LPDPD---GQRIEIRCERCGAHLGHVFE-GEALT------PkNTRYCVNSLSLDFV 118 Coxiella burnetii
Q5ZRH4        77 KPDAD---GQRTEILCARCDAHLGHVFT-GEYMT------YkNLRHCVNSASLDFV 122 Legionella pneumophila subsp. pneumophi...
Q5NFW2        73 LPDAD---GRRTEILCNNCDGHLGHIFHgEGYTK------L-NTRYCVNSACVDFI 118 Francisella tularensis subsp. tularensis
A0CJS4       100 IETKE--KFRYSALQCMNCQSYLGQISK-DGPPP------T-FLRYSINSGALKFY 145 Paramecium tetraurelia
A0C017        86 E--ES-NIKEERDLCCAGCDSFVGKVSF-DGPPP------T-FIKYSINSAALNFK 130 Paramecium tetraurelia
WP_025386648  80 IPDSD---GKRIEILCNRCHGHLGHVFT-GEYLT------AkNRRYCVNSASIDFV 125 Legionella oakridgensis
XP_002179407  76 TVEQSpVMGKRVEIHCARCQSHLGHVFA-DTNTAkwdrlkTfSERHCVNGISLMYs 130 Phaeodactylum tricornutum CCAP 1055/1
XP_009033206  97 RPD-----GSALENFCNNCGSHLGHVFFrDPHSPa-----PtKERHUVNSCCTKYV 142 Aureococcus anophagefferens
XP_009038733 165 VGLAA-GNMDSIEVHCSNCRSHLGHVFT-DGVs---------GERHULNSCCVAYV 209 Aureococcus anophagefferens
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