Conserved Protein Domain Family
ATG_C

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pfam09333: ATG_C (this model, PSSM-Id:312735 is obsolete and has been replaced by 462761)
Autophagy-related protein C terminal domain
ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm-to-vacuole targeting and in autophagy.
Statistics
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PSSM-Id: 312735
Aligned: 121 rows
Threshold Bit Score: 38.2595
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P0CM30       1840 ISRYADQPESMKEGVQAAYKSLSKNVNAAAQTILAVPMEVYER-S-GDDG-PLKAVIRAVPIAVLKPMIGTTEAVSKTLL 1916 Cryptococcus ...
Q54T12       1621 QSIWTSQPENLTEGAKKGMSKIFGGFYNGVKGVI-DPFS--QS-T-GPIN-FLNNMFWAVPGLLVNPILGISDGITFFSL 1694 Dictyostelium...
XP_002982609  188 daRRKFQPSDTREGFQQAYESLAQGLERTAISLVGNPVKVYQR-G-GGAGeALANAIKASPAAILAPASATADAVRHAFL 265  Selaginella m...
XP_006829728 1911 tNVRANQPKDAQEGIRQAFESLTHGLGRTASALVGTPLKAYQR-GaGAGT-ALVGAVRAAPSAIVAPVSAAACAAHCALL 1988 Amborella tri...
XP_004353925 1443 nSIWVSQPENLSQGAHKAMSQVIGGFYNAAMGILSKPITSYQE-S-GTKG-FLTSLLWGVPGVVVSPMVGLAEGFTSFSI 1519 Dictyostelium...
XP_011477394  294 REAINRQPSGLKEGLARGGKGLVSGFVSGITGIVTKPIKGAQK-E-GAVG-FFKGCGQGLVGAIARPTGGIVDMASSTFQ 370  Japanese medaka
EFA85868     1230 sltRQQQPDSISQGAQRAVSQVFGGFRNAAMGILYKPIENYKS-D-GAKG-FLSALLWGVPRVVVDPVVGVAEGFTTFST 1306 Polysphondyli...
XP_012827077 2958 REAMNKQPSGIREGITRGGKGLVSGFVSGITGIVTKPIKGAQK-E-GAAG-FFKGVGKGLVGAVTRPTGGIIDMASSTFQ 3034 western clawe...
XP_010315233 1877 TSVRFNQPRDSRQGIQQAYESMSDGFSKSASALIRTPIKRYQRgA-GMGS-AFATAVQAAPAAAIAPASATARAVHCALL 1954 tomato
XP_013749339  514 TNVRHNQPRNAKQGMRQACENIGDGIGKTASALVRTPLKKYQRgD-GAGS-TFVTVVQGVPTAAIAPASACVRAVHSALV 591  rape
P0CM30       1917 GMRNSLDPSARRelDDKYK 1935 Cryptococcus neoformans var. neoformans JEC21
Q54T12       1695 GLRNSLDYTKIEmeRKKFK 1713 Dictyostelium discoideum AX4
XP_002982609  266 GVRNGMDPDRKRefDEKHR 284  Selaginella moellendorffii
XP_006829728 1989 GMRNSLDPELKKesIEKYs 2007 Amborella trichopoda
XP_004353925 1520 GLRNSLDSSRIVndHKKYK 1538 Dictyostelium fasciculatum
XP_011477394  371 GIKraaeasqnveslrppr 389  Japanese medaka
EFA85868     1307 SIRNSLDSSRIIneRKKYK 1325 Polysphondylium pallidum PN500
XP_012827077 3035 GIKKATd------sSDDVe 3047 western clawed frog
XP_010315233 1955 GVRNSLNPERKKesLEKYl 1973 tomato
XP_013749339  592 GIRNSLDPEHKKesMEKYl 610  rape
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