Conserved Protein Domain Family
MMS22L_C

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pfam14911: MMS22L_C (this model, PSSM-Id:317336 is obsolete and has been replaced by 464367)
S-phase genomic integrity recombination mediator, C-terminal
MMS22L (Methyl methanesulfonate-sensitivity protein 22-like) is found in yeast, plants and vertebrates, and is integrally concerned with DNA forking and repair mechanisms during replication. MMS22L complexes with TONSL and this complex accumulates at regions of ssDNA associated with distressed replication forks or at processed DNA breaks. Its depletion results in high levels of endogenous DNA double-strand breaks caused by an inability to complete DNA synthesis after replication fork collapse. Thus the complex mediates recovery from replication stress and homologous recombination in vertebrates, yeasts and plants. This family is the more C-terminal region of the proteins.
Statistics
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PSSM-Id: 317336
Aligned: 22 rows
Threshold Bit Score: 350.042
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0IEY5        711 EQLTELSQVVLGLSEFRSL-CDIPSHDliDEGEEP---IGLFFKFVGKKFKECEN---NSaMQ---FDLKNKMHVLFQQF 780  yellow fever ...
E1C2Z0        850 EQLTEMTRLIFKLKEVESI-LSKARVEepVLKQDPknaLVQFIKAVGRTYSGLQT---LP-EK---SAMVLKALEYLGDV 921  chicken
XP_002075514  752 EVVVALTQHISQLEEFRQLqLEPASLQ---ASREP---LCSFFRALGQRVQHQEEsegLH-MR---MQYSHKLHAYVYHF 821  Drosophila wi...
ETN62517      714 qELRDLTRIVYRLNEFRVL-CDIPEYDllETDAVP---MHLFLRYIGKRFRETHD---GN-EQ---LQLKMRLHHLFQHF 782  Anopheles dar...
XP_001843854  718 EQLVELSRVVCGLGVFQEI-CSIAEVDlcEGKDDL---MGLFFKALGDKYNEKDS---RG--Q---LEMSLKVNALFNQF 785  southern hous...
XP_016661939  720 netmTITQFVSNISEIKEL-FKNSGNDl-ETSVDP---FITFLDLLSIKYHHNQD---VK-FR---QKMSEKVSDYFYSI 787  pea aphid
XP_002433840  197 DQMTRLSGMVLELKELNQL-L-LGTLTrpDGGESHdvfVTRLFTSVAEASDILSD---VG-DTegtTRLQQTLALYLQDF 270  black-legged ...
XP_008117433  796 DQLVELTRLILKLPEVEAV-FSKAHVNvpVCRQDPkeaVIQFVKAFGKNYSSLQT---LA-EK---STTVTKALEYIGDV 867  green anole
XP_002011235  744 EAVLALNPFVIQLEEVCALgLDADSLA----DREP---LCAFFGALGRRAQQQEA---LAhVR---MQLSHKLHAYVAHF 810  Drosophila mo...
NP_001284794  728 ESVLALMPHVTQLEEFRLLaIDPTSLE---GGREP---LCAFFGALGRRAQQEEA---AAhVR---MQLSHKLHAYVNHF 795  fruit fly
Q0IEY5        781 DKWIP------NpnVALLKRILSVLALALKECGPVVyIRNNSTCLYHLAVNHYFLPMTVLTDRN-VSNELVLAMGKMWFR 853  yellow fever ...
E1C2Z0        922 LKYVKpylkakGp-PEGLQLAYWIIGCLVKFWAPIL-ATSKAQQLLFRIIDCLLLPHSVLQQDKeLPGALLSAIQESLHL 999  chicken
XP_002075514  822 EQWLPpdr----lrSELGSRFFSFLAIVIYNCPTLSyVRSKPSCFFHLAMVRFLLTTQLQAGTP-PEPRLPQIVHKIFPV 896  Drosophila wi...
ETN62517      783 DRWIPep------tgIVRQRILSVLVLALKECDQAFyIRSNPSCLYHLAFQQYFLPVSVLTDRQ-LAADYVEDMARVWHR 855  Anopheles dar...
XP_001843854  786 DAWFPsp------ttGLLIRIISMLVVAIKECGQVIyKRGNSACLLHLAFSKFFLPSSVLTNRN-VPNDLVLAMGKVWHR 858  southern hous...
XP_016661939  788 KIWVNilikqhKq-NDEIYRLYMVIGYVFEKISPLIyVKGKPNTILQELLDSMLLGVNLRSPNTkMHPSVITALLSSLHR 866  pea aphid
XP_002433840  271 VVTVAgvlkssSatSAALQNVYAICGQLFKHCSTLLyTKGLSGCLLPQLLDCLVVPSVVHA-KKpLSQAHLMALKHQLPQ 349  black-legged ...
XP_008117433  868 LKHVKpylmkkGp-AEGFHLSYRIIGCLVKSWAPIL-ATTKAQPLLFRIIDCLLLPHAVFQQDKgLPAAMLSAIRENLPL 945  green anole
XP_002011235  811 DQWLApqsrqeRp--ELGARFYNFLAIVIYNCPTLCyVRSKPSCFFHLAMVRFLLTTQLQAGVA-PEGRLPQLLHKIFPV 887  Drosophila mo...
NP_001284794  796 ELWLPpd--rsRs--ELGSRFYSFLAIVIYNCSTLAyVRSKPSCFFHLAMVRFLLTTQLQAGVP-PEGRLPQVVHKIFPV 870  fruit fly
Q0IEY5        854 IMDAM---GQMDYEIDPVLSDHVTNMIVKWAPQFLKFKEK--KDIARPYVMFIs--SLNEP-------FITFAVNRYLLS 919  yellow fever ...
E1C2Z0       1000 YLQGLsfiCCQSQARGAYLNQLLGSIVQQYFGRFLPPSPTalGAGQHPMLTAL---CSSITvpq-alrLRKTTLHVINEH 1075 chicken
XP_002075514  897 LLQGI---GRLSYTSDTYLGKTLEQLIHHWTPHF--SFTTnvKLVARPYSILLqadNDGE--------LAQYVLNQLTSQ 963  Drosophila wi...
ETN62517      856 VMDVL---SRMAYQSDSVIGDRVINMLTKWLPQFAKLPSKapREMVRPLMLFFcgsGSNEA-------LVSYAMPRVAST 925  Anopheles dar...
XP_001843854  859 IMDVL---GQMSYLEDPVIGDYAAKMMPKWAPQFLKFKTN--ADAVKPFLVFFt--SRNEA-------FVKFALNKYLAY 924  southern hous...
XP_016661939  867 YFIGL---FRLNPKTDLYIARCLRELISLYFPKILVGIKSsdEL---PLLKFFeekPDNEIp------ERALLLELLVST 934  pea aphid
XP_002433840  350 FLDGL---LSFRIRLDPYLLRRVKDIITHYLSLFSLTQSAiyNTGPHPLLVVLdtgAGSRAsqk-relYVSLLLDCICDN 425  black-legged ...
XP_008117433  946 FVQGLsfiCCQSQTQGAYLNQLLGNVIQQYLGRFFPSSSSasRTGQHPILLAM---CSSPTnmlgalhLYKITMQVISEN 1022 green anole
XP_002011235  888 LLQGI---GRLPYRTDAYLSRTLEQLVLHWTPHF--GFSSnvKLVARPYATLLqadSDGEL--------AHYVLQHLANQ 954  Drosophila mo...
NP_001284794  871 LLQGI---GRLPYRTDAYVAKTLEQLVQHWTPHF--SFSSnaKLVARPYATLLqadVDGEL--------AQFVLQLLVTQ 937  fruit fly
Q0IEY5        920 YVELDQMGapKPNAETGLTLLLYTLEVLHDIqdngKIAFFIRl----tATSIMDHATKCHDVypsKAVAVNIIFKML-DC 994  yellow fever ...
E1C2Z0       1076 YMQFKGSAp-PPRLASVLAFILEVLQRTQASel-cDVELV--------LPAVLKCMVLVNELq-vKKISTVIVQYMVqGC 1144 chicken
XP_002075514  964 FLAVQRRKa-GTHAGLIITLLQQLMEGLNVEqe-rELLTLLRa----iHSPLLEHIMFVDELehsRGQVLAIYRILVsLP 1037 Drosophila wi...
ETN62517      926 FVELQRCLp-KPNALPVMRMLQWLLQELIASadyaKVALFVRl----lGLPIVMHAVMCSASqptRGIATTLVYDMV-AS 999  Anopheles dar...
XP_001843854  925 YVELNGAAp-KLQAEIGLKLLTFLLEALNNAqdngKIAMFIGi----vAPATLEHALLVHDQslsKPVANELTSLML-TS 998  southern hous...
XP_016661939  935 FLSKRHRTp-DSSIAQVLEYINSIIKISHNNklviLS--IIQh----tLTRICSVSMFCEETnicKRITNEIINTFInLS 1007 pea aphid
XP_002433840  426 FIPKKGVA--HAHFGQGIRFIQEVVKRVRPTqneySS--IIKa----lLPALFENLLNSSTD---AKLCRELVTQILrDS 494  black-legged ...
XP_008117433 1023 YLQFKGHAp-PSNLAPTLAFILEALRKTKTTem-yEVDVF--------LPPVLKCLLLVNEPl-vKKLSTEILQCVVeGC 1091 green anole
XP_002011235  955 FLAVQRSQa-GTHVGLILTVLQQLFVGLDDLelgpEAEAQLLtllravHVPLLEHVMFVGELepsRVQVLSLYAVLVnLS 1033 Drosophila mo...
NP_001284794  938 FLVVQRRRa-GQHAGLVITIMQQLIESTGK-----EQEEQLLtvlrgvHIPLLEHVMFVDEVdlsRNQVFGLYKVLIsHD 1011 fruit fly
Q0IEY5        995 TRSSSNLVKLELRNSLASYTKRHLPVETGYYFRFMSKLAEKNPEFIQSMISTIREELIDTERLRGGKEDKHLRRLLFQLE 1074 yellow fever ...
E1C2Z0       1145 QARSGGEHATQLTSVFRQFIQDYTAVYDHRVFSILETVAVLDQTLVTSLIPTLTQSLKDSEYKQGLGRNAAQREAYKRLL 1224 chicken
XP_002075514 1038 VFKSSTKAKEICSSVVCSLAKKHLAHCTYFYFQMLIKLAEQAPELVRPLLPFVKQEAEMVELKRGAGEDVGIRKCLQRLQ 1117 Drosophila wi...
ETN62517     1000 TSGPSNVVRDEMRTVLANFTRKYLPIAADTYFVFMCRLADRNPLFIRSLIDTVREELLQAERLRGTGTDSFLRKSLYRLE 1079 Anopheles dar...
XP_001843854  999 TQNGSNLIKMELKSALASFTKKHLRINTSNYFRFMYKLADQRPEFIESLISTIRLELTETERLRGNGEDQHLRRMLSQLQ 1078 southern hous...
XP_016661939 1008 VSQSNEEIKNEVMSSLNTLCEEHLAFSSKLIFEFFDYMITISPDFVTCFLPKLVSHIEKVEWKRGIGSDFTLRKGLGRIQ 1087 pea aphid
XP_002433840  495 KDKLGAGEHESLEEALSSFVGRNLAWSTSGVFRLLHDVATLHPRLVADAMSKITVAAQDVERKRGGGSDAAIRKNLSDLL 574  black-legged ...
XP_008117433 1092 QARSEGEFATQLTSVFRQFIQDYTTVYGNQVYSILEAVAVLDQSLVISLIPAMTEALRNSEYKQGLGRNTLQREAYKRLL 1171 green anole
XP_002011235 1034 QFQRSAAARDICSTDIRNLAEKHLAHCTYFYFQMLIKLAERAPQLVAPLFGFVREQAHSVELKRGAGEDVGIRKCLQRLQ 1113 Drosophila mo...
NP_001284794 1012 AYKRSQAVRDMCSNHLRSLAEKHLAHCTYFYFQMLINLAELAPDLVAPILSFIREQAEQVELKRGAGEDVGIRKCLQRLQ 1091 fruit fly
Q0IEY5       1075 GAV 1077 yellow fever mosquito
E1C2Z0       1225 THL 1227 chicken
XP_002075514 1118 QVF 1120 Drosophila willistoni
ETN62517     1080 GAV 1082 Anopheles darlingi
XP_001843854 1079 GAV 1081 southern house mosquito
XP_016661939 1088 IKL 1090 pea aphid
XP_002433840  575 SHI 577  black-legged tick
XP_008117433 1172 SQL 1174 green anole
XP_002011235 1114 QVL 1116 Drosophila mojavensis
NP_001284794 1092 KVL 1094 fruit fly
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