2KR0


Conserved Protein Domain Family
RPN13_C

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pfam16550: RPN13_C (this model, PSSM-Id:318700 is obsolete and has been replaced by 465170)
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UCH-binding domain
RPN13_C is a family of all-helical domains that forms the binding-surface for the proteasome-ubiquitn-receptor protein Rpn13 to UCH37, one of the three de-ubiquitinating enzymes of the proteasome.
Statistics
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PSSM-Id: 318700
Aligned: 59 rows
Threshold Bit Score: 57.6386
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2KR0_A        278 MNVPAGPAGGQQVDLASVLTPEIM--APIL-ANADV-QERLLPYLP----SgEslPQTA----DEIQNTLTSPQFQQALG 345 human
Q22XT3        198 YQQRQ----RDTPNFFEVLTKESL--MELA-NDEEV-QKELIQHLP----E-G--QQDV----QNLKENLISPQFQQALE 258 Tetrahymena th...
Q5CS28        129 MNNNNNN--KRRISLSEILTSEII--NELK-QDQDL-IEELKEHMP----S-N--QRNL----QDINSVINCPQVKYTMR 191 Cryptosporidiu...
28_pfamImport   7 FQQLAQ---PKPVSLTKLLSADNM--SSIL-DDPAC-VEALLPHLP----E-G--SQTP----AELRATLRSPQLRQSIG 68 
32_pfamImport   7 IQSLTA---PKSIKLSKLLSAENL--ASLL-SDENA-VQTLIAHLP----E-G--AQNA----YELQATLHSPQLRQSIA 68 
ELU44038      154 LQGHSRAGVAPDVALSDILTPSIL--ATVL-QDSEV-VNSLTQFLPvellSsP--YATQvplqEVMKQTVASAPFRSSVR 227 Rhizoctonia so...
XP_002184709  251 qQQTGAATPTVGPPLDQVVTPQAM--DRLM-DNEAA-RGRLVALLP----E-G--QQTP----EALRENLRSPQIQQTLR 315 Phaeodactylum ...
CEL69122      285 LRRARGHSQPTATPLNEVLSSQTL--SRIA-DDEEA-VHELVGLMP----E-G--CRTE----GDVREALRSAQLAAPMS 349 Neospora canin...
XP_007415163  174 FSATGQQSRRPPYALTDILTLDAI--GPLLeSDPDLlMSQLAPHLP----PdI--EATA----ANVKQIVNSADFRNGVR 241 Melampsora lar...
CBJ30752        4 IAGLAPQRRQPALSLRDAVDADAIeaSGFL-DDPEV-QEALLPLLP----E-G--NQTA----EELRETIRSPQLQQSLS 70  Ectocarpus sil...
2KR0_A        346 MFSAAL------As----GQLGPLMCQFGLPA----Ea---VEAANK-GDVEAFAKAM 385 human
Q22XT3        259 SLEKAL------Ns----NEGGAVLASLGLDQ----S----NFMETL-DGSDSFYKAI 297 Tetrahymena thermophila SB210
Q5CS28        192 LLDESI------Ys----EQIFTLSTALGLDI----Nf---DSLINK-NPMQVFINAL 231 Cryptosporidium parvum
28_pfamImport  69 SLVSAL------Qt----GNFNAVMANFGLDP----Sag-aAKLAFG-DGVGALLAAI 110
32_pfamImport  69 SLMQAL------Qt----GNYNAVLTNFGLDP----Aag-aAKLAYG-DVVGAFLAAI 110
ELU44038      228 SLDQAL------St----GLLGGLVTSLGMPV----Ea--------G-LGIHPFLEAI 262 Rhizoctonia solani AG-1 IA
XP_002184709  316 ALTQALlpddegNt----DGFYSVLANFQLDP----AhgqdALTQHN-NPIQAFLDAL 364 Phaeodactylum tricornutum CCAP 1055/1
CEL69122      350 GLTQAI------Yt----NS-APLLSSMGVTA----Ed---RAAATSpDAMMAFAQAL 389 Neospora caninum Liverpool
XP_007415163  242 TLDVAL------QknlgdGLKMFFLHGLGLES----Gy---E-------GVEEYIEAv 279 Melampsora larici-populina 98AG31
CBJ30752       71 SLSRAL------Rs----DNFNNIMSSFELDPsnprSa---EAMARG-DGVEAFVQAL 114 Ectocarpus siliculosus
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