Conserved Protein Domain Family
DUF5401

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pfam17380: DUF5401 (this model, PSSM-Id:340095 is obsolete and has been replaced by 375164)
Family of unknown function (DUF5401)
This is a family of unknown function found in Chromadorea.
Statistics
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PSSM-Id: 340095
Aligned: 2 rows
Threshold Bit Score: 1216.21
Created: 9-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P46504     22 VIFTSERCNRVTYGLRTVNGDPSRYKQCGPSGRVWIVPCAPQMTFDPEDRVCKERLDSR-IVKPMRKYETS-RTIITTPA 99   Caenorhabditis el...
CAP28691  205 VIFTSERCNRVTYGLRTVNGDPTRYKQCGPSGRVWIVPCAPQMTFDPEDRVCKERLDSRtAHKPMRKYETPpKTIITTPA 284  Caenorhabditis br...
P46504    100 PIPSSYPVSAEVIAPGAPAashAAPEEFVFSTIRPKSRKPKAKTRGKFRKTTTAMIQTTt-----pMTVESFESMEMTTT 174  Caenorhabditis el...
CAP28691  285 PIPSSYPVSAEVTPASAPV---AAPEEFVFSTIRPKSRKPKARTRGKLRKTTTVMSTTPsttpmsmEIQKSSGEDEMTTT 361  Caenorhabditis br...
P46504    175 PKIVIFASKKNMNNTNRSGESRTQlIRNRNRERGNAPAFTRPGRVRTTTPMSVTHATRFVPGIQHKVTVaPKEVQGMPHT 254  Caenorhabditis el...
CAP28691  362 PRIVIFASKKNSLGGNKSEEMRNQ-NQSVQRGRGVSAAFTRPGRIRTTTPMPVTHATRFVPGIQKITVA-PKENQGMPHT 439  Caenorhabditis br...
P46504    255 LAPYEKMDRRPDSFGV-EELTTMTPEYTVRYNGQTMTENEFLNQLLHIVQHQKTVSERQQQEKFEKMEQERLRQEKEEKA 333  Caenorhabditis el...
CAP28691  440 LAPYEKTERRGESFETgESMTTMTPEYTVRYNGQTMTENEFLNQLLHIVQHQKSVSERQQQDKFERMEQERIRQEKEEKL 519  Caenorhabditis br...
P46504    334 RELERRRKLEESETARQAELDR----------------QATIYAEQERMAMERNRELERIRLEEKKRENERVRQEEIAME 397  Caenorhabditis el...
CAP28691  520 REMERRRQLAEAEKARQAEIDRvswgvfatggnlnyfqQAAIYAEQERMAMERERELERIQQEERKREMERIRQEEIAME 599  Caenorhabditis br...
P46504    398 ISKIRELERLQLERQRKNERVRQELEAARKYKLQEEERQRKIQQQKVEMEQIR-QQEEARQEQLRVLEEERARELERVRQ 476  Caenorhabditis el...
CAP28691  600 ISRMRELERLQMERQQKNERVRQELEAARKQKILEEERQRKIKEQMREMEKIRkEQEEAREIEMRRLEEERAREMERVRE 679  Caenorhabditis br...
P46504    477 EELERQHQMEILRQQEEDQKKKKLEKDREQREQQEAEELN-RMIIEKEMKENKQKMIEEKNKRKMLEKEMEDRQNAIYEE 555  Caenorhabditis el...
CAP28691  680 EEMERQQQIERLRQQEEERKRKKLEMEKEERKKALIEEERkRKVLEKELEERRQAILEEERKRKILEKEMEERQTAIYEE 759  Caenorhabditis br...
P46504    556 EERRIAEEERRKQIEIEERRRIQQQIMIATEERSRLDAMEREREMLRQIKESEKQRKELErqellATTPITTIKPIYRPD 635  Caenorhabditis el...
CAP28691  760 QQRRKAEEERRKQKEMEERKQIQEQMRKVSEERSRLEAMERERELMRQIIENENKQQEFE-----ATTQITTIKPIYRPN 834  Caenorhabditis br...
P46504    636 ISEYRPPDVESHMIRFTTQSPEWATPSP-TWNPAWNTVTAEEETPGI-PIIHSQCQVNGECELKYDVDSFCAHPRSPSMY 713  Caenorhabditis el...
CAP28691  835 ISEYQPPDVESHMIRFTTQSPEWATPSPaTWNPSWNTVTAEEETPEVsLVMRSQCQINGECELKYDADSFCAHPGTPSMY 914  Caenorhabditis br...
P46504    714 LQCAPLYGRLGRWTERYCPDTLIFIVSIGRCEKGEE 749  Caenorhabditis elegans
CAP28691  915 LQCAPLYGRLGRWTERHCPDTLIFIVSIGRCEKGEE 950  Caenorhabditis briggsae
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