Conserved Protein Domain Family
KCNQ_channel

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pfam03520: KCNQ_channel (this model, PSSM-Id:367540 is obsolete and has been replaced by 460954)
KCNQ voltage-gated potassium channel
This family matches to the C-terminal tail of KCNQ type potassium channels.
Statistics
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PSSM-Id: 367540
Aligned: 14 rows
Threshold Bit Score: 282.384
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9JK97       465 SPSSEQVGEAsSPSKVQKSWSFNDRTR-FRASLRLK---PRCSAE----EGPSEEVAEE-KSYQCELTVDDVMPAVKTVI 535 house mouse
XP_003462849 466 SPSADQSLED-SPSKVPKSWSFGDRSR-ARQAFRIKgaaSRQNSEe--aSLPGEDVVEDnKSCNCEFVTEDLTPGLKVSI 541 Domestic guinea...
XP_013129194 448 PGGADDGAEA-SPSKVTKSSSFTDKNRgAKNAFKARgsiSRKNSEe--aSLPGEEIGDD-KSCHCEFLTQELPPGLKVAI 523 Nile tilapia
Q0P4Q9       368 SPGTEPAAETpSPTKVQKSWSFNDRTR-FRASLRLK---SRPQAD----EGPGDDINDE-KRLPNDLTMEDVMPTIKTLI 438 tropical clawed...
EAW48782     272 SPSTDITAEG-SPTKVQKSWSFNDRTR-FRPSLRLKssqPKPVIDad-tALGTDDVYDE-KGCQCDVSVEDLTPPLKTVI 347 human
XP_028265219 428 SPGPEDGGEG-SPSKVTKSWSFTEKNRgPKQAFKARgstSRQNSEe--aSLPGEEIGDD-KSCHCEFLTQELPPGLKVTI 503 Indian glassy fish
XP_024149438 441 GKGTEDGAEA-SPS---KPWGFPEKNRgQKHAFRVRsgaGRQNSEe--aSLPGEEIGDD-KSCNCEFLAQELPPGLKVTI 513 Indian medaka
XP_014344588 405 SPSTENVNETiSPTKVQKSWSFNDRTR-FRTSLKLK---PRLPIEghaaDGHGEDSNDE-KAYHCDLTVEDIMPAVKTLI 479 coelacanth
XP_016851815 408 SPSTENINEAaSPTKVQKSWSFNDRTR-FRASLRLK---PRIPVEa---DGPVEESSEE-KAYQCDLTFEDIMPAVKTLI 479 green anole
XP_015203979 482 SPSSESVPEAtSPGRVQKSWSFNDRTR-FRTSLRLK---PRPSADv---EAPAEDGAED-KAPHCDVTMEEVIPAVKTLI 553 spotted gar
Q9JK97       536 RSVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQARVDQIVGRGP--GDRKTr-EKGDkg-------- 604 house mouse
XP_003462849 542 RAVCVMRFLVSKRKFKESLRPYDVMDVIEQYSAGHLDMLSRIKSLQSRVDQIVGRGPaiTDKDR--TKGPa--------- 610 Domestic guinea...
XP_013129194 524 RAICIMSFLVSKRRFKESLRPYDVMDVIEQYSAGHLDMLSRIKNLQTRVDQIVGKGP----------KG----------- 582 Nile tilapia
Q0P4Q9       439 RAFRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQGRVDQIIGRGPvpVEKKPr-DKGEkvst-----m 512 tropical clawed...
EAW48782     348 RAIRIMKFHVAKRKFKETLRPYDVKDVIEQYSAGHLDMLCRIKSLQTRVDQILGKGQitSDKKSr-EKIt---------- 416 human
XP_028265219 504 RAICIMKFLVSKRRFKESLRPYDVMDVIEQYSAGHLDMLCRIKNLQSRIDMIVGPPPptTPRHKksTEGPrvdqivgkga 583 Indian glassy fish
XP_024149438 514 RAICVMKFMVSKRRFKESLRPYDVMDVIEQYSAGHLDMLCRIKNLQSRIDMIVGPPPptTPRHKksTEGPrvdqivgkgp 593 Indian medaka
XP_014344588 480 RSVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQIRVDQIIGRGPipNDKKTr-EKGEkv-------- 550 coelacanth
XP_016851815 480 RAVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLCRIKSLQTRVDQIVGRGAiaIDKKVr-EKGEks-------- 550 green anole
XP_015203979 554 RAVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQTRVDQIVGRGAiqPDRKVrsEKGEkt-------- 625 spotted gar
Q9JK97       605 psDTEAVDEISMMGRVVKVEKQVQSIEHKLDLLLGFYSRCLRSG 648 house mouse
XP_003462849 611 --EAELPEDPSMMGRLGKVEKQVLSMEKKLDFLVNIYMQRMGIP 652 Domestic guinea pig
XP_013129194 583 --EGDAVEDQSMMGRLVKVEKQVVCMDRKLDFLVNVYVQRMGIP 624 Nile tilapia
Q0P4Q9       513 gpEVEAADELSMMGRVVKVERQVQSIEDKLDILLGFYSQCIRKG 556 tropical clawed frog
EAW48782     417 -aEHETTDDLSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKG 459 human
XP_028265219 584 kpDGEAQDDQSMMGRLVKVEKQVVCMDRKLDFLVHAYVQQMGIp 627 Indian glassy fish
XP_024149438 594 kvDGEAPDDQSMMGRLVKVEKQVVCMDRKLDFLVNVYTQRMGIp 637 Indian medaka
XP_014344588 551 ppELDQMDELSMMGRVVKVEKQVQSIEQKLDLLLDVYSQCLRKG 594 coelacanth
XP_016851815 551 slEMELVDELSMLGRVVKVEKQVQSIEHKLDLLLGVYSQCLRKG 594 green anole
XP_015203979 626 ppELDPLDELSMMGRVVKVEKQVQSIEHKLDLLLNFYTQCLKKG 669 spotted gar
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