5ECJ,6MZC


Conserved Protein Domain Family
TAFH
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pfam07531: TAFH (this model, PSSM-Id:369407 is obsolete and has been replaced by 462195)
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NHR1 homology to TAF
This corresponds to the region NHR1 that is conserved between the product of the nervy gene in Drosophila and the human mtg8b protein, which is hypothesized to be a transcription factor.
Links
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Statistics
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PSSM-Id: 369407
Aligned: 35 rows
Threshold Bit Score: 93.4413
Created: 4-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5ECJ_A        209 QLSKLKRFLTTLQQFGNDI-SPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCA 287 house mouse
XP_003242961  122 NHSKLKRFLTTLVQFSGQI-SPQTSERVKGQIFTLVNNLISVEEFHHHIQEMTNFPLRPFVLPFLRTHLPSLQRDLLLMA 200 pea aphid
EEB16010       91 NLGKLKRFLSTLVQFGAEI-NSELGDKVRNLVFSMVNGNLTIEEFHTNLQDATNFPLRPFVLPFLKTHLPLLQKELAFQA 169 human body louse
17_pfamImport   1 --QKMKRLLCTLVNHVREI-NPETGEKVAKLVLALVAGNMTLDDFQKSLQEAANCPLRPFVVPFLLAYLPVLQKEVAHLA 77 
EDW49168      269 LVSKMRKFLGALVQFSQELgQPEVSERVRALVLSLCSGSISVEEFRLALQEAINLPLRPYVVPLLKNSIALVQREILALA 348 Drosophila sec...
Q17EZ2         81 KLLKIRRFLGALVQFGQDT-NVDIGDRVRSLVLSLASGGLTVEEFQIAVQEATNFPLRSNVVPFLKSHVPVLQREITILS 159 yellow fever m...
XP_006008532    1 ---------------------------------MHQNSTLTIEDFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLYCA 47  coelacanth
XP_010716551   51 QLSKLKRFLTTLQQFGNDI-SPEIGERVRTLVLGLVNSTLTIEEFHAKLQEATNFPLRPFVIPFLKANLPLLQRELLHCA 129 turkey
DAA22536      122 QLSKLKRFLTTLQQFGNDI-SPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKVLLSSLVWKVFSNR 200 cattle
XP_023362567   86 QLSKLKRFLTTLQQFGNDI-SPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCA 164 Tasmanian devil

5ECJ_A        288 RAAKQTPSQYL 298 house mouse
XP_003242961  201 RNNKQTLSQYL 211 pea aphid
EEB16010      170 RIAKQSTSQYL 180 human body louse
17_pfamImport  78 RSSKQGVLEYL 88 
EDW49168      349 RATNQSALQYV 359 Drosophila sechellia
Q17EZ2        160 RASKQTPTQYV 170 yellow fever mosquito
XP_006008532   48 RLAKQTPAQYL 58  coelacanth
XP_010716551  130 RMAKQSPAQYL 140 turkey
DAA22536      201 TVARSQQCFFL 211 cattle
XP_023362567  165 RAAKQTPSQYL 175 Tasmanian devil
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