1UBX,5ZE6


Conserved Protein Domain Family
polyprenyl_synt

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pfam00348: polyprenyl_synt (this model, PSSM-Id:376322 is obsolete and has been replaced by 459773)
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Polyprenyl synthetase
Statistics
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PSSM-Id: 376322
Aligned: 483 rows
Threshold Bit Score: 148.394
Created: 19-Jun-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UBX_A             56 VARLKEVLQYNA-PGGKCNRGLTVVAAYRELSgPgqkdAe-SLR----C---ALAVGWCIELFQAASLVADDIMDQSLTR 126 chicken
Q46LT1             30 HPILQAAAEHLFsAGGKRLRPGIVLLISRALT-S----E----KelplK---HRKLAQITEMIHTASLVHDDVVDEADTR 97  Prochloroc...
Q7V268             30 HPILQAAAEHLFsAGGKRLRPGIVLLISKAIS------Q--DFT----LttkHKRLAEITEMIHTASLVHDDVVDEASTR 97  Prochloroc...
Q7VBQ0             30 HPILQAAAEHLFsAGGKRIRPGIVLLISKALS-A----Eg-ELS----Sk--HRRLAEITEMIHTASLVHDDVLDEASTR 97  Prochloroc...
Q7V8F9             30 HPILQAAAEHLFsAGGKRLRPGIVLLISRALS-A----Dg-DLS----Ar--HRRLAEITEMIHTASLVHDDVVDEAATR 97  Prochloroc...
Q7U7H3             30 HPILQAAAEHLFsAGGKRLRPGIVLLLSRALS-A----DgqLTP----R---HRRLAEITEMIHTASLVHDDVVDEASTR 97  Synechococ...
Q8DI35             30 HAVLSAAAEHLFaASGKRIRPAIVFLVSRATL-P----DqgITP----R---HCRLAEITEMIHTASLFHDDVVDQAQLR 97  Synechococ...
tgen:AM1_4909      30 HPVLFAAAEHLFqAGGKRMRPAIVLLLSRALLpD----Qd-LTP----R---HRRLAEITEMIHTASLLHDDVVDDSGVR 97  Acaryochlo...
jgi:Cyan7425_4840  30 HPVLYAAAEHLFgAEGKRIRPAIVLLLARAISpS----Qe-ISS----R---HRRLAEITEMIHTASLFHDDVVDQSDLR 97  Cyanothece...
XP_010644049      125 NPVLMSAAEQIFgAGGKRMRPALVFLVSRATA------EiaGLKdltiK---HRRLAEIIEMIHTASLIHDDVLDESDMR 195 wine grape
1UBX_A            127 RGQLCWYKKEGVGLdAINDSFLLESSVYRVLKKYcrQrpyYVHLLELFLQTAYQTELGQMLD-LITApvSKVDLShfsEE 205 chicken
Q46LT1             98 RGVETVHSRFDPRI-AVLAGDFLFAQASWHLANL--E---NLEVVKLLSRVIMDLAEGEIKQgL-NR--FDSSQS---FE 165 Prochloroc...
Q7V268             98 RGVDTVHSRFNTRV-AVLAGDFLFAQASWHLANL--D---NVKVVKLLSRVIMDLAEGEIKQ-NLNR--FDSAQT---FS 165 Prochloroc...
Q7VBQ0             98 RGVDTVHNRFDHKV-AVLAGDFLFAQASWHLANL--D---NLDVVKLLSRVIMDLAEGEVKQ-GIYR--FDPNQS---LD 165 Prochloroc...
Q7V8F9             98 RGVATVHSRFNHRV-AVLAGDFLFAQASWHLANL--D---NLAVVKLLSRVIMDLADGEVKQ-GLYR--YDTGQS---FA 165 Prochloroc...
Q7U7H3             98 RGVDTVHSRFDARV-AVLAGDFLFAQASWHLANL--D---DLEVVKLLSRVIMDLADGEVKQ-GLFR--FDTAQS---FE 165 Synechococ...
Q8DI35             98 RGVPTVNSVFGNRV-AIQAGDFLFAQASWYLADL--D---NLQVVKLLSQVIKDFAEGEIRQ-GFNR--FDTSIT---LD 165 Synechococ...
tgen:AM1_4909      98 RGVPSVHSLFGNRI-AIQAGDFLFAQASWYLANL--D---NLEVVKLLSEVIKDFAEGEIQQ-GINC--FDTSLT---LE 165 Acaryochlo...
jgi:Cyan7425_4840  98 RGLPTVHSLFGNRI-AIQAGDFLFAQASWYLADL--D---NLTVVKLLSQVIKDFAEGEIQQ-GFNR--FDTSLT---MA 165 Cyanothece...
XP_010644049      196 RGKETVHQLYGTRV-AVLAGDFMFAQSSWYLANL--E---NLEVIKLISQVIKDFASGEIKQ-ASSL--FDCELE---LE 263 wine grape
1UBX_A            206 RYKAIVKYKTAfYSFYLPVAAAMYMVGIdSkEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGK-VGTDIQDNKCSWL 284 chicken
Q46LT1            166 SYLEKSYCKTA-SLIANSSKAIGVLSNVdQ-ESLNSLYFFGRQLGLAFQVVDDILDFTGNDEQLGKpAASDLQSGYLTAP 243 Prochloroc...
Q7V268            166 KYINKSYCKTA-SLIANSTKAAGVLCNLeD-DKLNHLYEFGKNIGLAFQVVDDILDFTGNDKQLGKpAVSDLASGYLTAP 243 Prochloroc...
Q7VBQ0            166 VYLEKSYCKTA-SLIANSAQAVGVLSNEsD-YHLKCLYNFGKQLGLAFQVVDDILDFTSDDKQLGKpAASDLSAGYLTAP 243 Prochloroc...
Q7V8F9            166 TYLEKSYCKTA-SLMANSVQAAGVLSGEsV-EHQKLLHHFGRQLGLAFQVVDDILDFTGSEQQLGKpAASDLASGYLTAP 243 Prochloroc...
Q7U7H3            166 TYLEKSYCKTA-SLIANSARAAGVLSDCsP-SELDGLYRFGRQLGLAFQVVDDILDFTGSDQQLGKpAASDLASGYLTAP 243 Synechococ...
Q8DI35            166 DYLLKTYYKTA-SLIANSAKAAAVLSEApP-ETIEAMYTYGKNLGLAFQIVDDILDFTRSTAELGKpAGSDLRDGNLTAP 243 Synechococ...
tgen:AM1_4909     166 AYLEKSYYKTA-SLMANSAKAAGVLSGTsL-QVNQDLYAYGRCVGLAFQIVDDILDFTGSTNALGKpACSDLRSGNLTAP 243 Acaryochlo...
jgi:Cyan7425_4840 166 AYLDKTYYKTA-SLIANSSKAVGVLSGIsA-QSSQSLYEYGRHVGLAFQIVDDILDFTRSTDDLGKpAGSDLKDGTLTAP 243 Cyanothece...
XP_010644049      264 EYLLKSFYKTA-SLIAASTKGAAIFSGVdS-NIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKpAGSDLAKGNLTAP 341 wine grape
1UBX_A            285 VVQCLQrvtPEQrqLLEDNYGRKePekVAKVKELYEAV 322 chicken
Q46LT1            244 VFYALEe-nPS----LSELINGK-FsqKDDLDQALSLV 275 Prochlorococcus marinus str. NATL2A
Q7V268            244 VLYALE----ENe-NLSVLINRE-LveKEDLNNALNIV 275 Prochlorococcus marinus subsp. pastoris str. CCMP1986
Q7VBQ0            244 ALYALEe-nPS----FKELIIRE-FsnEGDLDHAMELV 275 Prochlorococcus marinus
Q7V8F9            244 ALYALE----EHl-ALARLIERE-FseEDDLDQALELV 275 Prochlorococcus marinus str. MIT 9313
Q7U7H3            244 TFYAMEe-qPG----LQALIARE-FaePGDLDQALEMV 275 Synechococcus sp. WH 8102
Q8DI35            244 VLFALPk-aPY----LHTLIERE-FseEGDLETALNLV 275 Synechococcus elongatus
tgen:AM1_4909     244 VLFAIA-----EkpYLKVLIDRH-LeeEEDLDEAIALV 275 Acaryochloris marina MBIC11017
jgi:Cyan7425_4840 244 ALYALEe-qPY----LKVLIERE-FreTGDLEAAIALV 275 Cyanothece sp. PCC 7425
XP_010644049      342 VIFALE---KEPk--LREIVESE-FceAGSLNEAIKLV 373 wine grape
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