4ZK0,2ZV6,4ZK3


Conserved Protein Domain Family
serpinB3_B4_SCCA1_2

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cd19563: serpinB3_B4_SCCA1_2 
Click on image for an interactive view with Cn3D
serpin family B members 3 and 4, squamous cell carcinoma antigens 1 and 2
Squamous cell carcinoma antigen 1 (SCCA1, also called HsT1196 or protein T4-A) and squamous cell carcinoma antigen 2 (SCCA2, also called PI11 or leupin), which are encoded by the SERPINB3 and SERPINB4 genes, respectively, are members of the serpin family of serine protease inhibitors. SCCA1 is a so called cross-class serpin, inhibiting cysteine proteinases such as cathepsin S, K, L, and papain. SCCA2 inhibits chymotrypsin-like serine proteases including chymase, cathepsin G, and Der p1. Elevated levels of SCCA1 and SCCA2 have been detected in chronic inflammatory conditions involving the skin, especially atopic dermatitis (AD)and psoriasis, as well as in respiratory inflammatory diseases such as asthma, chronic obstructive pulmonary disease (COPD), and tuberculosis. They are both normally co-expressed in squamous epithelial cells of tongue, esophagus, tonsils, epidermal hair follicles, lung and uterus, and become highly up-regulated in squamous carcinomas of these organs. Diseases associated with SERPINB3 include anal cancer and cervical squamous cell carcinoma, whereas SERPINB4 include squamous cell carcinoma and chromosome 18Q deletion syndrome. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381030
Aligned: 6 rows
Threshold Bit Score: 719.511
Created: 28-Aug-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
reactive center
Conserved site includes 31 residues -Click on image for an interactive view with Cn3D
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, RCL is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form
  • Structure:4ZK3_A: Human Pso p27, generated by cleavage of serpinB3, RCL, inserted
    View structure with Cn3D
  • Structure:2ZV6_A: Human SCCA1 (serpinB3) RCL, flexible and solvent exposed
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
4ZK0_A         1 MNSLSEANTKFMFDLFQQFRKSkENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVDrsgN 80  human
2ZV6_A        12 SNSLSEANTKFMFDLFQQFRKSkENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVDrsgN 91  human
4ZK3_A         1 MNSLSEANTKFMFDLFQQFRKSkENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVDrsgN 80  human
AAO92272       1 MNSLSEANTKFMFDLFQQFRKSkENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVDrsgN 80  Homo sapiens
P48594         1 MNSLSEANTKFMFDLFQQFRKSkENNIFYSPISITSALGMVLLGAKDNTAQQISKVLHFDQVTENTTEKAATYHVDrsgN 80  human
XP_017177030   1 MDLFAVATTKFTLELYRQLRES-DNNIFYSPISMMRTLAMLLLGAKANTEQQIKKVLHFNETTKKTTEKSAESHVK---N 76  Mus musculus
Feature 1                                                                                        
4ZK0_A        81 VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIK 160 human
2ZV6_A        92 VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIK 171 human
4ZK3_A        81 VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIK 160 human
AAO92272      81 VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIK 160 Homo sapiens
P48594        81 VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYQFLQEYLDAIKKFYQTSVESTDFANAPEESRKKINSWVESQTNEKIK 160 human
XP_017177030  77 VHQQFQMLMTQLNKFNNAYDLKVPNSIYGAKDFPFLQTFLKDIRKYYQANVESLDFAHAAEESQKKINSWMARQTNGKIK 156 Mus musculus
Feature 1                                                                                        
4ZK0_A       161 NLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKD 240 human
2ZV6_A       172 NLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKD 251 human
4ZK3_A       161 NLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKD 240 human
AAO92272     161 NLIPEGNIGSNTTLVLVNAIYFKGRWEKKFNKEDTKEEKFWSNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKD 240 Homo sapiens
P48594       161 NLFPDGTIGNDTTLVLVNAIYFKGQWENKFKKENTKEEKFWPNKNTYKSVQMMRQYNSFNFALLEDVQAKVLEIPYKGKD 240 human
XP_017177030 157 DLFPSGSLNSSTILVLVNAVYFKGQWNHKFDEKHTREEKFWLNKNTSKPVQMMKQRNKFNFIFLENVQAKIVEIPYKGKE 236 Mus musculus
Feature 1                                                                                        
4ZK0_A       241 LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGD-ADLSGMTG 319 human
2ZV6_A       252 LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGD-ADLSGMTG 330 human
4ZK3_A       241 LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGD-ADLSGMTG 319 human
AAO92272     241 LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGD-ADLSGMTG 319 Homo sapiens
P48594       241 LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETCVDLHLPRFKMEESYDLKDTLRTMGMVNIFNGD-ADLSGMTW 319 human
XP_017177030 237 LSMFVLLPVEIDGLKKFEEQLTADKLLQWTRAENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQkADFSGMSN 316 Mus musculus
Feature 1                         ##################### ##########                      
4ZK0_A       320 SRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTsTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 390 human
2ZV6_A       331 SRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTsTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 401 human
4ZK3_A       320 SRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTsTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 390 human
AAO92272     320 SRGLVLSGVLHKAFVEVTEEGAEAAAATAEVGFGSSPTsTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 390 Homo sapiens
P48594       320 SHGLSVSKVLHKAFVEVTEEGVEAAAATAVVVVELSSPsTNEEFCCNHPFLFFIRQNKTNSILFYGRFSSP 390 human
XP_017177030 317 SQGLVVSKVLHKSFVEVNEEGAEAATAMSVESRSLSVP-KPNDFSCNHPFLFVMKQNKTNSILFFGRVSSP 386 Mus musculus

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