3M0C,3M0C,3M0C,3M0C


Conserved Protein Domain Family
Ldl_recept_b

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pfam00058: Ldl_recept_b (this model, PSSM-Id:395012 is obsolete and has been replaced by 459654)
Low-density lipoprotein receptor repeat class B
This domain is also known as the YWTD motif after the most conserved region of the repeat. The YWTD repeat is found in multiple tandem repeats and has been predicted to form a beta-propeller structure.
Statistics
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PSSM-Id: 395012
Aligned: 23 rows
Threshold Bit Score: 45.2374
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3M0C_C  526 GFMYWTDWGTPa----KIKKGGLNG-VD--IYSLVTEN---IQWPNGITLD 566 
P35950  616 DKVFWTDVINEa----IFSANRLTG-SD---VNLVAEN---LLSPEDIVLF 655  Chinese hamster
P35953  568 GFVYWSDWGEPa----KIEKAGMNG-FD--RRPLVTVD---IQWPNGITLD 608  rabbit
P35950  529 GFMYWTDWGTPa----KIKKGGLNG-VD--IYSLVTED---IQWPNGITLD 569  Chinese hamster
Q04833 3445 GYLFFTEWSLQp----YIGRIALDG-SPelQDPIFKLAehdLGWPNAIAID 3490 Caenorhabditis elegans
P98158 1884 GKLYWSDHGTDsgvpaKIASANMDG-TS--LKILFTGN---LQHLEVVTLD 1928 Norway rat
P35950  440 NRIYWSDLSQGki--ySALMDQAPT-LS--YDTIISGD---LQAPDGLAVD 482  Chinese hamster
P01130  439 NRIYWSDLSQRmi--cSTQLDRAHG-VSs-YDTVISRD---IQAPDGLAVD 482  human
3M0C_C  436 NRIYWSDLSQRmi--cSTQLDRAHGvSS--YDTVISRD---IQAPDGLAVD 479 
3M0C_C  613 DKVFWTDIINEa----IFSANRLTG-SD--V-NLLAEN---LLSPEDMVLF 652 
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