4YJ0


Conserved Protein Domain Family
DM
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pfam00751: DM (this model, PSSM-Id:395608 is obsolete and has been replaced by 459924)
DM DNA binding domain
The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA.
Links
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Statistics
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PSSM-Id: 395608
Aligned: 57 rows
Threshold Bit Score: 63.4537
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4YJ0_A     6 RLPKCARCRNHGYAS-PLKGHKR-FCMWRDCQCKKCNLIAERQRVMAAQ 52 
CAP22218  91 RDPHCARCSAHGVLV-PLRGHKRtMCQFVTCTCTLCALVENRRMLMAAQ 138 Caenorhabditis briggsae
Q95XU1    27 KKLTCRKCEGHGTYA-ILKGHAG-VCPYKDCSCGTCASVMS----MRAN 69  Caenorhabditis elegans
EDO34491  12 KPPTCTRCRNHFVWFvPLKGHSK-VCPWKTCECDKCILIKQRGETNRKR 59  starlet sea anemone
Q18435    39 KIYYCQRCLNHDVPR-PRKNHKC-ECPYADCTCEKCGLVEKRRILNIRL 85  Caenorhabditis elegans
Q9XWN9    15 RVYYCQRCLNHGLRE-KRKNHKL-SCTFRFCQCSNCIMVERRRQLNSRL 61  Caenorhabditis elegans
EDO47713  18 KSKTCRKCRSHGKIT-PLEGHKR-NCPYIKCDCLSCTRL-DRQNLASKK 63  starlet sea anemone
CDS40579  75 SSYMCRKCRAHGRLI-AVRQHKR-NCPYKHCSCSVCSLVNYGRHIVARQ 121 Echinococcus multilocularis
EGT54512  90 RDPHCARCSAHGVMV-PLKGHKKtNCQFTNCRCKLCVLVENRRHLMAAQ 137 Caenorhabditis brenneri
PIC43178  25 KNYYCQRCLNHGELK-PRKGHKP-DCRYLQCPCPECKMVEQRRQLNNLL 71  Caenorhabditis nigoni
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