4FQN


Conserved Protein Domain Family
CCM2_C

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pfam16545: CCM2_C (this model, PSSM-Id:406849 is obsolete and has been replaced by 435415)
Cerebral cavernous malformation protein, harmonin-homology
CCM2_HHD is a folded-helical region of a family of vertebral proteins, mutations in which cause cerebral cavernous malformations (CCMs). These malformations are congenital vascular anomalies of the central nervous system that can result in haemorrhagic stroke, seizures, recurrent headaches, and focal neurologic deficits. This domain is structurally homologous to the N-terminal domain of harmonin, so it is named the CCM2 harmonin-homology domain or CCM2_HHD. This protein is often called Malcavernin.
Statistics
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PSSM-Id: 406849
Aligned: 9 rows
Threshold Bit Score: 147.927
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4FQN_A         6 SESELSASATELLQDYMLTLRTKLSSQEIQQFAALLHEY-----RNGASIHEFCINLRQLYGDSRKFLLLGLRPFIPEKD 80 
EGW00286     163 SSIDHSSWAFEQLQDYMVTLRSKLGPPEIQQFAMLLRDY-----RLGLPIQDYCAGLQKLYGDRRKFLLIGMRPFIPDQD 237 Chinese hamster
XP_012425678 120 SGSDQSGAGLEQLQDYMVTLRNKLSPQEIQQFAILLREY-----RLGTPVQEYCTELLHLYGDRRKFLLLGMRPFIPDQD 194 zebra finch
XP_012810623 295 SGAEEGNVALEQLQEYLATLRNKLTPMEIQRFAALLRQY-----RLGMEVAEYCTELLHLYGESRKFLLLGLRPFIPDLD 369 tropical clawed...
XP_002588669 293 SDISITPSAQELLQDYMSLLKTRLKTEELKQFALLLRQY-----RTSISVREFCIRLKDLYREERKFLMAGMRPFIPEKD 367 Florida lancelet
XP_014325310 449 SDGADSNPALLLMQEYMITLRNKLNPLELQQFAVLLREY-----RLGSNIDHFCSELLQLYGDKRKFLLLGMRPFIPDKD 523 southern platyfish
XP_006639681 452 SESEQSSVEVQLLQEYMITLRSKLSPPEIQQFALLLREY-----RMGAHIEEFCSDLLQLYGDKRKFLLLGMRPFIPDKD 526 spotted gar
XP_006008753 433 SGSDHGNAVVEMLQEYMVTLRNKLSPLEIQEFALLLRKY-----RMGSSVEKYCSELLHLYGEKRKFLLLGMRPFIPDTD 507 coelacanth
EKC24547     224 SDASNQSIQAELLRSYLEQLRSKFTVDELAKFSTLLKQIndpspRSHKDLLAVFQEVFQLYGNERKNLLAGLCPFIYEKH 303 Pacific oyster
4FQN_A        81 SQHFENFLETIGVKDG 96 
EGW00286     238 IGYFESFLESVGIREG 253 Chinese hamster
XP_012425678 195 IGYFETFLESIGIREG 210 zebra finch
XP_012810623 370 IGYFESFLENIGIREG 385 tropical clawed frog
XP_002588669 368 SQYFESFLESIGV-DG 382 Florida lancelet
XP_014325310 524 VGVFEEFLESIGIREG 539 southern platyfish
XP_006639681 527 VGVFESFLESIGIREG 542 spotted gar
XP_006008753 508 IGYFEQFLENIGIREG 523 coelacanth
EKC24547     304 YANFLDFLKKQGIAID 319 Pacific oyster
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