2M2B


Conserved Protein Domain Family
RRM2_RBM10

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cd12754: RRM2_RBM10 
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RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
This subgroup corresponds to the RRM2 of RBM10, also termed G patch domain-containing protein 9, or RNA-binding protein S1-1 (S1-1), a paralog of putative tumor suppressor RNA-binding protein 5 (RBM5 or LUCA15 or H37). It may play an important role in mRNA generation, processing and degradation in several cell types. The rat homolog of human RBM10 is protein S1-1, a hypothetical RNA binding protein with poly(G) and poly(U) binding capabilities. RBM10 is structurally related to RBM5 and RNA-binding protein 6 (RBM6 or NY-LU-12 or g16 or DEF-3). It contains two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), two C2H2-type zinc fingers, and a G-patch/D111 domain.
Statistics
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PSSM-Id: 410148
Aligned: 5 rows
Threshold Bit Score: 140.913
Created: 17-Jan-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2M2B_A        22 ANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLST------------------------- 76   human
XP_003216755 285 ANDTIILRNLNPHSTMDSILSALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTi------------------------ 340  green anole
CAG07342     398 ANDTLILRNLGPHTSLDSILSALAPFATLSPSNVRLIKDKHTHLNRGFAFLQLSTivvssmrqtclrlvlpcankllrsr 477  spotted green ...
P98175       298 ANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTi------------------------ 353  human
XP_006004033 146 ANDTIILRNLSPHTSLETILTTLAPYAALSASNVRLIKDKQTQLNRGFAFVQLSTi------------------------ 201  coelacanth
2M2B_A        77 -------------------IEAAQLLQILqaLHPPLTIDGKTINVEFAKG 107  human
XP_003216755 341 -------------------VEAAQLLQILqaLHPPLSIDGKTINVEFAKG 371  green anole
CAG07342     478 leagsklqtlapvithrspQEASQLLQILqaLQPSLSIDGKTIMVEFAKG 527  spotted green pufferfish
P98175       354 -------------------VEAAQLLQILqaLHPPLTIDGKTINVEFAKG 384  human
XP_006004033 202 -------------------VEASHLLQILqtLMPPLTIDGKSISVEFAKG 232  coelacanth
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