1M12,1NKL


Conserved Protein Domain Family
SapB_1

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pfam05184: SapB_1 
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Saposin-like type B, region 1
Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. It is one of the most studied members of the saposin protein family and it is involved in the hydrolysis of glycolipids and glycerolipids. SapB is unique in the saposin family in that it facilitates degradation by interacting with the substrate, not the enzymes.
Statistics
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PSSM-Id: 461575
Aligned: 417 rows
Threshold Bit Score: 26.0266
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1M12_A          3 VYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLP 40   human
Q54SX7        109 VECTICDFALKEVEGFLQNSETETEILTQVDKACDLFG 146  Dictyostelium discoideum AX4
EFA80299       31 VTCEACELVVSYVERFLEQNKTINEIEQELEKVCLYLP 68  
XP_002606173  297 LSCETCQLSLSYVDKMLQYNATKKEITTALNEVCSYVP 334 
XP_001623555  128 DECITCQEAVNTVYKFVSNPAIEDEIVALLSKVCSEFG 165  starlet sea anemone
XP_015791584  957 PECILCKRVFEYIYSYLQENRTEDAIADALDKVCDDIF 994 
XP_002613680  266 VGCIICEFVMQIVDEELSANSTEKEITDALDKVCSHFP 303  Florida lancelet
XP_001623555  336 ETCEICTTVMTYLKAFLNNNATDEEIVNFLEKVCNYLP 373  starlet sea anemone
XP_026692825  945 VTCELCTAVMTQVDKLLSENATQTEIVAALDKVCMIIP 982 
XP_007505701   62 FPCEACKKVVSVVENFLKENGSETEIENYLEKECEMLP 99  
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