Conserved Protein Domain Family
CLN6

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pfam15156: CLN6 
Ceroid-lipofuscinosis neuronal protein 6
This family of proteins is found in eukaryotes. Proteins in this family are typically between 190 and 310 amino acids in length.
Statistics
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PSSM-Id: 464536
Aligned: 7 rows
Threshold Bit Score: 504.684
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005997131  24 GAADGDAPVKKSHFHLDLWFYFTVQNWVLDFGRPVAMIILPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIERSPKTLP 103
NP_001178723  27 GSAKAEDKDRTAPFHFDLWFYFTLQNWVLDFGRPIAMLVFPIQWFPLNKPSVGDYFHMAYNIITPFLLLKLMERSPRTLP 106
NP_001120230  20 SSAQPDDGSRTSRFHLDLWFYFTVQNWLLDFGRPIVMIILPLDWFPLNKPSAGDYFHMAYNIITPLLLLKLIERSPKTLP 99 
XP_023187708  18 VCKENAPKRKRQPFHFDLWLCLTLQNWILDFGRPIVMIALPLELFPLNKPSVGDYFHMIYNVVAPFLLLKLIERAPRPVP 97 
XP_007231253  28 ASKDTDTPVKKPQFHLDLWCFFTIQNWVLDFGRSIIMILFPLQWFPLNKLIVGDYFHIAYNVITPFLLLKLIDRSPKTLP 107
XP_017209599  23 LRELRESCLTPDQFHSCFWCCFTLQNWLLDIGRPVITIFCPLDWFPLNKPSAADYCHMLYNITTPFLLLKLMERSPKTLP 102
XP_029310941  22 GLKENVPQQKRQHFHLDLWFCLTLQNWILDFGRPIVMIILPLEWFPLNKPSAGDYFHMAYNVITPFLMLKLIERSPRALP 101 Cottoperca gobio
XP_005997131 104 RAAVYICIITFVMGASIHLVGDSVNHRLILSGYQLHLSVRENPIIKNLKPEALIDSFELLYYYDENLGHSMWYIPFYLIF 183
NP_001178723 107 RSIIYVSIITFIMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPETLIDSFELLYYYDEYLGHCMWYIPFFLIL 186
NP_001120230 100 NSVIYVSIITFVMGASIHLVGDSVNHRLIFSGYQLHLSVRDNPIMQNLTPPTLVDSFELLYYYDEYLGHSMWYIPFFLIL 179
XP_023187708  98 HTAVHLCIITFVMGASIHLVGDSINHRLILSGYQLHLSVRENPIIKDLKPASLIDSFELLYYYDEHLGHLMWYIPFFIIV 177
XP_007231253 108 VSAVYLCIIAFVMGASINLVGDSMNHRLLLSGYQLHLSVRENPIMKNLNPPSLVDSFELLYYYDEHVGRCLWYIPFFLIL 187
XP_017209599 103 RSAMYLCIITFVMGSSIHLLGESINQRLLISGYQTHLTLRENPIIKSISPHTLIDSFELLQYYDESLGLCMWYVPLFLIL 182
XP_029310941 102 RSAVYLCIITFVMGASIHLVGDSINHRLILSGYQLHLSVRENPIIKDLKPASLIDSFELLYYYDEQLGHLMWYIPFFIIL 181 Cottoperca gobio
XP_005997131 184 FLYFTGCFTPIKEDNKMPLSAWLLLGPSGLYYWYLVTEGQIFILYIFTFFAMMAIVMHQKRKGLVLDSNGLFLFYSFSIT 263
NP_001178723 187 FMYFSGCFTTSKAESHMPGPALLLVVPSGIYYWYLVTEGQIFILFIFTFFAMLALVLHQKRRRLLLDSNGLFLFCSFALT 266
NP_001120230 180 FIYFTGCFTKIRAESRMPLSAWALLAPSSLYYWYLVTEGQIFIIFIFTFFAMLAIIMHQRRKGLHLDSNGLFLLFSFSAT 259
XP_023187708 178 LIYFSACFSDSDGQEKMPLSGWLLLGASSLYYWYLATEGQITGLFLLTFLAMFTVMIFQKRKGLAPDSNGSFLFYSFSIT 257
XP_007231253 188 FLYFSGCFTVLKVEKRMPQSAWLLLAPSSLYYWYLVTERQIFILFIFTFFAMTATVMHQKRKGLVPDCNGLFLLYSFSIV 267
XP_017209599 183 FLYFTGCFTIVKAEKKMPVSAWILLGPSGLYYWYLVTEGQIFIPFIFTFFAMMATVLHQKRKGFLPDSNGLFLLYSFSIS 262
XP_029310941 182 FIYFTGCFTKAKEQKKIPVSGWLLQGPSALYYWYLVTEGQITELFLLTYFAMVVMVIHKQRKGLSPDSNGLFLFCSFSVT 261 Cottoperca gobio
XP_005997131 264 LALIAVWVVWLWNDKILRKKYPGVMYVPEPWAFYSLHIKS 303
NP_001178723 267 LLLVALWVAWLWNDPVLRKKYPGVIYVPEPWAFYTLHVSN 306
NP_001120230 260 LIFIAAWIVWLWNDQILRKKYPGVIYIPEPWAFYTLHVNN 299
XP_023187708 258 LLLVSLWVAYLWDDPVLRNKYPGLFYVPEPWSYYTLHIRK 297
XP_007231253 268 LILLTVWVSCLWNDKILRKKYPGVIYIPEPWAVYTLHIRD 307
XP_017209599 263 LFLVSVWVACLWNDKVLRKKYPGVMYIPEPWALYTLHLRD 302
XP_029310941 262 VLLVALWVIYLWNDPVLRNKYPGLIYVPEPWSYYTLHVKE 301 Cottoperca gobio
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