1W3G,1W3F,1W3A,2Y9F,2Y9G,4I4O,4I4Q,4I4S,4I4X


Conserved Protein Domain Family
beta-trefoil_Ricin_BEL-like

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cd23424: beta-trefoil_Ricin_BEL-like 
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ricin B-type lectin domain, beta-trefoil fold, found in Boletus edulis lectin (BEL), Laetiporus sulphureus lectin (LSL) and similar proteins
BEL has potent anti-proliferative effects on human cancer cells. It functions as a homodimer and each protomer folds as a beta-trefoil. The BEL beta-trefoil binds galactose and other galactose-containing carbohydrates. LSL is a lectin that exhibits hemolytic and hemagglutinating activities. It functions as a hexamer. Its monomeric protein consists of two distinct modules: an N-terminal beta-trefoil lectin module (LSL150) and a C-terminal membrane pore-forming module (PFM). All members of this subfamily contain a ricin B-type lectin domain with a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (called alpha, beta, and gamma, respectively) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may contain a potential sugar-binding site. Due to the lack of an aromatic residue, the sugar binding within alpha-site of LSL150 might be absent.
Statistics
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PSSM-Id: 467302
Aligned: 21 rows
Threshold Bit Score: 128.628
Created: 27-Apr-2023
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:sugar binding site [chemical binding site]
Evidence:
  • Comment:sugar binding pocket within beta subdomain
  • Structure:1W3G; Laetiporus Sulphureus lectin in complex with two N-acetyllactosamine molecules, contacts at 4A
    View structure with Cn3D
  • Structure:4I4S; Boletus edulis lectin in complex with lactose, contacts at 4A
    View structure with Cn3D
  • Structure:2Y9G; Laetiporus sulphureus lectin in complex with lactose, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   # 
1W3G_A      6 IPPEGLYFRLLGfa-sRQVIFARNsp-sPDVGLSPVNDqa-----tDQYFSLIYGTGeh-agLYAIKSKa---tGKVLFS 74  Laetiporus sulphureus
KIJ34088    7 IPPPGVTFRLLGyv-sQEVIFAKPhtgsQGTGIAPLDEkd-----tSQVFTLTAGTDnh-agLYQIKSIn---nSLVLYA 76  Sphaerobolus stell...
KUI56236    7 IPPKDMPVRLVGfh-sQCALYQLGed-eVDVGHAPAFEqsasadhdVMFWYIVPATGky-qgYYLIKSKw---sGRVLFS 80  Valsa mali var. pyri
KUI65119    9 TPPPGLRFRLIAyy-sNKAIFGKN----GVVSHFDASKvy-----dDMWWTLVPHSEpamrsWYHIRSEykyndEKCITI 78  Valsa mali
CEL11276   11 IPQPGSKFRLAGlq-sSKVLVAKSd---DRLVDYPQGQiy-----aDQWFYLEPAPTp---gTYYIRSSa---sQKVIYS 75  Aspergillus calido...
OJJ36420   11 IPYPARSIRIVGfq-sNCVLLSRDha-sPYFDQWPSYYvh-----nDQYWYIIPGKGkf-egYYYIKSWm---tGRVLFS 79  Aspergillus wentii...
OQE08375    9 IPTKGLRFRLLGyysdNIPVPSGKqi-sCRSKDSVSSE--------DGWFTLVPIDGg---kFYYIQSAlkhddEAAISS 76  Penicillium vulpinum
RVD88913   11 IPPATIRVRLVGvl-sRAALFSNPry-dGVLKQVPMAEly-----dDQWFYVIPGTGdk-asFYRLKSAy---tNEAVYL 79  Arthrobotrys flagrans
VDB94525    7 NPPEGLPFRLFGya-rQHVLALRTqy-nAEATHSPSEEvq-----pDQLVTVVHDKDsr-rgKYAIKSKd---sSKFIQC 75  Peniophora sp. CBM...
PKB97961    5 IPPKGLKFRLQNyk-sKWAIFSRFsq-ePKFFHFTSSDey-----kDQYWTLIPGTGkh-sgYFRIENCv---tQQAIFS 73  Rhizophagus irregu...
Feature 1     #                #         ##                                                   
1W3G_A     75 RRpa-------epYVGQIDGDGry--pDNWFKIEPGKTyl-skYFRLVQPstGTALVSRTHl-----qPYFWNHPQte-- 137 Laetiporus sulphureus
KIJ34088   77 RD-----------DAAYIDVDTq---aQDWFKFEPGTGqf-tkSFRLIAPdqNQVIFSRTDq-----ePFLGCINAgq-- 134 Sphaerobolus stell...
KUI56236   81 RThk-------spPVGSIAGDGqy--dDNYFKLEPGRGey-dgYFRLRNYhsDTVLYSRRVpk----rEQIGNVPAsqh- 145 Valsa mali var. pyri
KUI65119   79 ATgekl---dlqqLNDTNEGHGp----SQWFQLVPGAGry-kgCFLIRQS--RTFLQSPVGegplkavRQPYHHPG---- 144 Valsa mali
CEL11276   76 KRg----------AIGMYEKSYy---eDQYFVFEPGSGqf-qgYFRLRNNysRTVIYDNGQ-------RGVGNFDAdg-- 132 Aspergillus calido...
OJJ36420   80 RSgm-------apYVETNEDDEtn--pLHYFKIEPGSGay-agCFRLKNYqsECYLISRTSp-----ePHVYNCWPsd-- 142 Aspergillus wentii...
OQE08375   77 RPgemegcrfqpvDVRNIFDDS-----FMRFTFQPAVVdrfagHFRIVSAa-GRILASKRSyk---dgTFWDNFPAlfll 147 Penicillium vulpinum
RVD88913   80 NRg----------KAGTFDFNSsf--dDQFFSFEAGTGsr-vgTFRLVCPatNAVLFSRANss----dPPVGSIPAga-- 140 Arthrobotrys flagrans
VDB94525   76 NAsg-------ypSLGSTDWDCqsemdGIWFELELDKGdf-egKFRFANKstDTVVFSRTQh-----hPQVDDINPip-- 140 Peniophora sp. CBM...
PKB97961   74 RFs----------QEPKFFTYTssefdDQYWTFVPGTGkr-sgYFRIENYvtKWAIFSRFSk-----ePQLSHYISsd-- 135 Rhizophagus irregu...
Feature 1                       
1W3G_A    138 -------vFDDQYFTFLF 148 Laetiporus sulphureus
KIJ34088  135 -------vYRDQLFNFVW 145 Sphaerobolus stellatus SS14
KUI56236  146 ------srTGDQYFRFLY 157 Valsa mali var. pyri
KUI65119  145 --------LAEEYFSFAF 154 Valsa mali
CEL11276  133 ------ekYSDQYFSFLE 144 Aspergillus calidoustus
OJJ36420  143 ------pvADEQYFKFDF 154 Aspergillus wentii DTO 134E9
OQE08375  148 sqdanhsdSPEQYFSFVF 165 Penicillium vulpinum
RVD88913  141 -------fFDDQWFSFAY 151 Arthrobotrys flagrans
VDB94525  141 ------qpSSDQHLTLLF 152 Peniophora sp. CBMAI 1063
PKB97961  136 -------kFDDQYWSFIF 146 Rhizophagus irregularis

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