#Batch CD-search tool	NIH/NLM/NCBI
#cdsid	QM2-qcdsearch-60564CCEC660B523-580FDC0766A37793
#datatype	aligns
#status	0
#Start time	2010-11-01T10:12:02	Run time	0:00:00:00
#status	success	msg	

Q#1 - NP_000240

>gnl|cdd|48471 MutL_Trans_MLH1(Specific), 48471, cd03483
TopoII_MutL_Trans(Superfamily), 
155101, cl02783
Length=127

 Score =  212 bits (542),  Expect = 2e-55
 Identities = 84/127 (67%), Gaps = 2/127 (1%)
 Strand=Plus/Plus

Query  211  STVDNIRSIFGNAVSRELIEIGCEDKT--LAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLL  335
            || |||||  | ||  ||||    |    | ||  | ||||||| || || |||| ||||   || ||| ||| ||||  ||| |||||| | |||||||||| ||||| || | || |   | || 
Sbjct  1    STKDNIRSVYGAAVANELIEVEISDDDDDLGFKVKGLISNANYSKKKIIFILFINNRLVECSALRRAIENVYANYLPKGAHPFVYLSLEIPPENVDVNVHPTKREVHFLNEEEIIERIQKLVEDKLS  127



>gnl|cdd|173995 HATPase_c(Superfamily), 173995, cl00075
Length=111

 Score = 45.8 bits (109),  Expect = 3e-05
 Identities = 21/97 (22%), Gaps = 5/97 (5%)
 Strand=Plus/Plus

Query  31   AIKEMIENCLDA--KSTSIQVIVK-EGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKC  124
                   |          | |     ||   |   ||| ||  |||    | |      |          |          |    |       |  
Sbjct  9    VLSNLLDNAIKHAPAGGEIEVTLERDGGRLRITVEDNGIGIPPEDLPKIFEPFFRTDKDS--RKVGGTGLGLSIVRKLVELHGGTITVESEPGGGTT  103



>gnl|cdd|161941 mutl(Multidom), 161941, TIGR00585, DNA mismatch repair protein 
MutL
Length=312

 Score =  420 bits (1082),  Expect = 5e-118
 Identities = 153/314 (49%), Gaps = 6/314 (1%)
 Strand=Plus/Plus

Query  6    GVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKT-ADGKCAYRASYSD  132
              |  |    || ||||||| |||   ||  || |||  | | |   |||||||   ||| || ||||   |||  ||| ||||||  | | ||||||||||| |   |||||| |    |  |    
Sbjct  1    MTIKPLPPELVNKIAAGEVIERPASVVKELVENSLDAGATRIDVEIEEGGLKLIEVSDNGSGIDKEDLPLACERHATSKIQSFEDLERIETLGFRGEALASISSVSRLTITTKTSAADGLAWQALL-E  127

Query  133  GKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDN-IRSIFGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCI--  257
            |      ||     ||   | |||||   ||| || |  |  |||    ||       |||    |  |    | || |     ||| || ||   |     |         | ||  |         
Sbjct  128  GGMIEEIKPAPRPVGTTVEVRDLFYNLPVRRKFLKSPKKEFRKILDLLNRYALIHPDVSFSLTHDGKKVLQLSTKPNQSLKERRIRSVFGTAVLSKLFPLL-EWEDGDLQLEGFISEPNVTRSRRSGW  254

Query  258  FLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVH  315
              |||| | ||   | |||  ||  ||||   |   | ||| |  ||||||| | || 
Sbjct  255  QFLFINGRPVELKLLLKAIREVYHEYLPKGQYPVFVLNLEIDPELVDVNVHPDKKEVR  312