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Conserved domains on  [gi|269914457|pdb|3HG4|A]
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Chain A, Alpha-galactosidase A

Protein Classification

alpha-galactosidase( domain architecture ID 13873254)

alpha-galactosidase hydrolyses the terminal alpha-galactosyl moieties from glycolipids and glycoproteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Melibiase_2 pfam16499
Alpha galactosidase A;
8-291 0e+00

Alpha galactosidase A;


:

Pssm-ID: 374582 [Multi-domain]  Cd Length: 284  Bit Score: 604.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A          8 TPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIR 87
Cdd:pfam16499   1 TPPMGWLHWERFRCNIDCDDDPENCISEQLFMQMADRMAEDGWKDAGYEYVCIDDCWMSKERDKQGRLQADPKRFPSGIK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         88 QLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcDSLENLADGYKHMSLALNRTGRSI 167
Cdd:pfam16499  81 KLADYVHSKGLKLGIYADVGTKTCAGYPGSLGYYDIDAKTFADWGVDLLKFDGCY-SNLEDLVEGYPNMSFALNKTGRPI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        168 VYSCEWPLYM-WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSW 246
Cdd:pfam16499 160 VYSCEWPLYMgGLPQQVNYTEIRKYCNHWRNYDDIQDSWDSVKSIVDWFADNQDVFVPAAGPGGWNDPDMLIIGNFGLSY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
3HG4_A        247 NQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 291
Cdd:pfam16499 240 DQQRTQMALWAIMAAPLFMSNDLRSISPEAKAILQNKDVIAINQD 284
Melibiase_2_C pfam17450
Alpha galactosidase A C-terminal beta sandwich domain;
294-380 4.07e-42

Alpha galactosidase A C-terminal beta sandwich domain;


:

Pssm-ID: 407508 [Multi-domain]  Cd Length: 86  Bit Score: 142.87  E-value: 4.07e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        294 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKrKLGFYEWTSRLR 373
Cdd:pfam17450   1 GKQGRRLKKKDNIEVWERPLSDNSLAVAVLNRREIGMPYRYTLSLAKLGYGKVCSPACNVTDIFPGK-KLGVFELTSNLV 79

                  ....*..
3HG4_A        374 SHINPTG 380
Cdd:pfam17450  80 VSVNPTG 86
 
Name Accession Description Interval E-value
Melibiase_2 pfam16499
Alpha galactosidase A;
8-291 0e+00

Alpha galactosidase A;


Pssm-ID: 374582 [Multi-domain]  Cd Length: 284  Bit Score: 604.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A          8 TPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIR 87
Cdd:pfam16499   1 TPPMGWLHWERFRCNIDCDDDPENCISEQLFMQMADRMAEDGWKDAGYEYVCIDDCWMSKERDKQGRLQADPKRFPSGIK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         88 QLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcDSLENLADGYKHMSLALNRTGRSI 167
Cdd:pfam16499  81 KLADYVHSKGLKLGIYADVGTKTCAGYPGSLGYYDIDAKTFADWGVDLLKFDGCY-SNLEDLVEGYPNMSFALNKTGRPI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        168 VYSCEWPLYM-WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSW 246
Cdd:pfam16499 160 VYSCEWPLYMgGLPQQVNYTEIRKYCNHWRNYDDIQDSWDSVKSIVDWFADNQDVFVPAAGPGGWNDPDMLIIGNFGLSY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
3HG4_A        247 NQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 291
Cdd:pfam16499 240 DQQRTQMALWAIMAAPLFMSNDLRSISPEAKAILQNKDVIAINQD 284
GH27 cd14792
glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and ...
9-291 3.14e-141

glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.


Pssm-ID: 269893 [Multi-domain]  Cd Length: 271  Bit Score: 402.70  E-value: 3.14e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        9 PTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQ 88
Cdd:cd14792   1 PPMGWNSWNAFGCN----------INEKLIKATADAMVSSGLRDAGYEYVNIDDGWQAKRRDADGRLVPDPTRFPSGMKA 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       89 LANYVHSKGLKLGIYADVGNKTCA--GFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSL-ENLADGYKHMSLALNRTGR 165
Cdd:cd14792  71 LADYVHSKGLKFGIYSDAGTPTCAdgGYPGSLGHEDSDAATFASWGVDYLKYDGCGAPSGrLDAQERYTAMSDALNATGR 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A      166 SIVYSCEWPLYMwpfqkPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVdVAGPGGWNDPDMLVIGNFGL- 244
Cdd:cd14792 151 PIVLSLSWWGYP-----DPWGWAAEIANSWRTTGDIWDSWTSVLSIIDQFADLAEYAA-PAGPGHWNDPDMLEVGNGGLg 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
3HG4_A      245 SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 291
Cdd:cd14792 225 TDDEQRTHFSLWAIMASPLILGNDLRNLDDETLALLTNPEVIAVNQD 271
PLN02808 PLN02808
alpha-galactosidase
1-325 2.46e-97

alpha-galactosidase


Pssm-ID: 166449 [Multi-domain]  Cd Length: 386  Bit Score: 295.33  E-value: 2.46e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         1 LDNGLARTPTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80
Cdd:PLN02808  24 LDNGLGLTPQMGWNSWNHFQCN----------INETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKAS 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENlADGYKHMSLA 159
Cdd:PLN02808  94 TFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKtMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSP-QERYPKMSKA 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       160 LNRTGRSIVYS-CEWPlymwpfQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILD----WTSFnqerivdvAGPGGWNDP 234
Cdd:PLN02808 173 LLNSGRPIFFSlCEWG------QEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADqndrWASY--------ARPGGWNDP 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       235 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 314
Cdd:PLN02808 239 DMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGDLEVWAGPLS 318
                        330
                 ....*....|.
3HG4_A       315 GLAWAVAMINR 325
Cdd:PLN02808 319 KKRVAVVLWNR 329
Melibiase_2_C pfam17450
Alpha galactosidase A C-terminal beta sandwich domain;
294-380 4.07e-42

Alpha galactosidase A C-terminal beta sandwich domain;


Pssm-ID: 407508 [Multi-domain]  Cd Length: 86  Bit Score: 142.87  E-value: 4.07e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        294 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKrKLGFYEWTSRLR 373
Cdd:pfam17450   1 GKQGRRLKKKDNIEVWERPLSDNSLAVAVLNRREIGMPYRYTLSLAKLGYGKVCSPACNVTDIFPGK-KLGVFELTSNLV 79

                  ....*..
3HG4_A        374 SHINPTG 380
Cdd:pfam17450  80 VSVNPTG 86
GalA COG3345
Alpha-galactosidase [Carbohydrate transport and metabolism];
3-103 7.93e-13

Alpha-galactosidase [Carbohydrate transport and metabolism];


Pssm-ID: 442574 [Multi-domain]  Cd Length: 219  Bit Score: 67.31  E-value: 7.93e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        3 NGLARTPTMGWLHWERFmcnldcqeEPDscISEKLFMEMAELMvsegwKDAGYEYLCIDDCWMAPQRD---SEGRLQADP 79
Cdd:COG3345  28 GPPDKPRPVGWNSWEAY--------YFD--FTEEKLLALADAA-----AELGVELFVLDDGWFGGRRDdtaGLGDWLVDP 92
                        90       100
                ....*....|....*....|....
3HG4_A       80 QRFPHGIRQLANYVHSKGLKLGIY 103
Cdd:COG3345  93 EKFPNGLKPLADRIHALGMKFGLW 116
 
Name Accession Description Interval E-value
Melibiase_2 pfam16499
Alpha galactosidase A;
8-291 0e+00

Alpha galactosidase A;


Pssm-ID: 374582 [Multi-domain]  Cd Length: 284  Bit Score: 604.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A          8 TPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIR 87
Cdd:pfam16499   1 TPPMGWLHWERFRCNIDCDDDPENCISEQLFMQMADRMAEDGWKDAGYEYVCIDDCWMSKERDKQGRLQADPKRFPSGIK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         88 QLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcDSLENLADGYKHMSLALNRTGRSI 167
Cdd:pfam16499  81 KLADYVHSKGLKLGIYADVGTKTCAGYPGSLGYYDIDAKTFADWGVDLLKFDGCY-SNLEDLVEGYPNMSFALNKTGRPI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        168 VYSCEWPLYM-WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSW 246
Cdd:pfam16499 160 VYSCEWPLYMgGLPQQVNYTEIRKYCNHWRNYDDIQDSWDSVKSIVDWFADNQDVFVPAAGPGGWNDPDMLIIGNFGLSY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
3HG4_A        247 NQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 291
Cdd:pfam16499 240 DQQRTQMALWAIMAAPLFMSNDLRSISPEAKAILQNKDVIAINQD 284
GH27 cd14792
glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and ...
9-291 3.14e-141

glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.


Pssm-ID: 269893 [Multi-domain]  Cd Length: 271  Bit Score: 402.70  E-value: 3.14e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        9 PTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQ 88
Cdd:cd14792   1 PPMGWNSWNAFGCN----------INEKLIKATADAMVSSGLRDAGYEYVNIDDGWQAKRRDADGRLVPDPTRFPSGMKA 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       89 LANYVHSKGLKLGIYADVGNKTCA--GFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSL-ENLADGYKHMSLALNRTGR 165
Cdd:cd14792  71 LADYVHSKGLKFGIYSDAGTPTCAdgGYPGSLGHEDSDAATFASWGVDYLKYDGCGAPSGrLDAQERYTAMSDALNATGR 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A      166 SIVYSCEWPLYMwpfqkPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVdVAGPGGWNDPDMLVIGNFGL- 244
Cdd:cd14792 151 PIVLSLSWWGYP-----DPWGWAAEIANSWRTTGDIWDSWTSVLSIIDQFADLAEYAA-PAGPGHWNDPDMLEVGNGGLg 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
3HG4_A      245 SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 291
Cdd:cd14792 225 TDDEQRTHFSLWAIMASPLILGNDLRNLDDETLALLTNPEVIAVNQD 271
PLN02808 PLN02808
alpha-galactosidase
1-325 2.46e-97

alpha-galactosidase


Pssm-ID: 166449 [Multi-domain]  Cd Length: 386  Bit Score: 295.33  E-value: 2.46e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         1 LDNGLARTPTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80
Cdd:PLN02808  24 LDNGLGLTPQMGWNSWNHFQCN----------INETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKAS 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENlADGYKHMSLA 159
Cdd:PLN02808  94 TFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKtMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSP-QERYPKMSKA 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       160 LNRTGRSIVYS-CEWPlymwpfQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILD----WTSFnqerivdvAGPGGWNDP 234
Cdd:PLN02808 173 LLNSGRPIFFSlCEWG------QEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADqndrWASY--------ARPGGWNDP 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       235 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 314
Cdd:PLN02808 239 DMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGDLEVWAGPLS 318
                        330
                 ....*....|.
3HG4_A       315 GLAWAVAMINR 325
Cdd:PLN02808 319 KKRVAVVLWNR 329
PLN02229 PLN02229
alpha-galactosidase
1-325 1.89e-95

alpha-galactosidase


Pssm-ID: 177874 [Multi-domain]  Cd Length: 427  Bit Score: 292.23  E-value: 1.89e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         1 LDNGLARTPTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80
Cdd:PLN02229  55 LNNGLARTPQMGWNSWNFFACN----------INETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPK 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcdsleNLA----DGYKHM 156
Cdd:PLN02229 125 TFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNCY-----NLGikpiERYPPM 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       157 SLALNRTGRSIVYS-CEWPL---YMWPfqkpnyteiRQYCNHWRNFADIDDSWKSIKSILD----WTSFnqerivdvAGP 228
Cdd:PLN02229 200 RDALNATGRSIFYSlCEWGVddpALWA---------GKVGNSWRTTDDINDTWASMTTIADlnnkWAAY--------AGP 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       229 GGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLR-QGDN-- 305
Cdd:PLN02229 263 GGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKEVIAVNQDPLGVQGRKIQaNGKNgc 342
                        330       340
                 ....*....|....*....|
3HG4_A       306 FEVWERPLSGLAWAVAMINR 325
Cdd:PLN02229 343 QQVWAGPLSGDRLVVALWNR 362
PLN02692 PLN02692
alpha-galactosidase
1-337 2.74e-92

alpha-galactosidase


Pssm-ID: 178295 [Multi-domain]  Cd Length: 412  Bit Score: 283.47  E-value: 2.74e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         1 LDNGLARTPTMGWLHWERFMCNLDcqeepdscisEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80
Cdd:PLN02692  48 LANGLGITPPMGWNSWNHFSCKID----------EKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKKS 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENlADGYKHMSLA 159
Cdd:PLN02692 118 TFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKtMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDGSKP-TVRYPVMTRA 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       160 LNRTGRSIVYS-CEW----PLyMWPfqkpnyteiRQYCNHWRNFADIDDSWKSIKSILDWtsfnQERIVDVAGPGGWNDP 234
Cdd:PLN02692 197 LMKAGRPIFFSlCEWgdmhPA-LWG---------SKVGNSWRTTNDISDTWDSMISRADM----NEVYAELARPGGWNDP 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       235 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 314
Cdd:PLN02692 263 DMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVANKEVIAVNQDPLGVQAKKVRMEGDLEIWAGPLS 342
                        330       340
                 ....*....|....*....|...
3HG4_A       315 GLAWAVAMINRqeigGPRSYTIA 337
Cdd:PLN02692 343 GYRVALLLLNR----GPWRNSIT 361
GH_D cd14790
Glycoside hydrolases, clan D; This group of glycosyl hydrolase families is comprised of ...
9-286 7.65e-49

Glycoside hydrolases, clan D; This group of glycosyl hydrolase families is comprised of glycosyl hydrolase family 31 (GH31), family 36 (GH36), and family 27 (GH27). These structurally and mechanistically related protein families are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. They have a wide range of functions including alpha-glucosidase, alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase, alpha-N-acetylgalactosaminidase, stachyose synthase, raffinose synthase, and alpha-1,4-glucan lyase.


Pssm-ID: 269891 [Multi-domain]  Cd Length: 253  Bit Score: 165.87  E-value: 7.65e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        9 PTMGWLHWERFMcnldcqeepdSCISEKLFMEMAELMVSEGWkdaGYEYLCIDDCWMApqRDSEGRLQADPQRFPHGiRQ 88
Cdd:cd14790   1 PPMGWLTWERYR----------QDIDEMLFMEMADRIAEDEL---PYKVFNIDDCWAK--KDAEGDFVPDPERFPRG-EA 64
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       89 LANYVHSKGLKLGIYADvgnktcagfPGSFGYYDIDAQTFADWGVDLLKFDGCYC-----------DSLENLADGYKHMS 157
Cdd:cd14790  65 MARRLHARGLKLGIWGD---------PFRLDWVEDDLQTLAEWGVDMFKLDFGESsgtpvqwfpqkMPNKEQAQGYEQMA 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A      158 LALNRTGRSIVYSCEWPLYMWPFQKpnyteirqyCNHWRNFADIDDSWKSIKSILDWTSFNQerIVDVAGPGGWNDPDML 237
Cdd:cd14790 136 RALNATGEPIVYSGSWSAYQGGGEI---------CNLWRNYDDIQDSWDAVLSIVDWFFTNQ--DVLQAGGFHFNDPDML 204
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
3HG4_A      238 VIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVI 286
Cdd:cd14790 205 IIGNFGLSAEQSRSQMALWTIMDAPLLMSTDLSTISPSDKKILVNRLMI 253
Melibiase_2_C pfam17450
Alpha galactosidase A C-terminal beta sandwich domain;
294-380 4.07e-42

Alpha galactosidase A C-terminal beta sandwich domain;


Pssm-ID: 407508 [Multi-domain]  Cd Length: 86  Bit Score: 142.87  E-value: 4.07e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        294 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKrKLGFYEWTSRLR 373
Cdd:pfam17450   1 GKQGRRLKKKDNIEVWERPLSDNSLAVAVLNRREIGMPYRYTLSLAKLGYGKVCSPACNVTDIFPGK-KLGVFELTSNLV 79

                  ....*..
3HG4_A        374 SHINPTG 380
Cdd:pfam17450  80 VSVNPTG 86
PLN03231 PLN03231
putative alpha-galactosidase; Provisional
33-299 5.03e-24

putative alpha-galactosidase; Provisional


Pssm-ID: 178770 [Multi-domain]  Cd Length: 357  Bit Score: 101.98  E-value: 5.03e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        33 ISEKLFMEMAELmVSEGWKDAGYEYLCIDDCWMAPQR----------------DSEGRLQADPQRFP-----HGIRQLAN 91
Cdd:PLN03231  15 ISEEQFLENAKI-VSETLKPHGYEYVVIDYLWYRKLKhgwfktsakspgydliDKWGRPLPDPKRWPsttggKGFAPIAA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        92 YVHSKGLKLGIY-------ADVGNKT------------------------CAGFPGSFGYYDIDAQ-----------TFA 129
Cdd:PLN03231  94 KVHALGLKLGIHvmrgistTAVKKKTpilgafksnghawnakdialmdqaCPWMQQCFVGVNTSSEggklfiqslydQYA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       130 DWGVDLLKFDGCYCDSLENLaDGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKpnyTEIRQYCNHWRNFADIDDSWKSIK 209
Cdd:PLN03231 174 SWGIDFIKHDCVFGAENPQL-DEILTVSKAIRNSGRPMIYSLSPGDGATPGLA---ARVAQLVNMYRVTGDDWDDWKYLV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       210 SILDWT-SFNQERIVDVAGPGG---WNDPDMLVIG-------------NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHI 272
Cdd:PLN03231 250 KHFDVArDFAAAGLIAIPSVVGgksWVDLDMLPFGrltdpaaaygpyrNSRLSLEEKKTQMTLWAVAKSPLMFGGDLRRL 329
                        330       340
                 ....*....|....*....|....*..
3HG4_A       273 SPQAKALLQDKDVIAINQDPLGKQGYQ 299
Cdd:PLN03231 330 DNETLSLLTNPTVLEVNSHSTGNRNAQ 356
PLN02899 PLN02899
alpha-galactosidase
4-289 2.53e-23

alpha-galactosidase


Pssm-ID: 178487 [Multi-domain]  Cd Length: 633  Bit Score: 102.18  E-value: 2.53e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A         4 GLARTPTMGWLHWERFmcnldcqeepdsC--ISEKLFMEMAELmVSEGWKDAGYEYLCIDDCWMAPQR------------ 69
Cdd:PLN02899  26 QLASFPPRGWNSYDSF------------SwiVSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVegayvdslgfdv 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        70 -DSEGRLQADPQRFP-----HGIRQLANYVHSKGLKLGIY----------------------------------ADVG-- 107
Cdd:PLN02899  93 iDEWGRPIPDPGRWPssrggKGFTEVAEKVHAMGLKFGIHvmrgistqavnantpildavkggayeesgrqwraKDIAlk 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       108 NKTCAGFPGSFGYYDIDA-----------QTFADWGVDLLKFDGCYCDSLEnlADGYKHMSLALNRTGRSIVYSCEWPLY 176
Cdd:PLN02899 173 ERACAWMSHGFMSVNTKLgagkaflrslyDQYAEWGVDFVKHDCVFGDDFD--LEEITYVSEVLKELDRPIVYSLSPGTS 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       177 MWPFQKpnyTEIRQYCNHWRNFADIDDSWKSIKSILDWT-SFNQERIVDVAGPGG--WNDPDMLVIG-------NFG--- 243
Cdd:PLN02899 251 ATPTMA---KEVSGLVNMYRITGDDWDTWGDVAAHFDVSrDFAAAGLIGAKGLRGrsWPDLDMLPLGwltdpgsNVGphr 327
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
3HG4_A       244 ---LSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAIN 289
Cdd:PLN02899 328 acnLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLITNPTLLEIN 376
GH36 cd14791
glycosyl hydrolase family 36 (GH36); GH36 enzymes occur in prokaryotes, eukaryotes, and ...
12-282 6.53e-13

glycosyl hydrolase family 36 (GH36); GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.


Pssm-ID: 269892 [Multi-domain]  Cd Length: 299  Bit Score: 68.79  E-value: 6.53e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       12 GWLHWERFMCNldcqeepdscISEKLFMEMAELMvsegwKDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQ 88
Cdd:cd14791   5 GWNSWYAYYFD----------ITEEKLLELADAA-----AELGVELFVIDDGWFGARNDDYAGLgdwLVDPEKFPDGLKA 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A       89 LANYVHSKGLKLGI-----YADVGNKTCAGFP------------GSFGYY--DI---DAQTF---------ADWGVDLLK 137
Cdd:cd14791  70 LADRIHALGMKFGLwlepeMVGPDSELYREHPdwllkdpggppvTGRNQYvlDLsnpEVRDYlrevidrllREWGIDYLK 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A      138 FDGCY------CDSLENLADGYKHMSLAL--------NRTGRSIVYSC--EWPLYMWPfqkpnyteIRQYCNHWRnFADI 201
Cdd:cd14791 150 WDFNRagaeggSRALDSQGEGLHRYVEALyrlldrlrEAFPDVLIEGCssGGGRPDLG--------MLGYVDQFR-ISDN 220
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A      202 DDSwKSIKSILDWTSFnqerivdvAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQ 281
Cdd:cd14791 221 TDA-LERLRIQAGRSL--------LYPPEAMDPDVVLLPNHQTGRLEPLETRAAVAMLGGRLGLSDDLTKLSEEELELLK 291

                .
3HG4_A      282 D 282
Cdd:cd14791 292 E 292
GalA COG3345
Alpha-galactosidase [Carbohydrate transport and metabolism];
3-103 7.93e-13

Alpha-galactosidase [Carbohydrate transport and metabolism];


Pssm-ID: 442574 [Multi-domain]  Cd Length: 219  Bit Score: 67.31  E-value: 7.93e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3HG4_A        3 NGLARTPTMGWLHWERFmcnldcqeEPDscISEKLFMEMAELMvsegwKDAGYEYLCIDDCWMAPQRD---SEGRLQADP 79
Cdd:COG3345  28 GPPDKPRPVGWNSWEAY--------YFD--FTEEKLLALADAA-----AELGVELFVLDDGWFGGRRDdtaGLGDWLVDP 92
                        90       100
                ....*....|....*....|....
3HG4_A       80 QRFPHGIRQLANYVHSKGLKLGIY 103
Cdd:COG3345  93 EKFPNGLKPLADRIHALGMKFGLW 116
Melibiase pfam02065
Melibiase; Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan ...
51-103 1.66e-05

Melibiase; Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.


Pssm-ID: 307952  Cd Length: 347  Bit Score: 46.62  E-value: 1.66e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
3HG4_A         51 KDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQLANYVHSKGLKLGIY 103
Cdd:pfam02065  68 ADLGIELFVLDDGWFGHRNDDNSSLgdwFVNPRKFPNGLDPLAKQVHALGMQFGLW 123
Melibiase_C pfam17801
Alpha galactosidase C-terminal beta sandwich domain; This domain is found at the C-terminus of ...
303-342 2.29e-03

Alpha galactosidase C-terminal beta sandwich domain; This domain is found at the C-terminus of alpha galactosidase enzymes.


Pssm-ID: 465512 [Multi-domain]  Cd Length: 74  Bit Score: 36.46  E-value: 2.29e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
3HG4_A        303 GDNFEVWERPLSGLAWAVAMINRqeiGGPRSYTIAVASLG 342
Cdd:pfam17801   1 DGDLQVWAKPLSNGDVAVALFNR---GGPSTVTVDLSDLG 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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