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Concise Results
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Chain RQ, U3 small nucleolar RNA-associated protein 14
Protein Classification
COG5644 family protein ( domain architecture ID 11475747 )
COG5644 family protein
List of domain hits
Name
Accession
Description
Interval
E-value
COG5644
COG5644 U3 small nucleolar RNA-associated protein 14 [Function unknown];
1-898
0e+00
U3 small nucleolar RNA-associated protein 14 [Function unknown];
Pssm-ID: 227931 [Multi-domain]
Cd Length: 869
Bit Score: 1064.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 1 MAKKKS K SRS K SSRRVLDALQLAER E INGE FD NSSDN D KRHDARRN G tv VN LLKRSKG D TNSDE D DI D SES F E D EEL N SD 80
Cdd:COG5644 1 LPQPQG K HQR K GKKQLENKILHSYE E ESAG FD SEELE D NDEQGYSF G -- VN SEDDEEI D SDEAF D EE D EKR F A D WSF N AS 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 81 EALG S DD D YDI LN SKFSQTIR D KKENA N YQEE E D EG GYT SIDE ED L MP L SQVW D M D EKTAQSN GN D D EDASPQLK L QDTD 160
Cdd:COG5644 79 KSGK S NK D HKN LN NTKEISLN D SDDSV N SDKL E N EG SVS SIDE NE L VD L DTLL D N D QPEKNES GN N D HATDKENL L ESDA 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 161 I SS ES S S SEES E SESE DDEEEE D PF DE I S EDEE D IEL N T I T S KLI DE TKSKAPKRL D TYG S G E ANE Y VLPSA N AA SG A S G 240
Cdd:COG5644 159 S SS ND S E SEES D SESE IESSDS D HD DE N S DSKL D NLR N Y I V S LKK DE ADAESVLSS D DND S I E EIK Y DPHET N KE SG S S E 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 241 KLSL TD MMNV I DDR Q VIENANL L KGK SS TYEV PL PQR IQ Q R HD R K AAYE ISRQEVS KW ND IV QQ NR RA D H LIFP L N KPTE 320
Cdd:COG5644 239 TIDI TD LLDS I PME Q LKVSLKP L VSE SS KLDA PL AKS IQ D R LE R Q AAYE QTKNDLE KW KP IV AD NR KS D Q LIFP M N ETAR 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 321 HNHASAFTRTQDV P Q TE LQE K VD Q V L QESN L A N PEKDS K F EEL STA K MTP EE MRK RT TEM R L MRELMFREERKA R R LK KI 400
Cdd:COG5644 319 PVPSNNGLASSFE P R TE SER K MH Q A L LDAG L E N ESALK K Q EEL ALN K LSV EE VAE RT RQL R F MRELMFREERKA K R VA KI 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 401 KSKTYRKI K K KELM K NRE L AAV S S D ED NE DHDI ARA K ERMT LK HK TN S K W AKD M IKH g MTNDAE TRE EME E ML R Q G ER L K 480
Cdd:COG5644 399 KSKTYRKI R K NRKE K EMA L IPK S E D LE NE KSEE ARA L ERMT QR HK NT S S W TRK M LER - ASHGEG TRE AVN E QI R K G DE L M 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 481 AKMLDRNSD D E ED GRVQTL SD VENE E KENIDS E ALKSKLGKT GV MN M A FM KNGEA R ERE A N K ETLRQ L RA VENGDDI KLF 560
Cdd:COG5644 478 QRIHGKEIM D G ED VSEFSD SD YDTN E QVSTAF E KIRNEEELK GV LG M K FM RDASN R QMA A S K ISVAD L VK VENGDDI DVG 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 561 E S D ee E TN G EN I QI N K GRR IYT P G sles NKDMNE L NDHT RKE NK V DE S R SLE NRLRAKNS GQ S K nart N AEGA IIV E EE s 640
Cdd:COG5644 558 E L D -- E VG G DA I YA N A GRR EVF P V ---- VEQRRK L APRK RKE DF V TP S T SLE KSMDRILH GQ K K ---- R AEGA VVF E KP - 626
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 641 dgeplqdgqnnqq D E EAKDV NPWL ANESDEEHTV KK QSSKVNVI DK DSS K NVKAMNKMEKAE L KQK KK KK G KSN D DEDLL 720
Cdd:COG5644 627 ------------- L E ATENF NPWL DRKMRRIKRI KK KAYRRIRR DK RLK K KMPEEENTQENH L GSE KK RH G GVP D ILLKE 693
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 721 LTAD D STRLK I VD P Y G GSDD E Q G dn VFMFK Q QDVI A E AFAGDDVVAEF Q EEK KRVIDD E DD KE V D TT LPGWGEWAG A G S K 800
Cdd:COG5644 694 IEVE D DEKTP I LS P G G DEEV E E G -- LSIKT Q EELV A L AFAGDDVVAEF E EEK REIVNR E AP KE E D VV LPGWGEWAG P G L K 771
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 801 PKN KK RKFI KKV K G VVNKD KR R D K NL QN VIINEKVNKK NL K YQSSA VPFPFE N REQYERSL RM PIG Q EWT S RASH QE L IK 880
Cdd:COG5644 772 VIK KK SNTV KKV V G GIKYS KR K D F NL SH VIINEKVNKK DK K FLADE VPFPFE T REQYERSL NA PIG R EWT T RASH KR L VR 851
890
....*....|....*...
6KE6_RQ 881 PR IM TK P G Q VI D P L KAP F 898
Cdd:COG5644 852 PR TR TK N G E VI E P F KAP P 869
Name
Accession
Description
Interval
E-value
COG5644
COG5644 U3 small nucleolar RNA-associated protein 14 [Function unknown];
1-898
0e+00
U3 small nucleolar RNA-associated protein 14 [Function unknown];
Pssm-ID: 227931 [Multi-domain]
Cd Length: 869
Bit Score: 1064.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 1 MAKKKS K SRS K SSRRVLDALQLAER E INGE FD NSSDN D KRHDARRN G tv VN LLKRSKG D TNSDE D DI D SES F E D EEL N SD 80
Cdd:COG5644 1 LPQPQG K HQR K GKKQLENKILHSYE E ESAG FD SEELE D NDEQGYSF G -- VN SEDDEEI D SDEAF D EE D EKR F A D WSF N AS 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 81 EALG S DD D YDI LN SKFSQTIR D KKENA N YQEE E D EG GYT SIDE ED L MP L SQVW D M D EKTAQSN GN D D EDASPQLK L QDTD 160
Cdd:COG5644 79 KSGK S NK D HKN LN NTKEISLN D SDDSV N SDKL E N EG SVS SIDE NE L VD L DTLL D N D QPEKNES GN N D HATDKENL L ESDA 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 161 I SS ES S S SEES E SESE DDEEEE D PF DE I S EDEE D IEL N T I T S KLI DE TKSKAPKRL D TYG S G E ANE Y VLPSA N AA SG A S G 240
Cdd:COG5644 159 S SS ND S E SEES D SESE IESSDS D HD DE N S DSKL D NLR N Y I V S LKK DE ADAESVLSS D DND S I E EIK Y DPHET N KE SG S S E 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 241 KLSL TD MMNV I DDR Q VIENANL L KGK SS TYEV PL PQR IQ Q R HD R K AAYE ISRQEVS KW ND IV QQ NR RA D H LIFP L N KPTE 320
Cdd:COG5644 239 TIDI TD LLDS I PME Q LKVSLKP L VSE SS KLDA PL AKS IQ D R LE R Q AAYE QTKNDLE KW KP IV AD NR KS D Q LIFP M N ETAR 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 321 HNHASAFTRTQDV P Q TE LQE K VD Q V L QESN L A N PEKDS K F EEL STA K MTP EE MRK RT TEM R L MRELMFREERKA R R LK KI 400
Cdd:COG5644 319 PVPSNNGLASSFE P R TE SER K MH Q A L LDAG L E N ESALK K Q EEL ALN K LSV EE VAE RT RQL R F MRELMFREERKA K R VA KI 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 401 KSKTYRKI K K KELM K NRE L AAV S S D ED NE DHDI ARA K ERMT LK HK TN S K W AKD M IKH g MTNDAE TRE EME E ML R Q G ER L K 480
Cdd:COG5644 399 KSKTYRKI R K NRKE K EMA L IPK S E D LE NE KSEE ARA L ERMT QR HK NT S S W TRK M LER - ASHGEG TRE AVN E QI R K G DE L M 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 481 AKMLDRNSD D E ED GRVQTL SD VENE E KENIDS E ALKSKLGKT GV MN M A FM KNGEA R ERE A N K ETLRQ L RA VENGDDI KLF 560
Cdd:COG5644 478 QRIHGKEIM D G ED VSEFSD SD YDTN E QVSTAF E KIRNEEELK GV LG M K FM RDASN R QMA A S K ISVAD L VK VENGDDI DVG 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 561 E S D ee E TN G EN I QI N K GRR IYT P G sles NKDMNE L NDHT RKE NK V DE S R SLE NRLRAKNS GQ S K nart N AEGA IIV E EE s 640
Cdd:COG5644 558 E L D -- E VG G DA I YA N A GRR EVF P V ---- VEQRRK L APRK RKE DF V TP S T SLE KSMDRILH GQ K K ---- R AEGA VVF E KP - 626
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 641 dgeplqdgqnnqq D E EAKDV NPWL ANESDEEHTV KK QSSKVNVI DK DSS K NVKAMNKMEKAE L KQK KK KK G KSN D DEDLL 720
Cdd:COG5644 627 ------------- L E ATENF NPWL DRKMRRIKRI KK KAYRRIRR DK RLK K KMPEEENTQENH L GSE KK RH G GVP D ILLKE 693
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 721 LTAD D STRLK I VD P Y G GSDD E Q G dn VFMFK Q QDVI A E AFAGDDVVAEF Q EEK KRVIDD E DD KE V D TT LPGWGEWAG A G S K 800
Cdd:COG5644 694 IEVE D DEKTP I LS P G G DEEV E E G -- LSIKT Q EELV A L AFAGDDVVAEF E EEK REIVNR E AP KE E D VV LPGWGEWAG P G L K 771
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 801 PKN KK RKFI KKV K G VVNKD KR R D K NL QN VIINEKVNKK NL K YQSSA VPFPFE N REQYERSL RM PIG Q EWT S RASH QE L IK 880
Cdd:COG5644 772 VIK KK SNTV KKV V G GIKYS KR K D F NL SH VIINEKVNKK DK K FLADE VPFPFE T REQYERSL NA PIG R EWT T RASH KR L VR 851
890
....*....|....*...
6KE6_RQ 881 PR IM TK P G Q VI D P L KAP F 898
Cdd:COG5644 852 PR TR TK N G E VI E P F KAP P 869
Utp14
pfam04615 Utp14 protein; This protein is found to be part of a large ribonucleoprotein complex ...
197-897
0e+00
Utp14 protein; This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome.
Pssm-ID: 461368 [Multi-domain]
Cd Length: 704
Bit Score: 638.23
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 197 L NT I TS kl I D ET K S K APKRLD T YGS G EAN E YV L P S anaasga S GKLSL T D MMNVID -- D RQVIENAN LL K -- G KS STYEV 272
Cdd:pfam04615 4 L SF I SG -- L D GK K K K RKLKDR T EEA G QES E FG L T S ------- G GKLSL A D LLLPLV kk D SSLKKSLK LL E ke K KS KKLAA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 273 PLP Q R I Q Q R H DRKAAYE ISRQ E VS KW NDI V QQ NRRA D HL I FPL NK P - T EHNHAS A FTRTQDV P Q TEL QE K VDQV L Q ES N L 351
Cdd:pfam04615 75 PLP K R Q Q D R L DRKAAYE KTKE E LD KW EPT V KR NRRA E HL S FPL QQ P d T VGKSTL A PLASKFK P R TEL EK K IASI L E ES G L 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 352 A NPE K DSK FEEL STA K MTP EE MRK R TT E M R L MRELMFREE R KA R R L KKIKSKTYR K I KK KE LM K N -------- R E L A AVS 423
Cdd:pfam04615 155 A EEK K LAT FEEL ALN K LSV EE VKE R RA E L R K MRELMFREE A KA K R I KKIKSKTYR R I HR KE RE K E aekeeeal A E A A LED 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 424 SD E DN E DHDIA RA K ERMTLKHK TN SKWAK D M I K H G MTN - D A ETR EEME E M LR Q GE R L KA K MLDRNSD D EE D GRVQTL SD V 502
Cdd:pfam04615 235 DE E ER E KQERK RA E ERMTLKHK NT SKWAK S M K K R G RAA w D E ETR AALA E Q LR R GE E L RR K IEGKDVS D DD D DSDDDS SD S 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 503 E N E E --------------- KE NIDSEALKSKLGKT G VMN M A FMK NG EAR ER E A N K E TLRQ LR aveng DDIKLFESDEEET 567
Cdd:pfam04615 315 E D E D dndaklvkrkklgkl KE LEEKAEEEEEGPES G LLS M K FMK RA EAR RK E E N D E EIEE LR ----- RELEQGDEEDGDE 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 568 NG E NI Q I N K GRR IYT PG SLESN ------ K DMNELNDHT R K E NKV D E S RS LE N R LRA K NSGQ S KNARTNA egaiiveeesd 641
Cdd:pfam04615 390 EE E EE Q G N V GRR VFG PG AKVKS lkskkk K SDSKVDSSK R E E FEE D K S KD LE D R AKK K KAKK S SKESKKL ----------- 458
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 642 geplq DGQNNQQD E EAKDV NPWL anes DE EH T V KK Q SSKV N V - I DK D SSK NV K AM NK ME K AEL K QKK KKK GKSN D --- D E 717
Cdd:pfam04615 459 ----- ASEAASEE E ADDES NPWL ---- DE SK T A KK T SSKV E V f V DK S SSK AT K SK NK IK K SKK K NSS KKK SSKD D ali D I 529
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 718 DL LL T AD D ST rlkiv D PYGGSDD E QG D NVFM FKQ Q D V IA E AFAGDDVVAEF QE EKKRVI DD ED D KE V D T TLPGWG E WAG A 797
Cdd:pfam04615 530 DL SN T LK D ES ----- D DDDDDEE E EV D LPVA FKQ R D L IA R AFAGDDVVAEF EK EKKRVI EE ED P KE I D N TLPGWG S WAG D 604
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 798 G S K PKN KK RKFIK K VKGV V N K D KR R D KN L Q NVIINEK VN KKN L KY QS S AV PFPFE NR EQYERSLRMPIG Q EW TSRASH Q E 877
Cdd:pfam04615 605 G V K KRE KK KRKFL K KVEG V K K K KR K D AK L K NVIINEK RD KKN A KY LA S QL PFPFE SK EQYERSLRMPIG P EW NTKETF Q K 684
730 740
....*....|....*....|
6KE6_RQ 878 L I KPR IM TK P G QV I D PLK A P 897
Cdd:pfam04615 685 L T KPR VV TK Q G VI I K PLK K P 704
PTZ00121
PTZ00121 MAEBL; Provisional
276-719
1.53e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 48.98
E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 276 QRIQQRH D R K A A YEISRQ E VS K WND iv QQNRR A DHL - IFPLNKPT E HNHASA F T R T Q DVPQT E LQE K V D QVLQESNLANP 354
Cdd:PTZ00121 1215 EEARKAE D A K K A EAVKKA E EA K KDA -- EEAKK A EEE r NNEEIRKF E EARMAH F A R R Q AAIKA E EAR K A D ELKKAEEKKKA 1292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 355 EKDS K F EE LST A kmtp E E MR K RTT E MRLMR E LMFRE E RKARRLKKI K S K TYRKI K KK E LM K NREL AA vs S DE DNEDHDI A 434
Cdd:PTZ00121 1293 DEAK K A EE KKK A ---- D E AK K KAE E AKKAD E AKKKA E EAKKKADAA K K K AEEAK K AA E AA K AEAE AA -- A DE AEAAEEK A 1366
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 435 R A K E RMTLKH K TNSKW AK dmikhgmt ND AE TREEME E MLRQG E RL K A K MLDRNSDDEEDGRVQTLSDVEN E E K E nid SEA 514
Cdd:PTZ00121 1367 E A A E KKKEEA K KKADA AK -------- KK AE EKKKAD E AKKKA E ED K K K ADELKKAAAAKKKADEAKKKAE E K K K --- ADE 1435
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 515 L K S K LGKTGVMNM A FM K NG EA RER E AN K ETLRQLRAVE ngddi KLFESD EE ETNGENIQ inkgrriyt PGSL E SN K DMN E 594
Cdd:PTZ00121 1436 A K K K AEEAKKADE A KK K AE EA KKA E EA K KKAEEAKKAD ----- EAKKKA EE AKKADEAK --------- KKAE E AK K KAD E 1501
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 595 LNDHTRKEN K V DE SRSL E NRLR A KNSGQSKN A R t N A EG A IIV EE ESDGEP L QDGQNNQQD EE A K DVNPWLAN E S D EEHTV 674
Cdd:PTZ00121 1502 AKKAAEAKK K A DE AKKA E EAKK A DEAKKAEE A K - K A DE A KKA EE KKKADE L KKAEELKKA EE K K KAEEAKKA E E D KNMAL 1580
410 420 430 440
....*....|....*....|....*....|....*....|....*
6KE6_RQ 675 K K QSSKVNVIDKDSSKNV K AMNKME K AELKQK KK KKGKSNDD E D L 719
Cdd:PTZ00121 1581 R K AEEAKKAEEARIEEVM K LYEEEK K MKAEEA KK AEEAKIKA E E L 1625
Name
Accession
Description
Interval
E-value
COG5644
COG5644 U3 small nucleolar RNA-associated protein 14 [Function unknown];
1-898
0e+00
U3 small nucleolar RNA-associated protein 14 [Function unknown];
Pssm-ID: 227931 [Multi-domain]
Cd Length: 869
Bit Score: 1064.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 1 MAKKKS K SRS K SSRRVLDALQLAER E INGE FD NSSDN D KRHDARRN G tv VN LLKRSKG D TNSDE D DI D SES F E D EEL N SD 80
Cdd:COG5644 1 LPQPQG K HQR K GKKQLENKILHSYE E ESAG FD SEELE D NDEQGYSF G -- VN SEDDEEI D SDEAF D EE D EKR F A D WSF N AS 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 81 EALG S DD D YDI LN SKFSQTIR D KKENA N YQEE E D EG GYT SIDE ED L MP L SQVW D M D EKTAQSN GN D D EDASPQLK L QDTD 160
Cdd:COG5644 79 KSGK S NK D HKN LN NTKEISLN D SDDSV N SDKL E N EG SVS SIDE NE L VD L DTLL D N D QPEKNES GN N D HATDKENL L ESDA 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 161 I SS ES S S SEES E SESE DDEEEE D PF DE I S EDEE D IEL N T I T S KLI DE TKSKAPKRL D TYG S G E ANE Y VLPSA N AA SG A S G 240
Cdd:COG5644 159 S SS ND S E SEES D SESE IESSDS D HD DE N S DSKL D NLR N Y I V S LKK DE ADAESVLSS D DND S I E EIK Y DPHET N KE SG S S E 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 241 KLSL TD MMNV I DDR Q VIENANL L KGK SS TYEV PL PQR IQ Q R HD R K AAYE ISRQEVS KW ND IV QQ NR RA D H LIFP L N KPTE 320
Cdd:COG5644 239 TIDI TD LLDS I PME Q LKVSLKP L VSE SS KLDA PL AKS IQ D R LE R Q AAYE QTKNDLE KW KP IV AD NR KS D Q LIFP M N ETAR 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 321 HNHASAFTRTQDV P Q TE LQE K VD Q V L QESN L A N PEKDS K F EEL STA K MTP EE MRK RT TEM R L MRELMFREERKA R R LK KI 400
Cdd:COG5644 319 PVPSNNGLASSFE P R TE SER K MH Q A L LDAG L E N ESALK K Q EEL ALN K LSV EE VAE RT RQL R F MRELMFREERKA K R VA KI 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 401 KSKTYRKI K K KELM K NRE L AAV S S D ED NE DHDI ARA K ERMT LK HK TN S K W AKD M IKH g MTNDAE TRE EME E ML R Q G ER L K 480
Cdd:COG5644 399 KSKTYRKI R K NRKE K EMA L IPK S E D LE NE KSEE ARA L ERMT QR HK NT S S W TRK M LER - ASHGEG TRE AVN E QI R K G DE L M 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 481 AKMLDRNSD D E ED GRVQTL SD VENE E KENIDS E ALKSKLGKT GV MN M A FM KNGEA R ERE A N K ETLRQ L RA VENGDDI KLF 560
Cdd:COG5644 478 QRIHGKEIM D G ED VSEFSD SD YDTN E QVSTAF E KIRNEEELK GV LG M K FM RDASN R QMA A S K ISVAD L VK VENGDDI DVG 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 561 E S D ee E TN G EN I QI N K GRR IYT P G sles NKDMNE L NDHT RKE NK V DE S R SLE NRLRAKNS GQ S K nart N AEGA IIV E EE s 640
Cdd:COG5644 558 E L D -- E VG G DA I YA N A GRR EVF P V ---- VEQRRK L APRK RKE DF V TP S T SLE KSMDRILH GQ K K ---- R AEGA VVF E KP - 626
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 641 dgeplqdgqnnqq D E EAKDV NPWL ANESDEEHTV KK QSSKVNVI DK DSS K NVKAMNKMEKAE L KQK KK KK G KSN D DEDLL 720
Cdd:COG5644 627 ------------- L E ATENF NPWL DRKMRRIKRI KK KAYRRIRR DK RLK K KMPEEENTQENH L GSE KK RH G GVP D ILLKE 693
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 721 LTAD D STRLK I VD P Y G GSDD E Q G dn VFMFK Q QDVI A E AFAGDDVVAEF Q EEK KRVIDD E DD KE V D TT LPGWGEWAG A G S K 800
Cdd:COG5644 694 IEVE D DEKTP I LS P G G DEEV E E G -- LSIKT Q EELV A L AFAGDDVVAEF E EEK REIVNR E AP KE E D VV LPGWGEWAG P G L K 771
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 801 PKN KK RKFI KKV K G VVNKD KR R D K NL QN VIINEKVNKK NL K YQSSA VPFPFE N REQYERSL RM PIG Q EWT S RASH QE L IK 880
Cdd:COG5644 772 VIK KK SNTV KKV V G GIKYS KR K D F NL SH VIINEKVNKK DK K FLADE VPFPFE T REQYERSL NA PIG R EWT T RASH KR L VR 851
890
....*....|....*...
6KE6_RQ 881 PR IM TK P G Q VI D P L KAP F 898
Cdd:COG5644 852 PR TR TK N G E VI E P F KAP P 869
Utp14
pfam04615 Utp14 protein; This protein is found to be part of a large ribonucleoprotein complex ...
197-897
0e+00
Utp14 protein; This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome.
Pssm-ID: 461368 [Multi-domain]
Cd Length: 704
Bit Score: 638.23
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 197 L NT I TS kl I D ET K S K APKRLD T YGS G EAN E YV L P S anaasga S GKLSL T D MMNVID -- D RQVIENAN LL K -- G KS STYEV 272
Cdd:pfam04615 4 L SF I SG -- L D GK K K K RKLKDR T EEA G QES E FG L T S ------- G GKLSL A D LLLPLV kk D SSLKKSLK LL E ke K KS KKLAA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 273 PLP Q R I Q Q R H DRKAAYE ISRQ E VS KW NDI V QQ NRRA D HL I FPL NK P - T EHNHAS A FTRTQDV P Q TEL QE K VDQV L Q ES N L 351
Cdd:pfam04615 75 PLP K R Q Q D R L DRKAAYE KTKE E LD KW EPT V KR NRRA E HL S FPL QQ P d T VGKSTL A PLASKFK P R TEL EK K IASI L E ES G L 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 352 A NPE K DSK FEEL STA K MTP EE MRK R TT E M R L MRELMFREE R KA R R L KKIKSKTYR K I KK KE LM K N -------- R E L A AVS 423
Cdd:pfam04615 155 A EEK K LAT FEEL ALN K LSV EE VKE R RA E L R K MRELMFREE A KA K R I KKIKSKTYR R I HR KE RE K E aekeeeal A E A A LED 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 424 SD E DN E DHDIA RA K ERMTLKHK TN SKWAK D M I K H G MTN - D A ETR EEME E M LR Q GE R L KA K MLDRNSD D EE D GRVQTL SD V 502
Cdd:pfam04615 235 DE E ER E KQERK RA E ERMTLKHK NT SKWAK S M K K R G RAA w D E ETR AALA E Q LR R GE E L RR K IEGKDVS D DD D DSDDDS SD S 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 503 E N E E --------------- KE NIDSEALKSKLGKT G VMN M A FMK NG EAR ER E A N K E TLRQ LR aveng DDIKLFESDEEET 567
Cdd:pfam04615 315 E D E D dndaklvkrkklgkl KE LEEKAEEEEEGPES G LLS M K FMK RA EAR RK E E N D E EIEE LR ----- RELEQGDEEDGDE 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 568 NG E NI Q I N K GRR IYT PG SLESN ------ K DMNELNDHT R K E NKV D E S RS LE N R LRA K NSGQ S KNARTNA egaiiveeesd 641
Cdd:pfam04615 390 EE E EE Q G N V GRR VFG PG AKVKS lkskkk K SDSKVDSSK R E E FEE D K S KD LE D R AKK K KAKK S SKESKKL ----------- 458
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 642 geplq DGQNNQQD E EAKDV NPWL anes DE EH T V KK Q SSKV N V - I DK D SSK NV K AM NK ME K AEL K QKK KKK GKSN D --- D E 717
Cdd:pfam04615 459 ----- ASEAASEE E ADDES NPWL ---- DE SK T A KK T SSKV E V f V DK S SSK AT K SK NK IK K SKK K NSS KKK SSKD D ali D I 529
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 718 DL LL T AD D ST rlkiv D PYGGSDD E QG D NVFM FKQ Q D V IA E AFAGDDVVAEF QE EKKRVI DD ED D KE V D T TLPGWG E WAG A 797
Cdd:pfam04615 530 DL SN T LK D ES ----- D DDDDDEE E EV D LPVA FKQ R D L IA R AFAGDDVVAEF EK EKKRVI EE ED P KE I D N TLPGWG S WAG D 604
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 798 G S K PKN KK RKFIK K VKGV V N K D KR R D KN L Q NVIINEK VN KKN L KY QS S AV PFPFE NR EQYERSLRMPIG Q EW TSRASH Q E 877
Cdd:pfam04615 605 G V K KRE KK KRKFL K KVEG V K K K KR K D AK L K NVIINEK RD KKN A KY LA S QL PFPFE SK EQYERSLRMPIG P EW NTKETF Q K 684
730 740
....*....|....*....|
6KE6_RQ 878 L I KPR IM TK P G QV I D PLK A P 897
Cdd:pfam04615 685 L T KPR VV TK Q G VI I K PLK K P 704
PTZ00121
PTZ00121 MAEBL; Provisional
276-719
1.53e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 48.98
E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 276 QRIQQRH D R K A A YEISRQ E VS K WND iv QQNRR A DHL - IFPLNKPT E HNHASA F T R T Q DVPQT E LQE K V D QVLQESNLANP 354
Cdd:PTZ00121 1215 EEARKAE D A K K A EAVKKA E EA K KDA -- EEAKK A EEE r NNEEIRKF E EARMAH F A R R Q AAIKA E EAR K A D ELKKAEEKKKA 1292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 355 EKDS K F EE LST A kmtp E E MR K RTT E MRLMR E LMFRE E RKARRLKKI K S K TYRKI K KK E LM K NREL AA vs S DE DNEDHDI A 434
Cdd:PTZ00121 1293 DEAK K A EE KKK A ---- D E AK K KAE E AKKAD E AKKKA E EAKKKADAA K K K AEEAK K AA E AA K AEAE AA -- A DE AEAAEEK A 1366
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 435 R A K E RMTLKH K TNSKW AK dmikhgmt ND AE TREEME E MLRQG E RL K A K MLDRNSDDEEDGRVQTLSDVEN E E K E nid SEA 514
Cdd:PTZ00121 1367 E A A E KKKEEA K KKADA AK -------- KK AE EKKKAD E AKKKA E ED K K K ADELKKAAAAKKKADEAKKKAE E K K K --- ADE 1435
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 515 L K S K LGKTGVMNM A FM K NG EA RER E AN K ETLRQLRAVE ngddi KLFESD EE ETNGENIQ inkgrriyt PGSL E SN K DMN E 594
Cdd:PTZ00121 1436 A K K K AEEAKKADE A KK K AE EA KKA E EA K KKAEEAKKAD ----- EAKKKA EE AKKADEAK --------- KKAE E AK K KAD E 1501
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 595 LNDHTRKEN K V DE SRSL E NRLR A KNSGQSKN A R t N A EG A IIV EE ESDGEP L QDGQNNQQD EE A K DVNPWLAN E S D EEHTV 674
Cdd:PTZ00121 1502 AKKAAEAKK K A DE AKKA E EAKK A DEAKKAEE A K - K A DE A KKA EE KKKADE L KKAEELKKA EE K K KAEEAKKA E E D KNMAL 1580
410 420 430 440
....*....|....*....|....*....|....*....|....*
6KE6_RQ 675 K K QSSKVNVIDKDSSKNV K AMNKME K AELKQK KK KKGKSNDD E D L 719
Cdd:PTZ00121 1581 R K AEEAKKAEEARIEEVM K LYEEEK K MKAEEA KK AEEAKIKA E E L 1625
PTZ00121
PTZ00121 MAEBL; Provisional
317-631
7.32e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 46.67
E-value: 7.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 317 K PT E HNHAS A FTRTQDVPQT E l QEKVDQ V LQESNLANPE K DSKFEELST AK MTP EE MR K RTT E MRLMRE L MFR E ERKARR 396
Cdd:PTZ00121 1570 K KA E EDKNM A LRKAEEAKKA E - EARIEE V MKLYEEEKKM K AEEAKKAEE AK IKA EE LK K AEE E KKKVEQ L KKK E AEEKKK 1648
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 397 LKKI - K SKTYR KIK KK E LM K NR E LAAVSSD E DNEDHDIARAKERMTL K HKTNS K W A KDMI K hgmt ND AE TREEM EE MLRQ 475
Cdd:PTZ00121 1649 AEEL k K AEEEN KIK AA E EA K KA E EDKKKAE E AKKAEEDEKKAAEALK K EAEEA K K A EELK K ---- KE AE EKKKA EE LKKA 1724
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 476 G E RL K A K MLDRNSDD EED GRVQTLSDVEN EEK EN I ------- DSE A LKSKLG K TG V MNMAFMKNG E A R ER E AN K ET lrql 548
Cdd:PTZ00121 1725 E E EN K I K AEEAKKEA EED KKKAEEAKKDE EEK KK I ahlkkee EKK A EEIRKE K EA V IEEELDEED E K R RM E VD K KI ---- 1800
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 549 raven G D DIKL F ESDE E ETNGE N IQ IN KGRRIYTPGSL E SNKDM N elndhtrke NKVD E SRSL E NRLRA KN SGQSKNART 628
Cdd:PTZ00121 1801 ----- K D IFDN F ANII E GGKEG N LV IN DSKEMEDSAIK E VADSK N --------- MQLE E ADAF E KHKFN KN NENGEDGNK 1866
...
6KE6_RQ 629 N A E 631
Cdd:PTZ00121 1867 E A D 1869
PTZ00121
PTZ00121 MAEBL; Provisional
284-697
3.08e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 44.75
E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 284 R KAA YEISRQEVS K wnd IVQQNRR AD HL ifpl N K PT E HNH A SAFTRTQDVPQTELQE K VDQVLQESNLANP E KDS K F EE L 363
Cdd:PTZ00121 1503 K KAA EAKKKADEA K --- KAEEAKK AD EA ---- K K AE E AKK A DEAKKAEEKKKADELK K AEELKKAEEKKKA E EAK K A EE D 1575
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 364 STAKMTPE E MR K RTT E M R LMRELMFR EE R K ARRLKKI K SKTYR KIK KK EL M K NR E LAAVSSDEDNEDHDIARAK E RMTLK 443
Cdd:PTZ00121 1576 KNMALRKA E EA K KAE E A R IEEVMKLY EE E K KMKAEEA K KAEEA KIK AE EL K K AE E EKKKVEQLKKKEAEEKKKA E ELKKA 1655
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 444 HKT N SKW A KDMI K hgmt NDA E TREEM EE MLRQG E RL K AKMLDRNSDD EE DGRVQT L SDV E N EEK EN id S E A LK sklgktg 523
Cdd:PTZ00121 1656 EEE N KIK A AEEA K ---- KAE E DKKKA EE AKKAE E DE K KAAEALKKEA EE AKKAEE L KKK E A EEK KK -- A E E LK ------- 1722
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 524 vmnmafmkngea RER E A NK ETLRQLRAVENG D DI K LF E SDEE E tn G E NIQ I NKGRRIYTPGSL E SN K DMNELNDHTRK E N 603
Cdd:PTZ00121 1723 ------------ KAE E E NK IKAEEAKKEAEE D KK K AE E AKKD E -- E E KKK I AHLKKEEEKKAE E IR K EKEAVIEEELD E E 1788
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 604 kv DE S R SL E NRLRA K N sgqsknar TNAEG A I I V E EESD G EPLQDGQNNQQ D EEA K D V NPWLANESD E EHTVK K QSSKV N V 683
Cdd:PTZ00121 1789 -- DE K R RM E VDKKI K D -------- IFDNF A N I I E GGKE G NLVINDSKEME D SAI K E V ADSKNMQLE E ADAFE K HKFNK N N 1858
410
....*....|....
6KE6_RQ 684 IDKDSSKNVKAM NK 697
Cdd:PTZ00121 1859 ENGEDGNKEADF NK 1872
PTZ00121
PTZ00121 MAEBL; Provisional
337-680
1.77e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 337 ELQE K VDQVLQESNL A NP E KDSKFE E LST A KMTP E EMR K RTT E MRLMRELMFREERKARRLKKI K S K TYRKI KK KELM K N 416
Cdd:PTZ00121 1333 AAKK K AEEAKKAAEA A KA E AEAAAD E AEA A EEKA E AAE K KKE E AKKKADAAKKKAEEKKKADEA K K K AEEDK KK ADEL K K 1412
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 417 REL A AVSS DE DNEDHDIARAKERMTL K HKTNS K WAKDMI K HGMTND AE TREEME E MLRQGERL K A K MLDRNSD DE EDGRV 496
Cdd:PTZ00121 1413 AAA A KKKA DE AKKKAEEKKKADEAKK K AEEAK K ADEAKK K AEEAKK AE EAKKKA E EAKKADEA K K K AEEAKKA DE AKKKA 1492
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 497 QTLSDVEN E E K ENIDSEALKSKLG K TGVMN mafm K NG EA RER E AN K -- ETLRQLRAVENG D DI K LF E S --- D EE ETNG E N 571
Cdd:PTZ00121 1493 EEAKKKAD E A K KAAEAKKKADEAK K AEEAK ---- K AD EA KKA E EA K ka DEAKKAEEKKKA D EL K KA E E lkk A EE KKKA E E 1568
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6KE6_RQ 572 IQINKGRRIYTPGSL E SN K DMN E lndht RKENK V DESRSL E NRLR A KNSGQSKN A RTN AE GAIIV EEE SDGEPLQDGQNN 651
Cdd:PTZ00121 1569 AKKAEEDKNMALRKA E EA K KAE E ----- ARIEE V MKLYEE E KKMK A EEAKKAEE A KIK AE ELKKA EEE KKKVEQLKKKEA 1643
330 340
....*....|....*....|....*....
6KE6_RQ 652 QQDEE A KDV npwla NESD EE HTV K KQSSK 680
Cdd:PTZ00121 1644 EEKKK A EEL ----- KKAE EE NKI K AAEEA 1667
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
