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Conserved domains on  [gi|1975121214|pdb|7LAP|A]
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Chain A, Aminoglycoside N(3)-acetyltransferase

Protein Classification

aminoglycoside N(3)-acetyltransferase( domain architecture ID 10006584)

aminoglycoside N(3)-acetyltransferase catalyzes the conversion of acetyl-CoA and a 2-deoxystreptamine antibiotic to CoA and N(3)-acetyl-2-deoxystreptamine antibiotic

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YokD COG2746
Aminoglycoside N3'-acetyltransferase [Defense mechanisms];
21-287 1.89e-114

Aminoglycoside N3'-acetyltransferase [Defense mechanisms];


:

Pssm-ID: 442043  Cd Length: 256  Bit Score: 330.24  E-value: 1.89e-114
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A       21 PVTRDRIRHDLAALGLVPGDTVMFHTRLSAIGYVSGGPQTVIDALLDVVGPTGTLLVTCGWNDAPpYDFTDWPP----AW 96
Cdd:COG2746   1 PVTRESLAADLRALGVRPGDTVLVHSSLSSLGWVCGGAQAVIEALLDVVGPEGTLVMPTQSGDNS-DPATWENPpvpeEW 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A       97 QEAVRAHHPAFDPRTSEAeHANGRLPEALRRRPGAVRSRHPDVSLAALGASAPALMDAHPWDDPHGPGSPLARLVALGGR 176
Cdd:COG2746  80 WETIRAEMPAFDPATTPT-RGMGAIPETFRTWPGVVRSDHPQASFAAWGPDAEEITADHPLDYGLGEGSPLARLYELDGK 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A      177 VLLLGAPRDTMTLLHHAEALAQAPGKRFVTYEQPIEVAGERVWRTFRDIDSEHgafdyssavpegqDPFAVIVGSMLAAG 256
Cdd:COG2746 159 VLLLGVGYDTNTSLHLAEYRADAPGKRTVRYGAPILEDGERVWVEFEDIDTDS-------------DDFEEIGEAFEAEG 225
                       250       260       270
                ....*....|....*....|....*....|.
7LAP_A      257 IGREGFVGAARSRLFDAAPAVEFGVRWIEEH 287
Cdd:COG2746 226 IVRKGKVGNADSRLFDARDLVDFAVDWLEEH 256
 
Name Accession Description Interval E-value
YokD COG2746
Aminoglycoside N3'-acetyltransferase [Defense mechanisms];
21-287 1.89e-114

Aminoglycoside N3'-acetyltransferase [Defense mechanisms];


Pssm-ID: 442043  Cd Length: 256  Bit Score: 330.24  E-value: 1.89e-114
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A       21 PVTRDRIRHDLAALGLVPGDTVMFHTRLSAIGYVSGGPQTVIDALLDVVGPTGTLLVTCGWNDAPpYDFTDWPP----AW 96
Cdd:COG2746   1 PVTRESLAADLRALGVRPGDTVLVHSSLSSLGWVCGGAQAVIEALLDVVGPEGTLVMPTQSGDNS-DPATWENPpvpeEW 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A       97 QEAVRAHHPAFDPRTSEAeHANGRLPEALRRRPGAVRSRHPDVSLAALGASAPALMDAHPWDDPHGPGSPLARLVALGGR 176
Cdd:COG2746  80 WETIRAEMPAFDPATTPT-RGMGAIPETFRTWPGVVRSDHPQASFAAWGPDAEEITADHPLDYGLGEGSPLARLYELDGK 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A      177 VLLLGAPRDTMTLLHHAEALAQAPGKRFVTYEQPIEVAGERVWRTFRDIDSEHgafdyssavpegqDPFAVIVGSMLAAG 256
Cdd:COG2746 159 VLLLGVGYDTNTSLHLAEYRADAPGKRTVRYGAPILEDGERVWVEFEDIDTDS-------------DDFEEIGEAFEAEG 225
                       250       260       270
                ....*....|....*....|....*....|.
7LAP_A      257 IGREGFVGAARSRLFDAAPAVEFGVRWIEEH 287
Cdd:COG2746 226 IVRKGKVGNADSRLFDARDLVDFAVDWLEEH 256
Antibiotic_NAT pfam02522
Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside ...
43-285 1.52e-86

Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.


Pssm-ID: 426815  Cd Length: 232  Bit Score: 258.31  E-value: 1.52e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A         43 MFHTRLSAIGYVSGGPQTVIDALLDVVGPTGTLLVTCGWN--DAPPYDFTDWPPAWQEAVRAHHPAFDPRTSEAeHANGR 120
Cdd:pfam02522   1 LVHSSLSSLGWVEGGAETVIDALLDALGPEGTLVMPTHTGdsDPAPWENPPVPEEWWDTIREEMPAFDPARTPS-RGMGI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A        121 LPEALRRRPGAVRSRHPDVSLAALGASAPALMDAHPWDDPHGPGSPLARLVALGGRVLLLGAPRDTMTLLHHAEALAQAP 200
Cdd:pfam02522  80 LAETFRTWPGVVRSAHPTHSFAAWGPDAEEITAGHPLDTPLGEGSPLGRLYDLDGKVLLLGVGFDRNTSLHLAEYRADIP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A        201 GKRFVTYEQP-IEVAGERVWRTFRDIDSehgafdyssavpeGQDPFAVIVGSMLAAGIGREGFVGAARSRLFDAAPAVEF 279
Cdd:pfam02522 160 GRRYVRPGAPvIVPDGKRVWVHYEDVDL-------------DSEDFEKLGAAFEREGVMREGKVGNATARLFSARELVDF 226

                  ....*.
7LAP_A        280 GVRWIE 285
Cdd:pfam02522 227 AVEWLE 232
 
Name Accession Description Interval E-value
YokD COG2746
Aminoglycoside N3'-acetyltransferase [Defense mechanisms];
21-287 1.89e-114

Aminoglycoside N3'-acetyltransferase [Defense mechanisms];


Pssm-ID: 442043  Cd Length: 256  Bit Score: 330.24  E-value: 1.89e-114
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A       21 PVTRDRIRHDLAALGLVPGDTVMFHTRLSAIGYVSGGPQTVIDALLDVVGPTGTLLVTCGWNDAPpYDFTDWPP----AW 96
Cdd:COG2746   1 PVTRESLAADLRALGVRPGDTVLVHSSLSSLGWVCGGAQAVIEALLDVVGPEGTLVMPTQSGDNS-DPATWENPpvpeEW 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A       97 QEAVRAHHPAFDPRTSEAeHANGRLPEALRRRPGAVRSRHPDVSLAALGASAPALMDAHPWDDPHGPGSPLARLVALGGR 176
Cdd:COG2746  80 WETIRAEMPAFDPATTPT-RGMGAIPETFRTWPGVVRSDHPQASFAAWGPDAEEITADHPLDYGLGEGSPLARLYELDGK 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A      177 VLLLGAPRDTMTLLHHAEALAQAPGKRFVTYEQPIEVAGERVWRTFRDIDSEHgafdyssavpegqDPFAVIVGSMLAAG 256
Cdd:COG2746 159 VLLLGVGYDTNTSLHLAEYRADAPGKRTVRYGAPILEDGERVWVEFEDIDTDS-------------DDFEEIGEAFEAEG 225
                       250       260       270
                ....*....|....*....|....*....|.
7LAP_A      257 IGREGFVGAARSRLFDAAPAVEFGVRWIEEH 287
Cdd:COG2746 226 IVRKGKVGNADSRLFDARDLVDFAVDWLEEH 256
Antibiotic_NAT pfam02522
Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside ...
43-285 1.52e-86

Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.


Pssm-ID: 426815  Cd Length: 232  Bit Score: 258.31  E-value: 1.52e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A         43 MFHTRLSAIGYVSGGPQTVIDALLDVVGPTGTLLVTCGWN--DAPPYDFTDWPPAWQEAVRAHHPAFDPRTSEAeHANGR 120
Cdd:pfam02522   1 LVHSSLSSLGWVEGGAETVIDALLDALGPEGTLVMPTHTGdsDPAPWENPPVPEEWWDTIREEMPAFDPARTPS-RGMGI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A        121 LPEALRRRPGAVRSRHPDVSLAALGASAPALMDAHPWDDPHGPGSPLARLVALGGRVLLLGAPRDTMTLLHHAEALAQAP 200
Cdd:pfam02522  80 LAETFRTWPGVVRSAHPTHSFAAWGPDAEEITAGHPLDTPLGEGSPLGRLYDLDGKVLLLGVGFDRNTSLHLAEYRADIP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7LAP_A        201 GKRFVTYEQP-IEVAGERVWRTFRDIDSehgafdyssavpeGQDPFAVIVGSMLAAGIGREGFVGAARSRLFDAAPAVEF 279
Cdd:pfam02522 160 GRRYVRPGAPvIVPDGKRVWVHYEDVDL-------------DSEDFEKLGAAFEREGVMREGKVGNATARLFSARELVDF 226

                  ....*.
7LAP_A        280 GVRWIE 285
Cdd:pfam02522 227 AVEWLE 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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