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Conserved domains on  [gi|2203519039|sp|A0A0C2W6G2|]
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RecName: Full=AMP-binding domain-containing enzyme iboA; AltName: Full=Ibotenic acid biosynthesis cluster protein A

Protein Classification

class I adenylate-forming enzyme family protein( domain architecture ID 11416945)

class I adenylate-forming enzyme family protein such as an acyl-CoA synthetase/ligase or amide bond synthetase

EC:  6.-.-.-
Gene Ontology:  GO:0005524|GO:0016874

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AMP-binding super family cl47557
AMP-binding enzyme;
39-426 4.38e-20

AMP-binding enzyme;


The actual alignment was detected with superfamily member pfam00501:

Pssm-ID: 459834 [Multi-domain]  Cd Length: 417  Bit Score: 92.38  E-value: 4.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  39 EWNHITVAEFAAEVDRVAIFvmteLKARGIPPRSAVtVLYSGSRYQDLIYAIALARASYIPQMCPHILTHPGVIFALmEK 118
Cdd:pfam00501  18 EGRRLTYRELDERANRLAAG----LRALGVGKGDRV-AILLPNSPEWVVAFLACLKAGAVYVPLNPRLPAEELAYIL-ED 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 119 AGSKIILYD-----PSLEPATTDCPYPKM-----ALNPIETIDSSSTINSDSALPTIEDLSSGHaDVCFFYLTSGSTsGS 188
Cdd:pfam00501  92 SGAKVLITDdalklEELLEALGKLEVVKLvlvldRDPVLKEEPLPEEAKPADVPPPPPPPPDPD-DLAYIIYTSGTT-GK 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 189 PKVVPLTQKFVSTYYKTQFGIWLDGRRFDTQNAFLSRGS---ICAVAPIIqyFGCLYTGSCIVQPSKM-RFSTEELLTLV 264
Cdd:pfam00501 170 PKGVMLTHRNLVANVLSIKRVRPRGFGLGPDDRVLSTLPlfhDFGLSLGL--LGPLLAGATVVLPPGFpALDPAALLELI 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 265 NVcglNRMTTFgtWLAP--HIQAAKKDPAALKLLQEMRTVSYGGVPISIADDDWCFQ-NGIPLMDMYATTECGTLMVSAP 341
Cdd:pfam00501 248 ER---YKVTVL--YGVPtlLNMLLEAGAPKRALLSSLRLVLSGGAPLPPELARRFRElFGGALVNGYGLTETTGVVTTPL 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 342 GKPARFM------QPVPGISYR-FDPFTDTTTGADNPAStqllkliLLADSPQI-----PQPQL----LSEDGNFHTGDL 405
Cdd:pfam00501 323 PLDEDLRslgsvgRPLPGTEVKiVDDETGEPVPPGEPGE-------LCVRGPGVmkgylNDPELtaeaFDEDGWYRTGDL 395
                         410       420
                  ....*....|....*....|.
gi 2203519039 406 FEKQLDGSYLFRGRGDDWIKS 426
Cdd:pfam00501 396 GRRDEDGYLEIVGRKKDQIKL 416
 
Name Accession Description Interval E-value
AMP-binding pfam00501
AMP-binding enzyme;
39-426 4.38e-20

AMP-binding enzyme;


Pssm-ID: 459834 [Multi-domain]  Cd Length: 417  Bit Score: 92.38  E-value: 4.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  39 EWNHITVAEFAAEVDRVAIFvmteLKARGIPPRSAVtVLYSGSRYQDLIYAIALARASYIPQMCPHILTHPGVIFALmEK 118
Cdd:pfam00501  18 EGRRLTYRELDERANRLAAG----LRALGVGKGDRV-AILLPNSPEWVVAFLACLKAGAVYVPLNPRLPAEELAYIL-ED 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 119 AGSKIILYD-----PSLEPATTDCPYPKM-----ALNPIETIDSSSTINSDSALPTIEDLSSGHaDVCFFYLTSGSTsGS 188
Cdd:pfam00501  92 SGAKVLITDdalklEELLEALGKLEVVKLvlvldRDPVLKEEPLPEEAKPADVPPPPPPPPDPD-DLAYIIYTSGTT-GK 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 189 PKVVPLTQKFVSTYYKTQFGIWLDGRRFDTQNAFLSRGS---ICAVAPIIqyFGCLYTGSCIVQPSKM-RFSTEELLTLV 264
Cdd:pfam00501 170 PKGVMLTHRNLVANVLSIKRVRPRGFGLGPDDRVLSTLPlfhDFGLSLGL--LGPLLAGATVVLPPGFpALDPAALLELI 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 265 NVcglNRMTTFgtWLAP--HIQAAKKDPAALKLLQEMRTVSYGGVPISIADDDWCFQ-NGIPLMDMYATTECGTLMVSAP 341
Cdd:pfam00501 248 ER---YKVTVL--YGVPtlLNMLLEAGAPKRALLSSLRLVLSGGAPLPPELARRFRElFGGALVNGYGLTETTGVVTTPL 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 342 GKPARFM------QPVPGISYR-FDPFTDTTTGADNPAStqllkliLLADSPQI-----PQPQL----LSEDGNFHTGDL 405
Cdd:pfam00501 323 PLDEDLRslgsvgRPLPGTEVKiVDDETGEPVPPGEPGE-------LCVRGPGVmkgylNDPELtaeaFDEDGWYRTGDL 395
                         410       420
                  ....*....|....*....|.
gi 2203519039 406 FEKQLDGSYLFRGRGDDWIKS 426
Cdd:pfam00501 396 GRRDEDGYLEIVGRKKDQIKL 416
AFD_class_I cd04433
Adenylate forming domain, Class I, also known as the ANL superfamily; This family is known as ...
174-519 4.83e-18

Adenylate forming domain, Class I, also known as the ANL superfamily; This family is known as the ANL (acyl-CoA synthetases, the NRPS adenylation domains, and the Luciferase enzymes) superfamily. It includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases.The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain.


Pssm-ID: 341228 [Multi-domain]  Cd Length: 336  Bit Score: 85.41  E-value: 4.83e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 174 DVCFFYLTSGSTsGSPKVVPLTQK-FVSTYYktqfgIWLDGRRFDTQNAFLSRGSICAVAPIIQYFGCLYTGSCIVQPSK 252
Cdd:cd04433     1 DPALILYTSGTT-GKPKGVVLSHRnLLAAAA-----ALAASGGLTEGDVFLSTLPLFHIGGLFGLLGALLAGGTVVLLPK 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 253 mrFSTEELLTLVNvcgLNRMTTFGTW------LAPHIQAAKKDPAALkllqemRTVSYGGVPISIADDDWcFQN--GIPL 324
Cdd:cd04433    75 --FDPEAALELIE---REKVTILLGVptllarLLKAPESAGYDLSSL------RALVSGGAPLPPELLER-FEEapGIKL 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 325 MDMYATTECGTLMVSAPG-----KPARFMQPVPGISYR-FDPftDTTTGADNPASTQLLKlilladSPQIPQ-------- 390
Cdd:cd04433   143 VNGYGLTETGGTVATGPPdddarKPGSVGRPVPGVEVRiVDP--DGGELPPGEIGELVVR------GPSVMKgywnnpea 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 391 PQLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKS--------EdsrfidtkaIEEKINDVcsDLVKGCIVVGH----L 458
Cdd:cd04433   215 TAAVDEDGWYRTGDLGRLDEDGYLYIVGRLKDMIKSggenvypaE---------VEAVLLGH--PGVAEAAVVGVpdpeW 283
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2203519039 459 RPSPALFIEAyhDSISTISEDGLKELVLRRLEDFnarqlkheRITDKrlIFIVDEgnLPRT 519
Cdd:cd04433   284 GERVVAVVVL--RPGADLDAEELRAHVRERLAPY--------KVPRR--VVFVDA--LPRT 330
MenE/FadK COG0318
O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid ...
39-519 1.85e-17

O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]; O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440087 [Multi-domain]  Cd Length: 452  Bit Score: 84.86  E-value: 1.85e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  39 EWNHITVAEFAAEVDRVAifvmTELKARGIPPRSAVTVLY-SGSRYQDLIYAIALARASYIPqmCPHILTHPGVIFALmE 117
Cdd:COG0318    21 GGRRLTYAELDARARRLA----AALRALGVGPGDRVALLLpNSPEFVVAFLAALRAGAVVVP--LNPRLTAEELAYIL-E 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 118 KAGSKIILYdpslepattdcpypkmalnpietidssstinsdsalptiedlssghADVCFfylTSGSTsGSPKVVPLTQK 197
Cdd:COG0318    94 DSGARALVT----------------------------------------------ALILY---TSGTT-GRPKGVMLTHR 123
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 198 FVSTYYkTQFGIWLDGRRFDTqnaflsrgsICAVAP-------IIQYFGCLYTGSCIVQPSkmRFSTEELLTLVNVCGLN 270
Cdd:COG0318   124 NLLANA-AAIAAALGLTPGDV---------VLVALPlfhvfglTVGLLAPLLAGATLVLLP--RFDPERVLELIERERVT 191
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 271 RMT---TFGTWLAPHIQAAKKDPAALkllqemRTVSYGGVPISIAD-DDWCFQNGIPLMDMYATTECGTLMVSAPGKPAR 346
Cdd:COG0318   192 VLFgvpTMLARLLRHPEFARYDLSSL------RLVVSGGAPLPPELlERFEERFGVRIVEGYGLTETSPVVTVNPEDPGE 265
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 347 FM-----QPVPGISYR-FDPftdttTGADNPASTQLLkliLLADSPQIPQ-----PQLLSE---DGNFHTGDLFEKQLDG 412
Cdd:COG0318   266 RRpgsvgRPLPGVEVRiVDE-----DGRELPPGEVGE---IVVRGPNVMKgywndPEATAEafrDGWLRTGDLGRLDEDG 337
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 413 SYLFRGRGDDWIKSEDSRfIDTKAIEEKINDVcsDLVKGCIVVGhlRPSP------ALFIEAYHDsiSTISEDGLKELVL 486
Cdd:COG0318   338 YLYIVGRKKDMIISGGEN-VYPAEVEEVLAAH--PGVAEAAVVG--VPDEkwgervVAFVVLRPG--AELDAEELRAFLR 410
                         490       500       510
                  ....*....|....*....|....*....|...
gi 2203519039 487 RRLEdfnarqlKHERItdkRLIFIVDEgnLPRT 519
Cdd:COG0318   411 ERLA-------RYKVP---RRVEFVDE--LPRT 431
PRK05857 PRK05857
fatty acid--CoA ligase;
47-426 3.90e-08

fatty acid--CoA ligase;


Pssm-ID: 180293 [Multi-domain]  Cd Length: 540  Bit Score: 55.78  E-value: 3.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  47 EFAAEVDRVAifvmTELKARGIPPRSAVTVLySGSRYQDLIYAIALARASYIPQMCPHILThPGVIFALMEKAGSKIILY 126
Cdd:PRK05857   46 ELVAEVGGLA----ADLRAQSVSRGSRVLVI-SDNGPETYLSVLACAKLGAIAVMADGNLP-IAAIERFCQITDPAAALV 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 127 DPSLEPATTDCPYPKMALNPIETIDSSSTI----NSDSALPTIEdLSSGHADVCFFYLTSGSTsGSPKVVPLTQKfvsty 202
Cdd:PRK05857  120 APGSKMASSAVPEALHSIPVIAVDIAAVTResehSLDAASLAGN-ADQGSEDPLAMIFTSGTT-GEPKAVLLANR----- 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 203 ykTQFGI----------WLDGRRFDTQNAFLSRGSICAVAPIIQyfGCLYTGSCIVqpskmrfSTEELLTLVNVCGLNRM 272
Cdd:PRK05857  193 --TFFAVpdilqkeglnWVTWVVGETTYSPLPATHIGGLWWILT--CLMHGGLCVT-------GGENTTSLLEILTTNAV 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 273 TTfgTWLAPHIQAakKDPAALKL----LQEMRTVSYGGVPISIADDDWCFQNGIPLMDMYATTECGTLMVSAP---GKPA 345
Cdd:PRK05857  262 AT--TCLVPTLLS--KLVSELKSanatVPSLRLVGYGGSRAIAADVRFIEATGVRTAQVYGLSETGCTALCLPtddGSIV 337
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 346 RFMQ-----PVPGIS-YRFDPFTDTTTGADNPASTQLLKLILLA--------DSPQIPQPQLLseDGNFHTGDLFEKQLD 411
Cdd:PRK05857  338 KIEAgavgrPYPGVDvYLAATDGIGPTAPGAGPSASFGTLWIKSpanmlgywNNPERTAEVLI--DGWVNTGDLLERRED 415
                         410
                  ....*....|....*
gi 2203519039 412 GSYLFRGRGDDWIKS 426
Cdd:PRK05857  416 GFFYIKGRSSEMIIC 430
 
Name Accession Description Interval E-value
AMP-binding pfam00501
AMP-binding enzyme;
39-426 4.38e-20

AMP-binding enzyme;


Pssm-ID: 459834 [Multi-domain]  Cd Length: 417  Bit Score: 92.38  E-value: 4.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  39 EWNHITVAEFAAEVDRVAIFvmteLKARGIPPRSAVtVLYSGSRYQDLIYAIALARASYIPQMCPHILTHPGVIFALmEK 118
Cdd:pfam00501  18 EGRRLTYRELDERANRLAAG----LRALGVGKGDRV-AILLPNSPEWVVAFLACLKAGAVYVPLNPRLPAEELAYIL-ED 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 119 AGSKIILYD-----PSLEPATTDCPYPKM-----ALNPIETIDSSSTINSDSALPTIEDLSSGHaDVCFFYLTSGSTsGS 188
Cdd:pfam00501  92 SGAKVLITDdalklEELLEALGKLEVVKLvlvldRDPVLKEEPLPEEAKPADVPPPPPPPPDPD-DLAYIIYTSGTT-GK 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 189 PKVVPLTQKFVSTYYKTQFGIWLDGRRFDTQNAFLSRGS---ICAVAPIIqyFGCLYTGSCIVQPSKM-RFSTEELLTLV 264
Cdd:pfam00501 170 PKGVMLTHRNLVANVLSIKRVRPRGFGLGPDDRVLSTLPlfhDFGLSLGL--LGPLLAGATVVLPPGFpALDPAALLELI 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 265 NVcglNRMTTFgtWLAP--HIQAAKKDPAALKLLQEMRTVSYGGVPISIADDDWCFQ-NGIPLMDMYATTECGTLMVSAP 341
Cdd:pfam00501 248 ER---YKVTVL--YGVPtlLNMLLEAGAPKRALLSSLRLVLSGGAPLPPELARRFRElFGGALVNGYGLTETTGVVTTPL 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 342 GKPARFM------QPVPGISYR-FDPFTDTTTGADNPAStqllkliLLADSPQI-----PQPQL----LSEDGNFHTGDL 405
Cdd:pfam00501 323 PLDEDLRslgsvgRPLPGTEVKiVDDETGEPVPPGEPGE-------LCVRGPGVmkgylNDPELtaeaFDEDGWYRTGDL 395
                         410       420
                  ....*....|....*....|.
gi 2203519039 406 FEKQLDGSYLFRGRGDDWIKS 426
Cdd:pfam00501 396 GRRDEDGYLEIVGRKKDQIKL 416
AFD_class_I cd04433
Adenylate forming domain, Class I, also known as the ANL superfamily; This family is known as ...
174-519 4.83e-18

Adenylate forming domain, Class I, also known as the ANL superfamily; This family is known as the ANL (acyl-CoA synthetases, the NRPS adenylation domains, and the Luciferase enzymes) superfamily. It includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases.The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain.


Pssm-ID: 341228 [Multi-domain]  Cd Length: 336  Bit Score: 85.41  E-value: 4.83e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 174 DVCFFYLTSGSTsGSPKVVPLTQK-FVSTYYktqfgIWLDGRRFDTQNAFLSRGSICAVAPIIQYFGCLYTGSCIVQPSK 252
Cdd:cd04433     1 DPALILYTSGTT-GKPKGVVLSHRnLLAAAA-----ALAASGGLTEGDVFLSTLPLFHIGGLFGLLGALLAGGTVVLLPK 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 253 mrFSTEELLTLVNvcgLNRMTTFGTW------LAPHIQAAKKDPAALkllqemRTVSYGGVPISIADDDWcFQN--GIPL 324
Cdd:cd04433    75 --FDPEAALELIE---REKVTILLGVptllarLLKAPESAGYDLSSL------RALVSGGAPLPPELLER-FEEapGIKL 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 325 MDMYATTECGTLMVSAPG-----KPARFMQPVPGISYR-FDPftDTTTGADNPASTQLLKlilladSPQIPQ-------- 390
Cdd:cd04433   143 VNGYGLTETGGTVATGPPdddarKPGSVGRPVPGVEVRiVDP--DGGELPPGEIGELVVR------GPSVMKgywnnpea 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 391 PQLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKS--------EdsrfidtkaIEEKINDVcsDLVKGCIVVGH----L 458
Cdd:cd04433   215 TAAVDEDGWYRTGDLGRLDEDGYLYIVGRLKDMIKSggenvypaE---------VEAVLLGH--PGVAEAAVVGVpdpeW 283
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2203519039 459 RPSPALFIEAyhDSISTISEDGLKELVLRRLEDFnarqlkheRITDKrlIFIVDEgnLPRT 519
Cdd:cd04433   284 GERVVAVVVL--RPGADLDAEELRAHVRERLAPY--------KVPRR--VVFVDA--LPRT 330
MenE/FadK COG0318
O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid ...
39-519 1.85e-17

O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]; O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440087 [Multi-domain]  Cd Length: 452  Bit Score: 84.86  E-value: 1.85e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  39 EWNHITVAEFAAEVDRVAifvmTELKARGIPPRSAVTVLY-SGSRYQDLIYAIALARASYIPqmCPHILTHPGVIFALmE 117
Cdd:COG0318    21 GGRRLTYAELDARARRLA----AALRALGVGPGDRVALLLpNSPEFVVAFLAALRAGAVVVP--LNPRLTAEELAYIL-E 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 118 KAGSKIILYdpslepattdcpypkmalnpietidssstinsdsalptiedlssghADVCFfylTSGSTsGSPKVVPLTQK 197
Cdd:COG0318    94 DSGARALVT----------------------------------------------ALILY---TSGTT-GRPKGVMLTHR 123
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 198 FVSTYYkTQFGIWLDGRRFDTqnaflsrgsICAVAP-------IIQYFGCLYTGSCIVQPSkmRFSTEELLTLVNVCGLN 270
Cdd:COG0318   124 NLLANA-AAIAAALGLTPGDV---------VLVALPlfhvfglTVGLLAPLLAGATLVLLP--RFDPERVLELIERERVT 191
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 271 RMT---TFGTWLAPHIQAAKKDPAALkllqemRTVSYGGVPISIAD-DDWCFQNGIPLMDMYATTECGTLMVSAPGKPAR 346
Cdd:COG0318   192 VLFgvpTMLARLLRHPEFARYDLSSL------RLVVSGGAPLPPELlERFEERFGVRIVEGYGLTETSPVVTVNPEDPGE 265
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 347 FM-----QPVPGISYR-FDPftdttTGADNPASTQLLkliLLADSPQIPQ-----PQLLSE---DGNFHTGDLFEKQLDG 412
Cdd:COG0318   266 RRpgsvgRPLPGVEVRiVDE-----DGRELPPGEVGE---IVVRGPNVMKgywndPEATAEafrDGWLRTGDLGRLDEDG 337
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 413 SYLFRGRGDDWIKSEDSRfIDTKAIEEKINDVcsDLVKGCIVVGhlRPSP------ALFIEAYHDsiSTISEDGLKELVL 486
Cdd:COG0318   338 YLYIVGRKKDMIISGGEN-VYPAEVEEVLAAH--PGVAEAAVVG--VPDEkwgervVAFVVLRPG--AELDAEELRAFLR 410
                         490       500       510
                  ....*....|....*....|....*....|...
gi 2203519039 487 RRLEdfnarqlKHERItdkRLIFIVDEgnLPRT 519
Cdd:COG0318   411 ERLA-------RYKVP---RRVEFVDE--LPRT 431
MACS_like cd05972
Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of ...
174-520 2.12e-13

Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes.


Pssm-ID: 341276 [Multi-domain]  Cd Length: 428  Bit Score: 71.98  E-value: 2.12e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 174 DVCFFYLTSGsTSGSPKVVPLTQKFVSTYYKTQfGIWLDGRRFDTQNAFLSRGSI-CAVAPIiqyFGCLYTGSCIVQPSK 252
Cdd:cd05972    82 DPALIYFTSG-TTGLPKGVLHTHSYPLGHIPTA-AYWLGLRPDDIHWNIADPGWAkGAWSSF---FGPWLLGATVFVYEG 156
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 253 MRFSTEELLTLVNVCGLNRMTTfgtwlAPHI--QAAKKDPAALKLLqEMRTVSYGGVP-----ISIADDDWcfqnGIPLM 325
Cdd:cd05972   157 PRFDAERILELLERYGVTSFCG-----PPTAyrMLIKQDLSSYKFS-HLRLVVSAGEPlnpevIEWWRAAT----GLPIR 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 326 DMYATTECG-TLMVS--APGKPARFMQPVPGisYRFDpFTDTTTGADNPASTQLLKLilladspQIPQPQLLSE------ 396
Cdd:cd05972   227 DGYGQTETGlTVGNFpdMPVKPGSMGRPTPG--YDVA-IIDDDGRELPPGEEGDIAI-------KLPPPGLFLGyvgdpe 296
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 397 -------DGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEDSRfIDTKAIEEKIndVCSDLVKGCIVVGHLRPSPALFIEAY 469
Cdd:cd05972   297 kteasirGDYYLTGDRAYRDEDGYFWFVGRADDIIKSSGYR-IGPFEVESAL--LEHPAVAEAAVVGSPDPVRGEVVKAF 373
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2203519039 470 hdSISTISEDGLKELVlRRLEDFNARQL---KHERITDkrlifIVDEgnLPRTV 520
Cdd:cd05972   374 --VVLTSGYEPSEELA-EELQGHVKKVLapyKYPREIE-----FVEE--LPKTI 417
ABCL cd05958
2-aminobenzoate-CoA ligase (ABCL); ABCL catalyzes the initial step in the 2-aminobenzoate ...
174-519 2.29e-11

2-aminobenzoate-CoA ligase (ABCL); ABCL catalyzes the initial step in the 2-aminobenzoate aerobic degradation pathway by activating 2-aminobenzoate to 2-aminobenzoyl-CoA. The reaction is carried out via a two-step process; the first step is ATP-dependent and forms a 2-aminobenzoyl-AMP intermediate, and the second step forms the 2-aminobenzoyl-CoA ester and releases the AMP. 2-Aminobenzoyl-CoA is further converted to 2-amino-5-oxo-cyclohex-1-ene-1-carbonyl-CoA catalyzed by 2-aminobenzoyl-CoA monooxygenase/reductase. ABCL has been purified from cells aerobically grown with 2-aminobenzoate as sole carbon, energy, and nitrogen source, and has been characterized as a monomer.


Pssm-ID: 341268 [Multi-domain]  Cd Length: 439  Bit Score: 65.96  E-value: 2.29e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 174 DVCFFYLTSGSTsGSPKVVPLTQKFVSTYYKTqFGIWLDGRRFDTQnaflsrgsICAVAPIIQYFGC-------LYTG-S 245
Cdd:cd05958    98 DICILAFTSGTT-GAPKATMHFHRDPLASADR-YAVNVLRLREDDR--------FVGSPPLAFTFGLggvllfpFGVGaS 167
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 246 CIVQPskmRFSTEELLTLVnvcGLNRMTTFGTwlAPHIQAA---KKDPAALKLLQEMRTVSYGGVPISIADDDWCFQNGI 322
Cdd:cd05958   168 GVLLE---EATPDLLLSAI---ARYKPTVLFT--APTAYRAmlaHPDAAGPDLSSLRKCVSAGEALPAALHRAWKEATGI 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 323 PLMDMYATTECGTLMVSA-PG--KPARFMQPVPGisYRFDPFTDttTGADNPASTQLLkliLLADSPQI------PQPQL 393
Cdd:cd05958   240 PIIDGIGSTEMFHIFISArPGdaRPGATGKPVPG--YEAKVVDD--EGNPVPDGTIGR---LAVRGPTGcryladKRQRT 312
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 394 LSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEdSRFIDTKAIEEKIndVCSDLVKGCIVVGHLRPSPALFIEAYhdsI 473
Cdd:cd05958   313 YVQGGWNITGDTYSRDPDGYFRHQGRSDDMIVSG-GYNIAPPEVEDVL--LQHPAVAECAVVGHPDESRGVVVKAF---V 386
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 2203519039 474 STISEDGLKELVLRRLEDFNARQL-KHERitdKRLIFIVDEgnLPRT 519
Cdd:cd05958   387 VLRPGVIPGPVLARELQDHAKAHIaPYKY---PRAIEFVTE--LPRT 428
Acs COG0365
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism];
42-519 8.06e-10

Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism];


Pssm-ID: 440134 [Multi-domain]  Cd Length: 565  Bit Score: 61.28  E-value: 8.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  42 HITVAEFAAEVDRVAIFvmteLKARGIP---------PRS--------------AV-TVLYSGSRYQDLIYAIALARASy 97
Cdd:COG0365    39 TLTYAELRREVNRFANA----LRALGVKkgdrvaiylPNIpeaviamlacarigAVhSPVFPGFGAEALADRIEDAEAK- 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  98 ipqmcpHILTHPGVIFalmekaGSKIILYDPSLEPATTDCPYPK---------MALNPIETIDSSSTINSDSALPTIEDL 168
Cdd:COG0365   114 ------VLITADGGLR------GGKVIDLKEKVDEALEELPSLEhvivvgrtgADVPMEGDLDWDELLAAASAEFEPEPT 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 169 SSghADVCFFYLTSGSTsGSPKVVPLTQKFVSTYYKTQFGIWLDGRRFDTqnaflsrgsICAVAPI--------IQYFGc 240
Cdd:COG0365   182 DA--DDPLFILYTSGTT-GKPKGVVHTHGGYLVHAATTAKYVLDLKPGDV---------FWCTADIgwatghsyIVYGP- 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 241 LYTGSCIV-QPSKMRFSTEEllTLVNVCGLNRMTTFGTwlAP---------HIQAAKK-DPAALKLLqemrtVSyGGVPI 309
Cdd:COG0365   249 LLNGATVVlYEGRPDFPDPG--RLWELIEKYGVTVFFT--APtairalmkaGDEPLKKyDLSSLRLL-----GS-AGEPL 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 310 SIADDDWCFQN-GIPLMDMYATTECGTLMVSAPG----KPARFMQPVPGISYR-FDPftdttTGADNPASTQ---LLKLi 380
Cdd:COG0365   319 NPEVWEWWYEAvGVPIVDGWGQTETGGIFISNLPglpvKPGSMGKPVPGYDVAvVDE-----DGNPVPPGEEgelVIKG- 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 381 lladspqiPQPQLLSE----------------DGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEDSRfIDTKAIEEKINDV 444
Cdd:COG0365   393 --------PWPGMFRGywndperyretyfgrfPGWYRTGDGARRDEDGYFWILGRSDDVINVSGHR-IGTAEIESALVSH 463
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 445 csDLVKGCIVVGhlRP------SPALFI---EAYHDSISTISEdgLKELVLRRLEdfnarqlKHERItdkRLIFIVDEgn 515
Cdd:COG0365   464 --PAVAEAAVVG--VPdeirgqVVKAFVvlkPGVEPSDELAKE--LQAHVREELG-------PYAYP---REIEFVDE-- 525

                  ....
gi 2203519039 516 LPRT 519
Cdd:COG0365   526 LPKT 529
LC_FACS_bac cd05932
Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter ...
44-502 9.68e-10

Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase; The members of this family are bacterial long-chain fatty acid CoA synthetase. Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase in this family is involved in the synthesis of isoprenoid wax ester storage compounds when grown on phytol as the sole carbon source. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.


Pssm-ID: 341255 [Multi-domain]  Cd Length: 508  Bit Score: 60.95  E-value: 9.68e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  44 TVAEFAAEVDRVAifvmTELKARGIPPRSAVTVLySGSRYQDLIYAIALARASYI---------PQMCPHILTHpgvifa 114
Cdd:cd05932     8 TWGEVADKARRLA----AALRALGLEPGSKIALI-SKNCAEWFITDLAIWMAGHIsvplyptlnPDTIRYVLEH------ 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 115 lmekAGSKII----LYD-PSLEPATTDCP--YPKMALNPIETIDSSSTINSDSAlPTIEDLSSGHADVCFFYLTSGSTsG 187
Cdd:cd05932    77 ----SESKALfvgkLDDwKAMAPGVPEGLisISLPPPSAANCQYQWDDLIAQHP-PLEERPTRFPEQLATLIYTSGTT-G 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 188 SPKVVPLTqkFVSTYYKTQFGIwldgRRFDT--QNAFLSRGSICAVAPIIQYF-GCLYTGSCIvqpskmrFSTEELLTLV 264
Cdd:cd05932   151 QPKGVMLT--FGSFAWAAQAGI----EHIGTeeNDRMLSYLPLAHVTERVFVEgGSLYGGVLV-------AFAESLDTFV 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 265 NVCGLNRMTTFGT----WLAPHIQAAKKDPAA-----LKL----------------LQEMRTVSYGGVPISIADDDWCFQ 319
Cdd:cd05932   218 EDVQRARPTLFFSvprlWTKFQQGVQDKIPQQklnllLKIpvvnslvkrkvlkglgLDQCRLAGCGSAPVPPALLEWYRS 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 320 NGIPLMDMYATTE-CGTLMVSAPG--KPARFMQPVPGISYRFDPftdttTGAdnpastqllkliLLADSPQI-----PQP 391
Cdd:cd05932   298 LGLNILEAYGMTEnFAYSHLNYPGrdKIGTVGNAGPGVEVRISE-----DGE------------ILVRSPALmmgyyKDP 360
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 392 ----QLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEDSRFIDTKAIEEKIndVCSDLVKGCIVVGHLRPSPALFI- 466
Cdd:cd05932   361 eataEAFTADGFLRTGDKGELDADGNLTITGRVKDIFKTSKGKYVAPAPIENKL--AEHDRVEMVCVIGSGLPAPLALVv 438
                         490       500       510
                  ....*....|....*....|....*....|....*...
gi 2203519039 467 --EAYHDSISTISEDGLKELVLRRLEDFNARQLKHERI 502
Cdd:cd05932   439 lsEEARLRADAFARAELEASLRAHLARVNSTLDSHEQL 476
BCL_like cd05919
Benzoate CoA ligase (BCL) and similar adenylate forming enzymes; This family contains benzoate ...
173-519 1.33e-09

Benzoate CoA ligase (BCL) and similar adenylate forming enzymes; This family contains benzoate CoA ligase (BCL) and related ligases that catalyze the acylation of benzoate derivatives, 2-aminobenzoate and 4-hydroxybenzoate. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Xenobiotic aromatic compounds are also a major class of man-made pollutants. Some bacteria use benzoate as the sole source of carbon and energy through benzoate degradation. Benzoate degradation starts with its activation to benzoyl-CoA by benzoate CoA ligase. The reaction catalyzed by benzoate CoA ligase proceeds via a two-step process; the first ATP-dependent step forms an acyl-AMP intermediate, and the second step forms the acyl-CoA ester with release of the AMP.


Pssm-ID: 341243 [Multi-domain]  Cd Length: 436  Bit Score: 60.17  E-value: 1.33e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 173 ADVCFFYLTSGSTsGSPKVVPLTQK----FVSTYYKTQFGIWLDGRRFDTQNAFLSRGSICAVapiiqyFGCLYTG-SCI 247
Cdd:cd05919    91 DDIAYLLYSSGTT-GPPKGVMHAHRdpllFADAMAREALGLTPGDRVFSSAKMFFGYGLGNSL------WFPLAVGaSAV 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 248 VQPSkmRFSTEELL-TLVNvcglNRMTTFgtWLAPHIQAAKKDPAAL--KLLQEMRTVSYGG--VPISIADDdWCFQNGI 322
Cdd:cd05919   164 LNPG--WPTAERVLaTLAR----FRPTVL--YGVPTFYANLLDSCAGspDALRSLRLCVSAGeaLPRGLGER-WMEHFGG 234
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 323 PLMDMYATTECGTLMVSA-PG--KPARFMQPVPGISYRFDPFTDTTTGADNPAstqllklILLADSPQIP--------QP 391
Cdd:cd05919   235 PILDGIGATEVGHIFLSNrPGawRLGSTGRPVPGYEIRLVDEEGHTIPPGEEG-------DLLVRGPSAAvgywnnpeKS 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 392 QLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKSeDSRFIDTKAIEEKINDVcsDLVKGCIVVGHLRPS----PALFIE 467
Cdd:cd05919   308 RATFNGGWYRTGDKFCRDADGWYTHAGRADDMLKV-GGQWVSPVEVESLIIQH--PAVAEAAVVAVPESTglsrLTAFVV 384
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2203519039 468 AYHDSIStisedglKELVLRRLEDFNARQLK-HERitdKRLIFIVDEgnLPRT 519
Cdd:cd05919   385 LKSPAAP-------QESLARDIHRHLLERLSaHKV---PRRIAFVDE--LPRT 425
PRK05857 PRK05857
fatty acid--CoA ligase;
47-426 3.90e-08

fatty acid--CoA ligase;


Pssm-ID: 180293 [Multi-domain]  Cd Length: 540  Bit Score: 55.78  E-value: 3.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  47 EFAAEVDRVAifvmTELKARGIPPRSAVTVLySGSRYQDLIYAIALARASYIPQMCPHILThPGVIFALMEKAGSKIILY 126
Cdd:PRK05857   46 ELVAEVGGLA----ADLRAQSVSRGSRVLVI-SDNGPETYLSVLACAKLGAIAVMADGNLP-IAAIERFCQITDPAAALV 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 127 DPSLEPATTDCPYPKMALNPIETIDSSSTI----NSDSALPTIEdLSSGHADVCFFYLTSGSTsGSPKVVPLTQKfvsty 202
Cdd:PRK05857  120 APGSKMASSAVPEALHSIPVIAVDIAAVTResehSLDAASLAGN-ADQGSEDPLAMIFTSGTT-GEPKAVLLANR----- 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 203 ykTQFGI----------WLDGRRFDTQNAFLSRGSICAVAPIIQyfGCLYTGSCIVqpskmrfSTEELLTLVNVCGLNRM 272
Cdd:PRK05857  193 --TFFAVpdilqkeglnWVTWVVGETTYSPLPATHIGGLWWILT--CLMHGGLCVT-------GGENTTSLLEILTTNAV 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 273 TTfgTWLAPHIQAakKDPAALKL----LQEMRTVSYGGVPISIADDDWCFQNGIPLMDMYATTECGTLMVSAP---GKPA 345
Cdd:PRK05857  262 AT--TCLVPTLLS--KLVSELKSanatVPSLRLVGYGGSRAIAADVRFIEATGVRTAQVYGLSETGCTALCLPtddGSIV 337
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 346 RFMQ-----PVPGIS-YRFDPFTDTTTGADNPASTQLLKLILLA--------DSPQIPQPQLLseDGNFHTGDLFEKQLD 411
Cdd:PRK05857  338 KIEAgavgrPYPGVDvYLAATDGIGPTAPGAGPSASFGTLWIKSpanmlgywNNPERTAEVLI--DGWVNTGDLLERRED 415
                         410
                  ....*....|....*
gi 2203519039 412 GSYLFRGRGDDWIKS 426
Cdd:PRK05857  416 GFFYIKGRSSEMIIC 430
MACS_like_1 cd05974
Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the ...
81-430 1.06e-07

Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.


Pssm-ID: 341278 [Multi-domain]  Cd Length: 432  Bit Score: 54.11  E-value: 1.06e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  81 SRYQDLIYAIALARASYIPQMCPHILTHPGVIFALMeKAGSKIIlydpslePATTdcpypkmALNPIETIDSsstINSDS 160
Cdd:cd05974    11 SRVANFLRSIGVGRGDRILLMLGNVVELWEAMLAAM-KLGAVVI-------PATT-------LLTPDDLRDR---VDRGG 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 161 ALPTIEDLSSGHADVCFFYLTSGSTSgSPKVVPLTQK-----FVSTYYktqfgiWLDGRRFDTQNAFLSRGsiCAVAPII 235
Cdd:cd05974    73 AVYAAVDENTHADDPMLLYFTSGTTS-KPKLVEHTHRsypvgHLSTMY------WIGLKPGDVHWNISSPG--WAKHAWS 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 236 QYFGCLYTGSCIVQPSKMRFSTEELLTLVNVCGLNRMTTFGTWLAPHIQAakkDPAALKLlqEMRTVSYGGVP-----IS 310
Cdd:cd05974   144 CFFAPWNAGATVFLFNYARFDAKRVLAALVRYGVTTLCAPPTVWRMLIQQ---DLASFDV--KLREVVGAGEPlnpevIE 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 311 IADDDWcfqnGIPLMDMYATTECGTLMVSAPG---KPARFMQPVPGisYR---FDPftdtttgADNPASTQLLKLILLAD 384
Cdd:cd05974   219 QVRRAW----GLTIRDGYGQTETTALVGNSPGqpvKAGSMGRPLPG--YRvalLDP-------DGAPATEGEVALDLGDT 285
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2203519039 385 SP------QIPQPQLLSE---DGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEDSR 430
Cdd:cd05974   286 RPvglmkgYAGDPDKTAHamrGGYYRTGDIAMRDEDGYLTYVGRADDVFKSSDYR 340
Firefly_Luc_like cd05911
Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL); This family ...
104-519 1.34e-07

Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL); This family contains insect firefly luciferases that share significant sequence similarity to plant 4-coumarate:coenzyme A ligases, despite their functional diversity. Luciferase catalyzes the production of light in the presence of MgATP, molecular oxygen, and luciferin. In the first step, luciferin is activated by acylation of its carboxylate group with ATP, resulting in an enzyme-bound luciferyl adenylate. In the second step, luciferyl adenylate reacts with molecular oxygen, producing an enzyme-bound excited state product (Luc=O*) and releasing AMP. This excited-state product then decays to the ground state (Luc=O), emitting a quantum of visible light.


Pssm-ID: 341237 [Multi-domain]  Cd Length: 486  Bit Score: 54.14  E-value: 1.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 104 HILTHPGVIFALMEKA-----GSKIILYDPSLEPATtdcpypkmalnPIETIDSSSTINSDSALPTIEDLssGHADVCFF 178
Cdd:cd05911    85 VIFTDPDGLEKVKEAAkelgpKDKIIVLDDKPDGVL-----------SIEDLLSPTLGEEDEDLPPPLKD--GKDDTAAI 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 179 YLTSGsTSGSPKVVPLTQK-FVSTYYKTQFGIWLDGRRFDTQNAFLSRGSICAVapIIQYFGCLYTGSCIVQPskmRFST 257
Cdd:cd05911   152 LYSSG-TTGLPKGVCLSHRnLIANLSQVQTFLYGNDGSNDVILGFLPLYHIYGL--FTTLASLLNGATVIIMP---KFDS 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 258 EELLTLVNvcglNRMTTFgTWLAPHIQAA-KKDPAALKL-LQEMRTVSYGGVPIS--------IADDDWCFQNGiplmdm 327
Cdd:cd05911   226 ELFLDLIE----KYKITF-LYLVPPIAAAlAKSPLLDKYdLSSLRVILSGGAPLSkelqellaKRFPNATIKQG------ 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 328 YATTECGTLMVSAPGKPARFM---QPVPGISYRF-DPFTDTTTGADNPAstqllklILLADSPQI-------PQP--QLL 394
Cdd:cd05911   295 YGMTETGGILTVNPDGDDKPGsvgRLLPNVEAKIvDDDGKDSLGPNEPG-------EICVRGPQVmkgyynnPEAtkETF 367
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 395 SEDGNFHTGDL--FEKqlDGSYLFRGRGDDWIK--------SEdsrfidtkaIEE------KINDVC---------SDLV 449
Cdd:cd05911   368 DEDGWLHTGDIgyFDE--DGYLYIVDRKKELIKykgfqvapAE---------LEAvllehpGVADAAvigipdevsGELP 436
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2203519039 450 KGCIVvghLRPSPalfieayhdsisTISEDGLKELVLRRLEDFnarqlkheritdKRL---IFIVDEgnLPRT 519
Cdd:cd05911   437 RAYVV---RKPGE------------KLTEKEVKDYVAKKVASY------------KQLrggVVFVDE--IPKS 480
OSB_MenE-like cd17630
O-succinylbenzoic acid-CoA ligase; This family contains O-succinylbenzoyl-CoA (OSB-CoA) ...
289-456 3.68e-07

O-succinylbenzoic acid-CoA ligase; This family contains O-succinylbenzoyl-CoA (OSB-CoA) synthetase (also known as O-succinylbenzoic acid CoA ligase) that belongs to the ANL superfamily and catalyzes the ligation of CoA to o-succinylbenzoate (OSB). It includes MenE in the bacterial menaquinone biosynthesis pathway which is a promising target for the development of novel antibacterial agents. MenE catalyzes CoA ligation via an acyl-adenylate intermediate; tight-binding inhibitors of MenE based on stable acyl-sulfonyladenosine analogs of this intermediate provide a pathway toward the development of optimized MenE inhibitors.


Pssm-ID: 341285 [Multi-domain]  Cd Length: 325  Bit Score: 51.95  E-value: 3.68e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 289 DPAALKLLqemRTVSYGGVPISIADDDWCFQNGIPLMDMYATTECGTlMVSApGKPARFM-----QPVPGISYRFDPftd 363
Cdd:cd17630   106 GPAALKSL---RAVLLGGAPIPPELLERAADRGIPLYTTYGMTETAS-QVAT-KRPDGFGrggvgVLLPGRELRIVE--- 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 364 ttTGADNPASTQLLKLILLADSPQipqpqLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKS--EDsrfIDTKAIEEKI 441
Cdd:cd17630   178 --DGEIWVGGASLAMGYLRGQLVP-----EFNEDGWFTTKDLGELHADGRLTVLGRADNMIISggEN---IQPEEIEAAL 247
                         170
                  ....*....|....*
gi 2203519039 442 NDVcsDLVKGCIVVG 456
Cdd:cd17630   248 AAH--PAVRDAFVVG 260
VL_LC_FACS_like cd05907
Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA ...
38-513 5.18e-07

Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases; This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.


Pssm-ID: 341233 [Multi-domain]  Cd Length: 452  Bit Score: 52.21  E-value: 5.18e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  38 QEWNHITVAEFAAEVDRVAIfvmtELKARGIPPRSAVtVLYSGSRYQDLI--YAIALARASYIP-------QMCPHILTH 108
Cdd:cd05907     1 GVWQPITWAEFAEEVRALAK----GLIALGVEPGDRV-AILSRNRPEWTIadLAILAIGAVPVPiyptssaEQIAYILND 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 109 pgvifalmekAGSKIILydpslepattdcpypkmalnpIETIDSSSTINsdsalptiedlssghadvcffYlTSGSTsGS 188
Cdd:cd05907    76 ----------SEAKALF---------------------VEDPDDLATII---------------------Y-TSGTT-GR 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 189 PKVVPLTQK-FVSTYYKTqfgiwLDGRRFDTQNAFLSRGSICAV-APIIQYFGCLYTGSCIVQPSKMRFSTEELLTLvnv 266
Cdd:cd05907   102 PKGVMLSHRnILSNALAL-----AERLPATEGDRHLSFLPLAHVfERRAGLYVPLLAGARIYFASSAETLLDDLSEV--- 173
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 267 cglnRMTTFgtwLA------PHIQAAK--KDPAALKLL------QEMRTVSYGGVPISIADDDWCFQNGIPLMDMYATTE 332
Cdd:cd05907   174 ----RPTVF---LAvprvweKVYAAIKvkAVPGLKRKLfdlavgGRLRFAASGGAPLPAELLHFFRALGIPVYEGYGLTE 246
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 333 C-GTLMVSAPGKPaRFM---QPVPGISYRFDPftdtttgaDNpastqllklILLADSPQI-------PQP--QLLSEDGN 399
Cdd:cd05907   247 TsAVVTLNPPGDN-RIGtvgKPLPGVEVRIAD--------DG---------EILVRGPNVmlgyyknPEAtaEALDADGW 308
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 400 FHTGDLFEKQLDGsYLF-RGRGDDWIKSEDSRFIDTKAIEEKINDvcSDLVKGCIVVGHLRPSPALFI------------ 466
Cdd:cd05907   309 LHTGDLGEIDEDG-FLHiTGRKKDLIITSGGKNISPEPIENALKA--SPLISQAVVIGDGRPFLVALIvpdpealeawae 385
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|
gi 2203519039 467 ---EAYHDSISTISEDGLKELVLRRLEDFNARQLKHERItdKRLIFIVDE 513
Cdd:cd05907   386 ehgIAYTDVAELAANPAVRAEIEAAVEAANARLSRYEQI--KKFLLLPEP 433
MACS_like_4 cd05969
Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS); This family is most ...
44-430 1.17e-06

Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS); This family is most similar to acetyl-CoA synthetase. Acetyl-CoA synthetase (ACS) catalyzes the formation of acetyl-CoA from acetate, CoA, and ATP. Synthesis of acetyl-CoA is carried out in a two-step reaction. In the first step, the enzyme catalyzes the synthesis of acetyl-AMP intermediate from acetate and ATP. In the second step, acetyl-AMP reacts with CoA to produce acetyl-CoA. This enzyme is only present in bacteria.


Pssm-ID: 341273 [Multi-domain]  Cd Length: 442  Bit Score: 50.96  E-value: 1.17e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  44 TVAEFAAEVDRVAifvmTELKARGIPPRSAVTVLysGSRYQDLiYAIALARASYIPQMCPHILTH-PGVIFALMEKAGSK 122
Cdd:cd05969     2 TFAQLKVLSARFA----NVLKSLGVGKGDRVFVL--SPRSPEL-YFSMLGIGKIGAVICPLFSAFgPEAIRDRLENSEAK 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 123 IILYDPSLepattdcpYPKMalnpietidssstinsdsalpTIEDLSsghadvcFFYLTSGSTsGSPKVVPLTQKFVSTY 202
Cdd:cd05969    75 VLITTEEL--------YERT---------------------DPEDPT-------LLHYTSGTT-GTPKGVLHVHDAMIFY 117
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 203 YKT---QFGIWLDGRRFDTQNAFLSRGSICAV-APIIQyfgclytgSCIVQPSKMRFSTEELLTLVNVCGLNRMTTfgtw 278
Cdd:cd05969   118 YFTgkyVLDLHPDDIYWCTADPGWVTGTVYGIwAPWLN--------GVTNVVYEGRFDAESWYGIIERVKVTVWYT---- 185
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 279 lAP-HIQAAKK---DPAALKLLQEMRTVSYGGVPISIADDDWCFQN-GIPLMDMYATTECGTLMV----SAPGKPARFMQ 349
Cdd:cd05969   186 -APtAIRMLMKegdELARKYDLSSLRFIHSVGEPLNPEAIRWGMEVfGVPIHDTWWQTETGSIMIanypCMPIKPGSMGK 264
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 350 PVPG-----ISYRFDPFTDTTTGadnpastqllKLILLADSPQIPQPQLLSE--------DGNFHTGDLFEKQLDGSYLF 416
Cdd:cd05969   265 PLPGvkaavVDENGNELPPGTKG----------ILALKPGWPSMFRGIWNDEeryknsfiDGWYLTGDLAYRDEDGYFWF 334
                         410
                  ....*....|....
gi 2203519039 417 RGRGDDWIKSEDSR 430
Cdd:cd05969   335 VGRADDIIKTSGHR 348
FAA1 COG1022
Long-chain acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism];
4-513 1.26e-06

Long-chain acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism];


Pssm-ID: 440645 [Multi-domain]  Cd Length: 603  Bit Score: 51.25  E-value: 1.26e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039   4 ALEDNHIA-LLQHRAKNSGNTVLFKLPilrgsePPQEWNHITVAEFAAEVDRVAIFvmteLKARGIPPRSAVtVLYSGSR 82
Cdd:COG1022     7 VPPADTLPdLLRRRAARFPDRVALREK------EDGIWQSLTWAEFAERVRALAAG----LLALGVKPGDRV-AILSDNR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  83 YQDLI--YAIALARASYIP--------QMcPHILTHPGVIFALMEKAGskiiLYDpSLEPATTDCPypkmALNPIETIDs 152
Cdd:COG1022    76 PEWVIadLAILAAGAVTVPiyptssaeEV-AYILNDSGAKVLFVEDQE----QLD-KLLEVRDELP----SLRHIVVLD- 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 153 SSTINSDSALPTIEDL------------------SSGHADVCFFYLTSGSTsGSPKVVPLTQK-FVStyyktQFGIWLDG 213
Cdd:COG1022   145 PRGLRDDPRLLSLDELlalgrevadpaelearraAVKPDDLATIIYTSGTT-GRPKGVMLTHRnLLS-----NARALLER 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 214 RRFDTQNAFLS---------RgsicavapIIQYFgCLYTGSCI---------------VQPSKMrFST----EELLTLVN 265
Cdd:COG1022   219 LPLGPGDRTLSflplahvfeR--------TVSYY-ALAAGATVafaespdtlaedlreVKPTFM-LAVprvwEKVYAGIQ 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 266 VcGLNRMTTFGTWL-----------APHIQAAKKDPAALKL------------LQE-----MRTVSYGGVPISiADDDWC 317
Cdd:COG1022   289 A-KAEEAGGLKRKLfrwalavgrryARARLAGKSPSLLLRLkhaladklvfskLREalggrLRFAVSGGAALG-PELARF 366
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 318 FQN-GIPLMDMYATTE-CGTLMVSAPGKPaRFM---QPVPGISYRFdpftdtttGAD----------------NPASTQl 376
Cdd:COG1022   367 FRAlGIPVLEGYGLTEtSPVITVNRPGDN-RIGtvgPPLPGVEVKI--------AEDgeilvrgpnvmkgyykNPEATA- 436
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 377 lklilladspqipqpQLLSEDGNFHTGDLFEKQLDGsYLF-RGRGDDWIKSEDSRFIDTKAIEEKINDvcSDLVKGCIVV 455
Cdd:COG1022   437 ---------------EAFDADGWLHTGDIGELDEDG-FLRiTGRKKDLIVTSGGKNVAPQPIENALKA--SPLIEQAVVV 498
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2203519039 456 GHLRPSPALFI----EA-----------YHDSISTISEDGLKELVLRRLEDFNARQLKHERItdKRLIFIVDE 513
Cdd:COG1022   499 GDGRPFLAALIvpdfEAlgewaeenglpYTSYAELAQDPEVRALIQEEVDRANAGLSRAEQI--KRFRLLPKE 569
MACS_like_2 cd05973
Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the ...
290-489 7.23e-06

Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.


Pssm-ID: 341277 [Multi-domain]  Cd Length: 437  Bit Score: 48.28  E-value: 7.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 290 PAALKLlqEMRTVSYGGVPISIADDDWCFQN-GIPLMDMYATTECGTLMVS--APGKPAR---FMQPVPGisYRFDPFTD 363
Cdd:cd05973   200 PARPKG--RLRRVSSAGEPLTPEVIRWFDAAlGVPIHDHYGQTELGMVLANhhALEHPVHagsAGRAMPG--WRVAVLDD 275
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 364 TTtgaDNPASTQLLKL-ILLADSP--------QIPQPqllSEDGNFH-TGDLFEKQLDGSYLFRGRGDDWIKSE------ 427
Cdd:cd05973   276 DG---DELGPGEPGRLaIDIANSPlmwfrgyqLPDTP---AIDGGYYlTGDTVEFDPDGSFSFIGRADDVITMSgyrigp 349
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2203519039 428 ---DSRFIDTKAIEE-----KINDVCSDLVKGCIVV--GHlRPSPALfieayhdsistisEDGLKELVLRRL 489
Cdd:cd05973   350 fdvESALIEHPAVAEaavigVPDPERTEVVKAFVVLrgGH-EGTPAL-------------ADELQLHVKKRL 407
FACL_fum10p_like cd05926
Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis; FACL ...
43-256 1.29e-05

Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis; FACL catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Fum10p is a fatty acid CoA ligase involved in the synthesis of fumonisin, a polyketide mycotoxin, in Gibberella moniliformis.


Pssm-ID: 341249 [Multi-domain]  Cd Length: 493  Bit Score: 47.69  E-value: 1.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  43 ITVAEFAAEVDRVAIFvmteLKARGIPPRSAVTV-LYSGSRYQDLIYAIALARA---------------SYIPQMCPHIL 106
Cdd:cd05926    15 LTYADLAELVDDLARQ----LAALGIKKGDRVAIaLPNGLEFVVAFLAAARAGAvvaplnpaykkaefeFYLADLGSKLV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 107 THPGVIFALMEKAGSKIILY--DPSLEPATTDcpypkmalnpieTIDSSSTINSDSALPTiEDLSSGHA---DVCFFYLT 181
Cdd:cd05926    91 LTPKGELGPASRAASKLGLAilELALDVGVLI------------RAPSAESLSNLLADKK-NAKSEGVPlpdDLALILHT 157
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2203519039 182 SGSTsGSPKVVPLTQKFV---STYYKTQFGIWLDGRRFDTQNAFLSRGSICAVAPIiqyfgcLYTGSCIVQPskMRFS 256
Cdd:cd05926   158 SGTT-GRPKGVPLTHRNLaasATNITNTYKLTPDDRTLVVMPLFHVHGLVASLLST------LAAGGSVVLP--PRFS 226
LC_FACL_like cd05914
Uncharacterized subfamily of fatty acid CoA ligase (FACL); The members of this family are ...
321-505 4.76e-05

Uncharacterized subfamily of fatty acid CoA ligase (FACL); The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.


Pssm-ID: 341240 [Multi-domain]  Cd Length: 463  Bit Score: 45.90  E-value: 4.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 321 GIPLMDMYATTECGTLMVSAPgkPARFM-----QPVPGISYRFD-PFTDTTTGA-------------DNPASTQllklil 381
Cdd:cd05914   258 GFPYTIGYGMTETAPIISYSP--PNRIRlgsagKVIDGVEVRIDsPDPATGEGEiivrgpnvmkgyyKNPEATA------ 329
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 382 ladspqipqpQLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEDSRFIDTKAIEEKINDVCSDLVKgCIVVGHlrps 461
Cdd:cd05914   330 ----------EAFDKDGWFHTGDLGKIDAEGYLYIRGRKKEMIVLSSGKNIYPEEIEAKINNMPFVLES-LVVVQE---- 394
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2203519039 462 palfieayhdsistisedglKELVLRRLEDFNARQLKHERITDK 505
Cdd:cd05914   395 --------------------KKLVALAYIDPDFLDVKALKQRNI 418
FCS cd05921
Feruloyl-CoA synthetase (FCS); Feruloyl-CoA synthetase is an essential enzyme in the feruloyl ...
35-197 4.63e-04

Feruloyl-CoA synthetase (FCS); Feruloyl-CoA synthetase is an essential enzyme in the feruloyl acid degradation pathway and enables some proteobacteria to grow on media containing feruloyl acid as the sole carbon source. It catalyzes the transfer of CoA to the carboxyl group of ferulic acid, which then forms feruloyl-CoA in the presence of ATP and Mg2. The resulting feruloyl-CoA is further degraded to vanillin and acetyl-CoA. Feruloyl-CoA synthetase (FCS) is a subfamily of the adenylate-forming enzymes superfamily.


Pssm-ID: 341245 [Multi-domain]  Cd Length: 561  Bit Score: 42.80  E-value: 4.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  35 EPPQEWNHITVAEFAAEVDRVAIFvmteLKARGIPPRSAVTVLySGSRYQDLIYAIAlARASYIPQmCP----------- 103
Cdd:cd05921    18 EGNGGWRRVTYAEALRQVRAIAQG----LLDLGLSAERPLLIL-SGNSIEHALMALA-AMYAGVPA-APvspayslmsqd 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 104 -----HI--LTHPGVIFA----LMEKAGSKIILYDPSLEPATTDCPYPKMALNPiETIDSSSTINSDSALPTIedlssGH 172
Cdd:cd05921    91 laklkHLfeLLKPGLVFAqdaaPFARALAAIFPLGTPLVVSRNAVAGRGAISFA-ELAATPPTAAVDAAFAAV-----GP 164
                         170       180
                  ....*....|....*....|....*
gi 2203519039 173 ADVCFFYLTSGSTsGSPKVVPLTQK 197
Cdd:cd05921   165 DTVAKFLFTSGST-GLPKAVINTQR 188
4CL cd05904
4-Coumarate-CoA Ligase (4CL); 4-Coumarate:coenzyme A ligase is a key enzyme in the ...
42-416 1.49e-03

4-Coumarate-CoA Ligase (4CL); 4-Coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids.


Pssm-ID: 341230 [Multi-domain]  Cd Length: 505  Bit Score: 41.07  E-value: 1.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  42 HITVAEFAAEVDRVAifvmTELKARGIPPRSAVTVLYSGSRYQDLIYAIALARASYIPQMCPhiLTHPGVIFALMEKAGS 121
Cdd:cd05904    32 ALTYAELERRVRRLA----AGLAKRGGRKGDVVLLLSPNSIEFPVAFLAVLSLGAVVTTANP--LSTPAEIAKQVKDSGA 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 122 KIILYDPSLEPATTDCPYPKMALNPIE----TIDSSSTINSDSALPTIEDLSSghaDVCFFYLTSGsTSGSPKVVPLTQK 197
Cdd:cd05904   106 KLAFTTAELAEKLASLALPVVLLDSAEfdslSFSDLLFEADEAEPPVVVIKQD---DVAALLYSSG-TTGRSKGVMLTHR 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 198 -FVSTyykTQFGIWLDGRRFDTQNAFLsrgsicAVAPIIQYFG---CLYT----GSCIVQPSkmRFSTEELLTLVNVCGL 269
Cdd:cd05904   182 nLIAM---VAQFVAGEGSNSDSEDVFL------CVLPMFHIYGlssFALGllrlGATVVVMP--RFDLEELLAAIERYKV 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 270 NRMttfgtWLAPHIQAA-KKDPAALKL-LQEMRTVSYGGVPISIADDDWCFQN--GIPLMDMYATTE--CGTLMVSAPGK 343
Cdd:cd05904   251 THL-----PVVPPIVLAlVKSPIVDKYdLSSLRQIMSGAAPLGKELIEAFRAKfpNVDLGQGYGMTEstGVVAMCFAPEK 325
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 344 -PARfmqpvPGISYRFDP-----FTDTTTGADNPASTQ---LLKlilladSPQIPQPQL---------LSEDGNFHTGDL 405
Cdd:cd05904   326 dRAK-----YGSVGRLVPnveakIVDPETGESLPPNQTgelWIR------GPSIMKGYLnnpeataatIDKEGWLHTGDL 394
                         410
                  ....*....|.
gi 2203519039 406 FEKQLDGsYLF 416
Cdd:cd05904   395 CYIDEDG-YLF 404
MCS cd05941
Malonyl-CoA synthetase (MCS); MCS catalyzes the formation of malonyl-CoA in a two-step ...
181-519 2.43e-03

Malonyl-CoA synthetase (MCS); MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility.


Pssm-ID: 341264 [Multi-domain]  Cd Length: 442  Bit Score: 40.35  E-value: 2.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 181 TSGSTsGSPKVVPLTQKFVSTYYKTQFGIWldgrrfdtqnAFLSRGSICAVAPIIQYFG------C-LYTG-SCIVQPsk 252
Cdd:cd05941    97 TSGTT-GRPKGVVLTHANLAANVRALVDAW----------RWTEDDVLLHVLPLHHVHGlvnallCpLFAGaSVEFLP-- 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 253 mRFSTEELLTLvnvCGLNRMT------TFGTWLAPHIQAAKKDPA-ALKLLQE-MRTVSYGGVPISIAD-DDWCFQNGIP 323
Cdd:cd05941   164 -KFDPKEVAIS---RLMPSITvfmgvpTIYTRLLQYYEAHFTDPQfARAAAAErLRLMVSGSAALPVPTlEEWEAITGHT 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 324 LMDMYATTECGTLM---VSAPGKPARFMQPVPGISYRFdpfTDTTTGADNPASTQllklillaDSPQIPQPQLLSE---- 396
Cdd:cd05941   240 LLERYGMTEIGMALsnpLDGERRPGTVGMPLPGVQARI---VDEETGEPLPRGEV--------GEIQVRGPSVFKEywnk 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 397 ----------DGNFHTGDLFEKQLDGSYLFRGRG-DDWIKSEDSRfIDTKAIEEKINDvcSDLVKGCIVVGhlRPSPAL- 464
Cdd:cd05941   309 peatkeeftdDGWFKTGDLGVVDEDGYYWILGRSsVDIIKSGGYK-VSALEIERVLLA--HPGVSECAVIG--VPDPDWg 383
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2203519039 465 ----FIEAYHDSISTISEDGLKELVLRRLEdfnarqlKHERitDKRLIFiVDEgnLPRT 519
Cdd:cd05941   384 ervvAVVVLRAGAAALSLEELKEWAKQRLA-------PYKR--PRRLIL-VDE--LPRN 430
LC_FACS_like cd17640
Long-chain fatty acid CoA synthetase; This family includes long-chain fatty acid (C12-C20) CoA ...
321-457 2.60e-03

Long-chain fatty acid CoA synthetase; This family includes long-chain fatty acid (C12-C20) CoA synthetases, including an Arabidopsis gene At4g14070 that plays a role in activation and elongation of exogenous fatty acids. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.


Pssm-ID: 341295 [Multi-domain]  Cd Length: 468  Bit Score: 40.42  E-value: 2.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 321 GIPLMDMYATTEcgTLMVSAPGKPARFM-----QPVPGISYRF-DPFTDTTTgadNPAStqllKLILLADSPQI-----P 389
Cdd:cd17640   237 GIEVLNGYGLTE--TSPVVSARRLKCNVrgsvgRPLPGTEIKIvDPEGNVVL---PPGE----KGIVWVRGPQVmkgyyK 307
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2203519039 390 QP----QLLSEDGNFHTGDLFEKQLDGSYLFRGRGDDWIKSEDSRFIDTKAIEEKIndVCSDLVKGCIVVGH 457
Cdd:cd17640   308 NPeatsKVLDSDGWFNTGDLGWLTCGGELVLTGRAKDTIVLSNGENVEPQPIEEAL--MRSPFIEQIMVVGQ 377
PRK07867 PRK07867
acyl-CoA synthetase; Validated
397-438 4.13e-03

acyl-CoA synthetase; Validated


Pssm-ID: 236120 [Multi-domain]  Cd Length: 529  Bit Score: 39.66  E-value: 4.13e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2203519039 397 DGNFHTGDLFEKQLDGSYLFRGRGDDWIKSeDSRFIDTKAIE 438
Cdd:PRK07867  380 GGVYWSGDLAYRDADGYAYFAGRLGDWMRV-DGENLGTAPIE 420
A_NRPS_TubE_like cd05906
The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) ...
43-197 4.71e-03

The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents; The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPSs that synthesize toxins and antitumor agents; for example, TubE for Tubulysine, CrpA for cryptophycin, TdiA for terrequinone A, KtzG for kutzneride, and Vlm1/Vlm2 for Valinomycin. Nonribosomal peptide synthetases are large multifunctional enzymes which synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.


Pssm-ID: 341232 [Multi-domain]  Cd Length: 540  Bit Score: 39.57  E-value: 4.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039  43 ITVAEFAAEVDRVAifvmTELKARGIPPRSAVTVLysGSRYQDLIYAI-ALARASYIPQMCP---------HILTHpgvI 112
Cdd:cd05906    40 QSYQDLLEDARRLA----AGLRQLGLRPGDSVILQ--FDDNEDFIPAFwACVLAGFVPAPLTvpptydepnARLRK---L 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2203519039 113 FALMEKAGSKIILYDPSLEPAttdcpypkmaLNPIETIDSsstiNSDSALPTIEDLSSGHA----------DVCFFYLTS 182
Cdd:cd05906   111 RHIWQLLGSPVVLTDAELVAE----------FAGLETLSG----LPGIRVLSIEELLDTAAdhdlpqsrpdDLALLMLTS 176
                         170
                  ....*....|....*
gi 2203519039 183 GSTsGSPKVVPLTQK 197
Cdd:cd05906   177 GST-GFPKAVPLTHR 190
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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