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Conserved domains on  [gi|178194|gb|AAA35513|]
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kidney alpha-2-adrenergic receptor [Homo sapiens]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
60-447 1.92e-163

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15323:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 261  Bit Score: 461.33  E-value: 1.92e-163
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15323   9 FLIVFTIVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCIGSF 219
Cdd:cd15323  89 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDPEGDVYPQCKLNDETWYILSSCIGSF 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15323 169 FAPCLIMILVYIRIYRVAK------------------------------------------------------------- 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRF 379
Cdd:cd15323 188 --------------------------------------------------------------------------AREKRF 193
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15323 194 TFVLAVVMGVFVVCWFPFFFSYSLYGICREACEVPEPLFKFFFWIGYCNSSLNPVIYTIFNQDFRRSF 261
 
Name Accession Description Interval E-value
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
60-447 1.92e-163

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 461.33  E-value: 1.92e-163
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15323   9 FLIVFTIVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCIGSF 219
Cdd:cd15323  89 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDPEGDVYPQCKLNDETWYILSSCIGSF 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15323 169 FAPCLIMILVYIRIYRVAK------------------------------------------------------------- 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRF 379
Cdd:cd15323 188 --------------------------------------------------------------------------AREKRF 193
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15323 194 TFVLAVVMGVFVVCWFPFFFSYSLYGICREACEVPEPLFKFFFWIGYCNSSLNPVIYTIFNQDFRRSF 261
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
68-436 2.95e-50

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 171.33  E-value: 2.95e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194      68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVHLCAIS 146
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGdWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     147 LDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAAyPQCGLNDET------WYILSSCIGS 218
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLfgWTLTVPEGNV-TVCFIDFPEdlskpvSYTLLISVLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     219 FFAPCLIMGLVYARIYRVAKRRTRTLSEKRApvgpdgaspttenglgaaageartgtarprppTWSRTRAAQrprggapg 298
Cdd:pfam00001 160 FLLPLLVILVCYTLIIRTLRKSASKQKSSER--------------------------------TQRRRKALK-------- 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqarekr 378
Cdd:pfam00001     --------------------------------------------------------------------------------
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194     379 ftfVLAVVMGVFVLCWFPFFFIYSLYGICREaCQVPGPLFKFFF---WIGYCNSSLNPVIY 436
Cdd:pfam00001 200 ---TLAVVVVVFILCWLPYHIVNLLDSLALD-CELSRLLDKALSvtlWLAYVNSCLNPIIY 256
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
61-249 8.61e-15

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 75.20  E-value: 8.61e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     61 LIVFTVVGNVLVVIaVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:PHA03087  50 IFFFGLVGNIIVIY-VLTKTKIKTPMDIYLLNLAVSDLLF-VMTLPFQIYYYILFQWSFGEFACKIVSGLYYIGFYNSMN 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV---------SLYRQPDgaaYPQCGLNDETWYI 211
Cdd:PHA03087 128 FITVMSVDRYIAIVHPVKSNKINTVKYGYIVSLVIWIISIIETTPILFvyttkkdheTLICCMF---YNNKTMNWKLFIN 204
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 178194    212 LSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:PHA03087 205 FEINIIGMLIPLTILLYCYSKILITLKGINKSKKNKKA 242
 
Name Accession Description Interval E-value
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
60-447 1.92e-163

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 461.33  E-value: 1.92e-163
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15323   9 FLIVFTIVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCIGSF 219
Cdd:cd15323  89 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDPEGDVYPQCKLNDETWYILSSCIGSF 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15323 169 FAPCLIMILVYIRIYRVAK------------------------------------------------------------- 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRF 379
Cdd:cd15323 188 --------------------------------------------------------------------------AREKRF 193
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15323 194 TFVLAVVMGVFVVCWFPFFFSYSLYGICREACEVPEPLFKFFFWIGYCNSSLNPVIYTIFNQDFRRSF 261
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
60-447 8.37e-136

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 391.32  E-value: 8.37e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15059   9 VVILLIIVGNVLVIVAVLTSRKLRAPQNWFLVSLAVADILVGLLIMPFSLVNELMGYWYFGSVWCEIWLALDVLFCTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLY-RQPDGAAYPQCGLNDETWYILSSCIGS 218
Cdd:cd15059  89 VNLCAISLDRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISLPPLFGWKdEQPWHGAEPQCELSDDPGYVLFSSIGS 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 FFAPCLIMGLVYARIYRVAKRrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapg 298
Cdd:cd15059 169 FYIPLLIMIIVYARIYRAAKR----------------------------------------------------------- 189
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKR 378
Cdd:cd15059 190 ----------------------------------------------------------------------------KERR 193
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   379 FTFVLAVVMGVFVLCWFPFFFIYSLYGICrEACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15059 194 FTLVLGVVMGAFVLCWLPFFFTYPLVVVC-KTCGVPELLFKFFFWLGYCNSALNPVIYTIFNKDFRRAF 261
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
46-447 1.54e-133

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 385.81  E-value: 1.54e-133
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    46 YSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCG 125
Cdd:cd15321   1 YSVQATAAIAAAITFLILFTIFGNVLVIIAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELMGYWYFRKTWCE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   126 VYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQ-PDGAAYPQCGL 204
Cdd:cd15321  81 IYLALDVLFCTSSIVHLCAISLDRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISLPPLIYKGKQkDEQGGLPQCKL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   205 NDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKRrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptws 284
Cdd:cd15321 161 NEEAWYILSSSIGSFFAPCLIMILVYLRIYLIAKN--------------------------------------------- 195
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   285 rtraaqrprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrars 364
Cdd:cd15321     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   365 svcrrkvaqaREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFR 444
Cdd:cd15321 196 ----------REKRFTFVLAVVIGVFVLCWFPFFFSYSLGAICPELCKVPHSLFQFFFWIGYCNSSLNPVIYTIFNQDFR 265

                ...
gi 178194   445 PSF 447
Cdd:cd15321 266 RAF 268
7tmA_alpha2A_AR cd15322
alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
60-447 1.05e-127

alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320445 [Multi-domain]  Cd Length: 259  Bit Score: 370.43  E-value: 1.05e-127
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15322   9 LLMLLTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGKVWCEIYLALDVLFCTSSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCIGSF 219
Cdd:cd15322  89 VHLCAISLDRYWSITQAIEYNLKRTPRRIKCIIFIVWVISAVISFPPLITIEKKSGQPEGPICKINDEKWYIISSCIGSF 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAKRrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15322 169 FAPCLIMVLVYIRIYQIAKN------------------------------------------------------------ 188
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKRF 379
Cdd:cd15322 189 ---------------------------------------------------------------------------REKRF 193
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICReaCQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15322 194 TFVLAVVIGVFVICWFPFFFTYTLTAVCD--CSVPETLFKFFFWFGYCNSSLNPVIYTIFNHDFRRAF 259
7tmA_alpha-2D_AR cd15324
alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
61-447 7.03e-122

alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320447 [Multi-domain]  Cd Length: 256  Bit Score: 355.72  E-value: 7.03e-122
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15324  10 IILVTIVGNVLVVVAVFTSRALRAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGSTWCAFYLALDVLFCTSSIV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQpdgaaYPQCGLNDETWYILSSCIGSFF 220
Cdd:cd15324  90 HLCAISLDRYWSVTKAVSYNLKRTPKRIKRMIAVVWVISAVISFPPLLMTKHD-----EWECLLNDETWYILSSCTVSFF 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   221 APCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgpl 300
Cdd:cd15324 165 APGLIMILVYCKIYRVAK-------------------------------------------------------------- 182
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   301 rrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRFT 380
Cdd:cd15324 183 -------------------------------------------------------------------------MREKRFT 189
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   381 FVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15324 190 FVLAVVMGVFVLCWFPFFFTYSLHAVCRKRCGIPDALFNLFFWIGYCNSSVNPIIYTIFNRDFRKAF 256
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
60-447 1.07e-90

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 275.98  E-value: 1.07e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd14967   8 LIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLCCTASI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLY-RQPDGAAYPQCGLNDETWYILSSCIGS 218
Cdd:cd14967  88 LNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRdETQPSVVDCECEFTPNKIYVLVSSVIS 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 FFAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapg 298
Cdd:cd14967 168 FFIPLLIMIVLYARIFRVAR------------------------------------------------------------ 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKR 378
Cdd:cd14967 188 ----------------------------------------------------------------------------RELK 191
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   379 FTFVLAVVMGVFVLCWFPFFFIYSLYGICReACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd14967 192 AAKTLAIIVGAFLLCWLPFFIIYLVSAFCP-PDCVPPILYAVFFWLGYLNSALNPIIYALFNRDFRRAF 259
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
60-447 6.82e-74

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 232.99  E-value: 6.82e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15064   9 LIILATILGNALVIAAILLTRKLHTPANYLIASLAVADLLVAVLVMPLSAVYELTGRWILGQVLCDIWISLDVTCCTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYPQCGLNDETWYILSSCIGSF 219
Cdd:cd15064  89 LHLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFG-WRTPDSEDPSECLISQDIGYTIFSTFGAF 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAKRrtrtlsEKRApvgpdgaspttenglgaaageARTgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15064 168 YIPLLLMLILYWKIYRAAAR------ERKA---------------------AKT-------------------------- 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqarekrf 379
Cdd:cd15064     --------------------------------------------------------------------------------
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 tfvLAVVMGVFVLCWFPFFFIYSLYGICREaCQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15064 195 ---LGIILGAFIVCWLPFFLVALIVPLCSH-CWIPLALKSFFLWLGYFNSLINPLIYTFFNKDFRKAF 258
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
60-447 4.95e-72

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 228.31  E-value: 4.95e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15329   9 IIILGTVVGNALVIIAVCLVKKLRTPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILCDVWISFDVLLCTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAayPQCGLNDETWYILSSCIGSF 219
Cdd:cd15329  89 LNLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISIPPLFGWKNKVNDP--GVCQVSQDFGYQIYATFGAF 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15329 167 YIPLIVMLVLYYKIYRAAK------------------------------------------------------------- 185
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKRF 379
Cdd:cd15329 186 ---------------------------------------------------------------------------SERKA 190
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSL--YGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15329 191 IKTLGIIMGAFTLCWLPFFILALLrpFLKPIKCSCIPLWLSRLFLWLGYANSFLNPIIYAKFNREFRTPF 260
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
61-447 8.52e-72

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 227.70  E-value: 8.52e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15060  10 IIAFTIVGNILVILSVFTYRPLRIVQNFFIVSLAVADLAVAIFVLPLNVAYFLLGKWLFGIHLCQMWLTCDILCCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAA-YPQCGLNDETWYILSSCIGSF 219
Cdd:cd15060  90 NLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIGWNDWPENFTeTTPCTLTEEKGYVIYSSSGSF 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRvakrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15060 170 FIPLLIMTIVYVKIFI---------------------------------------------------------------- 185
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvAQAREKRF 379
Cdd:cd15060 186 ------------------------------------------------------------------------ATSKERRA 193
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICrEACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15060 194 ARTLGIIMGVFVVCWLPFFLMYVILPFC-ETCSPSAKVVNFITWLGYVNSALNPVIYTIFNLDFRRAF 260
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
60-447 1.91e-71

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 228.00  E-value: 1.91e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15065   8 LIIVLAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAVVNDLLGYWLFGETFCNIWISFDVMCSTASI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL----------VSLYRQPDGAAYPQCGLNDETW 209
Cdd:cd15065  88 LNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLPIhlgwhrlsqdEIKGLNHASNPKPSCALDLNPT 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   210 Y-ILSSCIgSFFAPCLIMGLVYARIYRVAKRRTRtlsekrapvgpdgaspttenglgaaageartgtarprpptwsRTRA 288
Cdd:cd15065 168 YaVVSSLI-SFYIPCLVMLLIYSRLYLYARKHVV------------------------------------------NIKS 204
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   289 AQRPrggapgplrrggrrragaeggaggadgqgagpgaaqsgALTASRSPGPGGRLSRASSRsvefflsrrrrarssvcr 368
Cdd:cd15065 205 QKLP--------------------------------------SESGSKFQVPSLSSKHNNQG------------------ 228
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   369 rkvaqAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICreACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15065 229 -----VSDHKAAVTLGIIMGVFLICWLPFFIINIIAAFC--KTCIPPKCFKILTWLGYFNSCLNPIIYSIFNSEFRRAF 300
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
60-447 2.35e-65

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 211.06  E-value: 2.35e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF---TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELM-AYWYFGQVWCGVYLALDVLFC 135
Cdd:cd15067   5 VLSLFclvTVAGNLLVILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMPFSILHEMTgGYWLFGRDWCDVWHSFDVLAS 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 TSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVsLYR--QPDGAAYPQCGLNDETWY-IL 212
Cdd:cd15067  85 TASILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALISFPAIA-WWRavDPGPSPPNQCLFTDDSGYlIF 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   213 SSCIgSFFAPCLIMGLVYARIYRVAKRrtrtlsEKRApvgpdgaspttenglgaaageARTgtarprpptwsrtraaqrp 292
Cdd:cd15067 164 SSCV-SFYIPLVVMLFTYYRIYRAAAK------EQKA---------------------AKT------------------- 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   293 rggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkva 372
Cdd:cd15067     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   373 qarekrftfvLAVVMGVFVLCWFPFFFIYSLYGICREACQV-PGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15067 197 ----------LGIVMGVFILCWLPFFVTNILIGFCPSNCVSnPDILFPLVTWLGYINSGMNPIIYACSSRDFRRAF 262
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
61-447 1.89e-63

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 206.04  E-value: 1.89e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELM-AYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15053  10 LPLLTVFGNVLVIMSVFRERSLQTATNYFIVSLAVADLLVAILVMPFAVYVEVNgGKWYLGPILCDIYIAMDVMCSTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLyrQPDGAAYPQ-CGLNDETWYILSScIGS 218
Cdd:cd15053  90 FNLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFGL--NNVPYRDPEeCRFYNPDFIIYSS-ISS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 FFAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapg 298
Cdd:cd15053 167 FYIPCIVMLLLYYRIFRALR------------------------------------------------------------ 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKR 378
Cdd:cd15053 187 ----------------------------------------------------------------------------REKK 190
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   379 FTFVLAVVMGVFVLCWFPFFFIYSLYGIC----REACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15053 191 ATKTLAIVLGVFLFCWLPFFTLNILNAICpklqNQSCHVGPALFSLTTWLGYVNSFLNPIIYTIFNIEFRKAF 263
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
61-447 3.21e-63

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 206.41  E-value: 3.21e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15051  10 IILLTVIGNVLVCLAVAVNRRLRNLTNYFIVSLAVTDLLLGLLVLPFSAIYELRGEWPLGPVFCNIYISLDVMLCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYP-----QCGLNDETWYILSSC 215
Cdd:cd15051  90 NLFAISLDRYLAITAPLRYPSRVTPRRVAIALAAIWVVSLAVSFLPIHLGWNTPDGRVQNgdtpnQCRFELNPPYVLLVA 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   216 IGSFFAPCLIMGLVYARIYRVAKRRTRtlsekrapvgpdgaspttenglgaaageartgtarprpptwsRTRAAQRprgg 295
Cdd:cd15051 170 IGTFYLPLLIMCGVYLRIFRIAREQAK------------------------------------------RINALTP---- 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   296 apgplrrggrrragaeggaggadgqgagpgaaqsgALTASRSPGPggrlsrassrsvefflsrrrrarssvcrrkvAQAR 375
Cdd:cd15051 204 -----------------------------------ASTANSSKSA-------------------------------ATAR 217
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 178194   376 EKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICreACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15051 218 EHKATVTLAAVLGAFIICWFPYFTYFTYRGLC--GDNINETALSVVLWLGYANSALNPILYAFLNRDFRRAF 287
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
60-447 1.77e-62

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 204.97  E-value: 1.77e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAP-QNLFLVSLASADILVATLVMPFSLANELMAYWYFGQvWCGVYLALDVLFCTSS 138
Cdd:cd15057   9 LLVLLTLLGNALVIAAVLRFRHLRSKvTNYFIVSLAVSDLLVAILVMPWAAVNEVAGYWPFGS-FCDVWVSFDIMCSTAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL-VSLYRQPDGAAY-------PQCGLNDETWY 210
Cdd:cd15057  88 ILNLCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFIPVqLGWHRADDTSEAlalyadpCQCDSSLNRTY 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSekrapvgpdgaspttenglgaaageartgtarprpptwSRTRAAQ 290
Cdd:cd15057 168 AISSSLISFYIPVAIMIVTYTRIYRIARRQIRRIA--------------------------------------ALERAAQ 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   291 RPRGGApgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggRLSRASSRsvefflsrrrrarssvcrrk 370
Cdd:cd15057 210 ESTNPD----------------------------------------------SSLRSSLR-------------------- 223
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   371 vaqaREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREACQ----VPGPLFKFFFWIGYCNSSLNPVIYTvFNQDFRPS 446
Cdd:cd15057 224 ----RETKALKTLSIIMGVFVCCWLPFFILNCVLPFCDLRTAqfpcVPDTTFIVFVWLGWANSSLNPIIYA-FNADFRKA 298

                .
gi 178194   447 F 447
Cdd:cd15057 299 F 299
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
60-447 9.47e-62

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 201.84  E-value: 9.47e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15066   8 LIILAAIFGNLLVIISVMRHRKLRVITNYFVVSLAMADMLVALCAMTFNASVEITGRWMFGYFMCDVWNSLDVYFSTASI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPP-----------LVSLYRQPDgaaypQCGLNDET 208
Cdd:cd15066  88 LHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPiflgwytteehLQYRKTHPD-----QCEFVVNK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   209 WYILSSCIGSFFAPCLIMGLVYARIYRVAKRrtrtlsEKRApvgpdgaspttenglgaaageARTgtarprpptwsrtra 288
Cdd:cd15066 163 IYALISSSVSFWIPCIVMIFTYYRIYLEAKR------EHKA---------------------AKT--------------- 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   289 aqrprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcr 368
Cdd:cd15066     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   369 rkvaqarekrftfvLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15066 201 --------------LGIIMGAFILCWLPFFLWYVTTTLCGDACPYPPILVSILFWIGYFNSTLNPLIYAYFNRDFREAF 265
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
60-447 1.26e-60

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 198.87  E-value: 1.26e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15063   9 FLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVDVWMCTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYP--------QCGLNDETWYI 211
Cdd:cd15063  89 LNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFVICFPPLVGWNDGKDGIMDYsgssslpcTCELTNGRGYV 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   212 LSSCIGSFFAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqr 291
Cdd:cd15063 169 IYSALGSFYIPMLVMLFFYFRIYRAAR----------------------------------------------------- 195
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   292 prggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkv 371
Cdd:cd15063     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   372 aqaREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICrEACqVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15063 196 ---METKAAKTVAIIVGCFIFCWLPFFTVYLVRAFC-EDC-IPPLLFSVFFWLGYCNSALNPCIYALFSRDFRFAF 266
7tmA_5-HT1A_invertebrates cd15331
serotonin receptor subtype 1A from invertebrates, member of the class A family of ...
61-447 8.95e-59

serotonin receptor subtype 1A from invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320454 [Multi-domain]  Cd Length: 261  Bit Score: 193.72  E-value: 8.95e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15331  10 LILATIIGNVFVIAAILLERSLQGVSNYLILSLAVADLMVAVLVMPLSAVYEVSQHWFLGPEVCDMWISMDVLCCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQaVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYP----QCGLNDETWYILSSCI 216
Cdd:cd15331  90 HLVAIALDRYWAVTN-IDYIRRRTAKRILIMIAVVWFVSLIISIAPLFG-WKDEDDLDRVlktgVCLISQDYGYTIFSTV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   217 GSFFAPCLIMGLVYARIYRVAKRrtrtlsEKRApvgpdgaspttenglgaaageARTgtarprpptwsrtraaqrprgga 296
Cdd:cd15331 168 GAFYVPLLLMIIIYWKIYQAAKR------ERKA---------------------ART----------------------- 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   297 pgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqare 376
Cdd:cd15331     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194   377 krftfvLAVVMGVFVLCWFPfFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15331 198 ------LAIITGAFVVCWLP-FFLVALVMPFCGAWQISRFLESFFLWLGYFNSLLNPIIYTIFSPDFRGAF 261
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
60-447 7.08e-58

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 191.37  E-value: 7.08e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15052   9 LLVIATIGGNILVCLAISLEKRLQNVTNYFLMSLAIADLLVGLLVMPLSILTELFGgVWPLPLVLCLLWVTLDVLFCTAS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP-PLVSLYRQPDGAAYPQCGLNDETwYILSSCIG 217
Cdd:cd15052  89 IMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPiPVLGIIDTTNVLNNGTCVLFNPN-FVIYGSIV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   218 SFFAPCLIMGLVYARIyrvakrrTRTLSekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggap 297
Cdd:cd15052 168 AFFIPLLIMVVTYALT-------IRLLS---------------------------------------------------- 188
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   298 gplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREK 377
Cdd:cd15052 189 -----------------------------------------------------------------------------NEQ 191
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194   378 RFTFVLAVVMGVFVLCWFPFFFIYSLYGICREA-CQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15052 192 KASKVLGIVFAVFVICWCPFFITNILTGLCEECnCRISPWLLSVFVWLGYVSSTINPIIYTIFNKTFRRAF 262
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
61-447 8.52e-57

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 188.72  E-value: 8.52e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15061   9 AIIFTIFGNLLVILAVATTRRLRTITNCYIVSLATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLDVLLCTASIL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYrQPDGAAYPQCGLNDETWYILSSCIGSFF 220
Cdd:cd15061  89 NLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLLITSPPLVGPS-WHGRRGLGSCYYTYDKGYRIYSSMGSFF 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   221 APCLIMGLVYARIYRVAkrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgpl 300
Cdd:cd15061 168 LPLLLMLFVYLRIFRVI--------------------------------------------------------------- 184
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   301 rrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRFT 380
Cdd:cd15061 185 -------------------------------------------------------------------------AKERKTA 191
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   381 FVLAVVMGVFVLCWFPFFFIYSLYGICreACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15061 192 KTLAIVVGCFIVCWLPFFIMYLIEPFC--DCQFSEALSTAFTWLGYFNSVINPFIYAFYNKDFRRAF 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
60-440 8.27e-55

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 184.03  E-value: 8.27e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd00637   7 LIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC----GLNDETWYILSSC 215
Cdd:cd00637  87 LTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCClcwpDLTLSKAYTIFLF 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   216 IGSFFAPCLIMGLVYARIYRVAKRRTRTLSekrapvgpdgaspttenglgaaageartgtarpRPPTWSRTRAAQRprgg 295
Cdd:cd00637 167 VLLFLLPLLVIIVCYVRIFRKLRRHRRRIR---------------------------------SSSSNSSRRRRRR---- 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   296 apgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaR 375
Cdd:cd00637 210 -------------------------------------------------------------------------------R 210
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   376 EKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFN 440
Cdd:cd00637 211 ERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFFN 275
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
65-447 1.59e-54

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 183.07  E-value: 1.59e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    65 TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCA 144
Cdd:cd15333  18 TTLSNAFVIATIYLTRKLHTPANYLIASLAVTDLLVSILVMPISIVYTVTGTWTLGQVVCDIWLSSDITCCTASILHLCV 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   145 ISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLvsLYRQPDG-AAYPQCGLN-DETWYILSSCIGSFFAP 222
Cdd:cd15333  98 IALDRYWAITDAVEYSKKRTPKRAAVMIALVWVISISISLPPF--FWRQAKAeEEVSECVVNtDHILYTVYSTVGAFYIP 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   223 CLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgplrr 302
Cdd:cd15333 176 TLLLIALYGRIYVEAR---------------------------------------------------------------- 191
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   303 ggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRFTFV 382
Cdd:cd15333 192 -----------------------------------------------------------------------ARERKATKT 200
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   383 LAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15333 201 LGIILGAFIVCWLPFFIISLVLPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAF 265
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
61-447 6.87e-53

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 179.95  E-value: 6.87e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15058  10 IILAIVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWCELWTSVDVLCVTASIE 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS-LYRQPDGAA-----YPQCG--LNDETWYIL 212
Cdd:cd15058  90 TLCVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWIVSALVSFVPIMNqWWRANDPEAndcyqDPTCCdfRTNMAYAIA 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   213 SSCIgSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGPDGASPTTEnglgaaageartgtarprpptwsrtraaqrp 292
Cdd:cd15058 170 SSVV-SFYIPLLIMIFVYARVFLIATRQLQLIDKRRLRFQSECPAPQTT------------------------------- 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   293 rggapgplrrggrrragaeggaggadgqgagpgaaqsgalTASRSPGPGGRLSRassrsvefflsrrrrarssvcrrkVA 372
Cdd:cd15058 218 ----------------------------------------SPEGKRSSGRRPSR------------------------LT 233
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   373 QAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREAcqVPGPLFKFFFWIGYCNSSLNPVIYtVFNQDFRPSF 447
Cdd:cd15058 234 VVKEHKALKTLGIIMGTFTLCWLPFFIANIINVFNRNL--PPGEVFLLLNWLGYINSGLNPIIY-CRSPEFRTAF 305
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
61-447 2.78e-52

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 177.09  E-value: 2.78e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15330  10 LILCAIFGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYPQ-CGLNDETWYILSSCIGSF 219
Cdd:cd15330  90 HLCAIALDRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFSISIPPMLG-WRTPEDRSDPDaCTISKDPGYTIYSTFGAF 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAkrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15330 169 YIPLILMLVLYGRIFKAA-------------------------------------------------------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRF 379
Cdd:cd15330 187 --------------------------------------------------------------------------ARERKT 192
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15330 193 VKTLGIIMGTFILCWLPFFIVALVLPFCESTCHMPELLGAIINWLGYSNSLLNPIIYAYFNKDFQSAF 260
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
60-447 9.36e-51

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 173.51  E-value: 9.36e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15055   9 SISLLTVLGNLLVIISISHFKQLHTPTNLLLLSLAVADFLVGLLVMPFSMIRSIETCWYFGDTFCKLHSSLDYILTSASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC-G----LNDETWYILSS 214
Cdd:cd15055  89 FNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDNLNQPGLIRYNSCyGecvvVVNFIWGVVDL 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   215 cIGSFFAPCLIMGLVYARIYRVAKRRTRTLsekrapvgpdgaspttenglgaaageartgtarprpptwsRTRAAQrprg 294
Cdd:cd15055 169 -VLTFILPCTVMIVLYMRIFVVARSQARAI----------------------------------------RSHTAQ---- 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   295 gapgplrrggrrragaeggaggadgqgagpgaaqsgaltaSRSPGPGGRLSRASSRsvefflsrrrrarssvcrrKVAQA 374
Cdd:cd15055 204 ----------------------------------------VSLEGSSKKVSKKSER-------------------KAAKT 224
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   375 rekrftfvLAVVMGVFVLCWFPfFFIYSLYGicrEACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15055 225 --------LGIVVGVFLLCWLP-YYIVSLVD---PYISTPSSVFDVLIWLGYFNSCLNPLIYALFYPWFRKAL 285
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
68-436 2.95e-50

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 171.33  E-value: 2.95e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194      68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVHLCAIS 146
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGdWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     147 LDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAAyPQCGLNDET------WYILSSCIGS 218
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLfgWTLTVPEGNV-TVCFIDFPEdlskpvSYTLLISVLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     219 FFAPCLIMGLVYARIYRVAKRRTRTLSEKRApvgpdgaspttenglgaaageartgtarprppTWSRTRAAQrprggapg 298
Cdd:pfam00001 160 FLLPLLVILVCYTLIIRTLRKSASKQKSSER--------------------------------TQRRRKALK-------- 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqarekr 378
Cdd:pfam00001     --------------------------------------------------------------------------------
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194     379 ftfVLAVVMGVFVLCWFPFFFIYSLYGICREaCQVPGPLFKFFF---WIGYCNSSLNPVIY 436
Cdd:pfam00001 200 ---TLAVVVVVFILCWLPYHIVNLLDSLALD-CELSRLLDKALSvtlWLAYVNSCLNPIIY 256
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
61-447 4.57e-49

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 168.44  E-value: 4.57e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15062  10 FILFAIGGNLLVILSVACNRHLRTPTHYFIVNLAVADLLLSFTVLPFSATLEVLGYWAFGRIFCDVWAAVDVLCCTASIM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYPQCGLNDETWYILSSCIGSFF 220
Cdd:cd15062  90 SLCVISVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISIGPLLG-WKEPAPADEQACGVNEEPGYVLFSSLGSFY 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   221 APCLIMGLVYARIYRVAKRRTRtlsEKRApvgpdgaspttenglgaaageARTgtarprpptwsrtraaqrprggapgpl 300
Cdd:cd15062 169 LPLAIILVMYCRVYVVAFKFSR---EKKA---------------------AKT--------------------------- 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   301 rrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqarekrft 380
Cdd:cd15062     --------------------------------------------------------------------------------
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   381 fvLAVVMGVFVLCWFPFFFIYSLYGICREaCQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15062 198 --LGIVVGAFVLCWFPFFVVLPLGSLFST-LKPPEPVFKVVFWLGYFNSCLNPIIYPCSSREFKRAF 261
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
61-447 1.97e-48

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 166.99  E-value: 1.97e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15326  10 FILFAIVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEILGYWVFGRIFCDIWAAVDVLCCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYPQCGLNDETWYILSSCIGSFF 220
Cdd:cd15326  90 SLCAISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISIGPLLG-WKEPAPPDDKVCEITEEPFYALFSSLGSFY 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   221 APCLIMGLVYARIYRVAKRRTRtlsEKRApvgpdgaspttenglgaaageARTgtarprpptwsrtraaqrprggapgpl 300
Cdd:cd15326 169 IPLIVILVMYCRVYIVALKFSR---EKKA---------------------AKT--------------------------- 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   301 rrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqarekrft 380
Cdd:cd15326     --------------------------------------------------------------------------------
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   381 fvLAVVMGVFVLCWFPFFFIYSLyGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15326 198 --LGIVVGMFILCWLPFFIALPL-GSLFSHLKPPETLFKIIFWLGYFNSCLNPIIYPCSSKEFKRAF 261
7tmA_D3_dopamine_R cd15310
D3 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
61-447 2.82e-47

D3 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320436 [Multi-domain]  Cd Length: 259  Bit Score: 163.60  E-value: 2.82e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15310  10 LILAIVFGNVLVCMAVLRERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGgVWNFSRICCDVFVTLDVMMCTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTP---RRVKATIVAVWLISAVISFPPLVSLYRQPDGAAypqCGLNDETWYILSSCI 216
Cdd:cd15310  90 LNLCAISIDRYTAVVMPVHYQHGTGQsscRRVSLMITAVWVLAFAVSCPLLFGFNTTGDPTV---CSISNPDFVIYSSVV 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   217 gSFFAPCLIMGLVYARIYrvakrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprgga 296
Cdd:cd15310 167 -SFYLPFGVTLLVYVRIY-------------------------------------------------------------- 183
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   297 pgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkVAQARE 376
Cdd:cd15310 184 --------------------------------------------------------------------------VVLLRE 189
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194   377 KRFTFVLAVVMGVFVLCWFPFFFIYSLYGICReACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15310 190 KKATQMLAIVLGAFIVCWLPFFLTHILNTHCQ-ACHVPPELYSATTWLGYVNSALNPVIYTTFNIEFRRAF 259
7tmA_5-HT1F cd15334
serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G ...
61-448 4.18e-47

serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320456 [Multi-domain]  Cd Length: 259  Bit Score: 163.20  E-value: 4.18e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15334  10 LALMTTAINSLVITAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIMYIVKETWIMGQVVCDIWLSVDITCCTCSIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLvsLYRQPDGAAYPQCGL-NDETWYILSSCIGSF 219
Cdd:cd15334  90 HLSAIALDRYRAITDAVEYARKRTPKHAGIMIAVVWIISIFISMPPL--FWRHQTTSREDECIIkHDHIVFTIYSTFGAF 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRVAkrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15334 168 YIPLALILILYYKIYRAA-------------------------------------------------------------- 185
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKRF 379
Cdd:cd15334 186 --------------------------------------------------------------------------TRERKA 191
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICrEACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSFK 448
Cdd:cd15334 192 ATTLGLILGAFVICWLPFFVKEVIVNTC-DSCYISEEMSNFLTWLGYINSLINPLIYTIFNEDFKKAFQ 259
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
61-447 9.70e-47

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 164.02  E-value: 9.70e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAP-QNLFLVSLASADILVATLVMPFSLANELMAYWYFGQvWCGVYLALDVLFCTSSI 139
Cdd:cd15320  11 LILSTLLGNTLVCAAVIRFRHLRSKvTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGS-FCNIWVAFDIMCSTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL-VSLYR-QPDGAAYPQCGLNDETW-------- 209
Cdd:cd15320  90 LNLCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISFIPVqLNWHKaKPTSFLDLNASLRDLTMdncdssln 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   210 --YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSE-KRAPVGPDGASPTTENGlgaaageartgtarprpptwsrt 286
Cdd:cd15320 170 rtYAISSSLISFYIPVAIMIVTYTRIYRIAQKQIRRISAlERAAVHAKNCQNSTGNR----------------------- 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   287 raaqrprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspGPGGRLSRASSRSVEFflsrrrrarssv 366
Cdd:cd15320 227 ----------------------------------------------------GSGDCQQPESSFKMSF------------ 242
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   367 crrkvaqAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICR----EACQVPGPLFKFFFWIGYCNSSLNPVIYTvFNQD 442
Cdd:cd15320 243 -------KRETKVLKTLSVIMGVFVCCWLPFFILNCMVPFCKptstEPFCISSTTFDVFVWFGWANSSLNPIIYA-FNAD 314

                ....*
gi 178194   443 FRPSF 447
Cdd:cd15320 315 FRKAF 319
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
60-447 2.75e-46

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 161.64  E-value: 2.75e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15314   9 LISLVTVCGNLLVIISIAHFKQLHTPTNYLILSLAVADLLVGGLVMPPSMVRSVETCWYFGDLFCKIHSSFDITLCTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFpPLVSLYRQPDGAAYPQCGLNDETWYILS------ 213
Cdd:cd15314  89 LNLCFISIDRYYAVCQPLLYRSKITVRVVLVMILISWSVSALVGF-GIIFLELNIKGIYYNHVACEGGCLVFFSkvssvv 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRTRTLsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrpr 293
Cdd:cd15314 168 GSVFSFYIPAVIMLCIYLKIFLVAQRQARSI------------------------------------------------- 198
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   294 ggapgplrrggrrragaeggaggadgqgagpgaaQSGALTASRSpgpggrlsrassrsvefflsrrrrarssvcrrkvAQ 373
Cdd:cd15314 199 ----------------------------------QSARTKSGAS----------------------------------SS 210
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 178194   374 AREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICReaCQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15314 211 KMERKATKTLAIVMGVFLLCWTPFFLCNIIDPFIN--YSIPPVLIEVLNWLGYSNSTLNPFIYAFFYSWFRKAF 282
7tmA_5-HT1E cd15335
serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G ...
61-447 3.59e-44

serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320457 [Multi-domain]  Cd Length: 258  Bit Score: 155.47  E-value: 3.59e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15335  10 ITILTTVLNSAVIAAICTTKKLHQPANYLICSLAVTDFLVAVLVMPLSITYIVMDTWTLGYFICEIWLSVDMTCCTCSIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLvsLYRQPDGAAYP-QCGL-NDETWYILSSCIGS 218
Cdd:cd15335  90 HLCVIALDRYWAITDAIEYARKRTAKRAGLMILTVWTISIFISIPPL--FWRNHHDANIPsQCIIqHDHVIYTIYSTFGA 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 FFAPCLIMGLVYARIYRVAkrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwSRTRAAQRprggapg 298
Cdd:cd15335 168 FYIPLTLILILYYRIYHAA----------------------------------------------SRERKAAR------- 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqarekr 378
Cdd:cd15335     --------------------------------------------------------------------------------
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   379 ftfVLAVVMGVFVLCWFPFFFIYSLYGIcrEACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15335 195 ---ILGLILGAFILSWLPFFIKELIVGL--SVMTVSPEVADFLTWLGYVNSLVNPLLYTSFNEDFKLAF 258
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
61-447 3.08e-43

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 154.18  E-value: 3.08e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15056  10 VILLTILGNLLVIVAVCTDRQLRKKTNYFVVSLAVADLLVAVLVMPFGAIELVNNRWIYGETFCLVRTSLDVLLTTASIM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVT-QAVEYnlKRTPRRVKATIVAVWLISAVISFPPL-----------VSLYRQPDGAAYpqCGLNDET 208
Cdd:cd15056  90 HLCCIALDRYYAICcQPLVY--KMTPLRVAVMLGGCWVIPTFISFLPImqgwnhigiedLIAFNCASGSTS--CVFMVNK 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   209 WYILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLsekrapvgpdgaspttenglgaaageartgtarprpptwsrtRA 288
Cdd:cd15056 166 PFAIICSTVAFYIPALLMVLAYYRIYVAAREQAHQI------------------------------------------RS 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   289 AQRprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgPGGRLSRASSRSVEFFlsrrrrarssvcr 368
Cdd:cd15056 204 LQR------------------------------------------------AGSSNHEADQHRNSRM------------- 222
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   369 rkvaqAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREacQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15056 223 -----RTETKAAKTLGIIMGCFCVCWAPFFVTNIVDPFIGY--RVPYLLWTAFLWLGYINSGLNPFLYAFFNKSFRRAF 294
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
60-447 2.15e-42

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 151.98  E-value: 2.15e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15959   9 LAILVIVGGNLLVIVAIAKTPRLQTMTNVFVTSLACADLVMGLLVVPPGATILLTGHWPLGTTVCELWTSVDVLCVTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQpDGA--------AYPQCG--LNDETW 209
Cdd:cd15959  89 ETLCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVWAISAAISFLPIMNQWWR-DGAdeeaqrcyDNPRCCdfVTNMPY 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   210 YILSSCIgSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGPDgaspttenglgaaageartgtarPRPPTWSRTRAA 289
Cdd:cd15959 168 AIVSSTV-SFYVPLLVMIFVYVRVFVVATRQVRLIRKDKVRFPPE-----------------------ESPPAESRPACG 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   290 QRPRGgapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrr 369
Cdd:cd15959 224 RRPSR--------------------------------------------------------------------------- 228
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   370 kVAQAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREAcqVPGPLFKFFFWIGYCNSSLNPVIYTVfNQDFRPSF 447
Cdd:cd15959 229 -LLAIKEHKALKTLGIIMGTFTLCWLPFFVANIIKVFCRSL--VPDPAFLFLNWLGYANSAFNPIIYCR-SPDFRSAF 302
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
61-447 2.69e-42

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 150.45  E-value: 2.69e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15327  10 FILMAIVGNILVILSVACNRHLQTVTNYFIVNLAIADLLLSTTVLPFSATLEVLGFWAFGRVFCDIWAAVDVLCCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYPQCGLNDETWYILSSCIGSFF 220
Cdd:cd15327  90 SLCVISVDRYVGVKHSLKYPTIMTERKAGVILVLLWVSSMVISIGPLLG-WKEPPPPDESICSITEEPGYALFSSLFSFY 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   221 APCLIMGLVYARIYRVAKRRTrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgpl 300
Cdd:cd15327 169 LPLMVILVMYFRVYVVALKFS----------------------------------------------------------- 189
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   301 rrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKRFT 380
Cdd:cd15327 190 --------------------------------------------------------------------------REKKAA 195
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   381 FVLAVVMGVFVLCWFPFFFIYSLyGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15327 196 KTLAIVVGVFILCWFPFFFVLPL-GSFFPALKPSEMVFKVIFWLGYFNSCVNPIIYPCSSKEFKRAF 261
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
61-447 9.02e-42

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 149.27  E-value: 9.02e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15325  10 FILFGVLGNILVILSVACHRHLQTVTHYFIVNLAVADLLLTSTVLPFSAIFEILGYWAFGRVFCNIWAAVDVLCCTASIM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlYRQPDGAAYPQCGLNDETWYILSSCIGSFF 220
Cdd:cd15325  90 SLCIISIDRYIGVSYPLRYPSIMTERRGLLALLCVWVLSLVISIGPLFG-WKEPAPEDETICQITEEPGYALFSALGSFY 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   221 APCLIMGLVYARIYRVAkrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapgpl 300
Cdd:cd15325 169 LPLAIILVMYCRVYVVA--------------------------------------------------------------- 185
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   301 rrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsVEFflsrrrrarssvcrrkvaqAREKRFT 380
Cdd:cd15325 186 ---------------------------------------------------LKF-------------------SREKKAA 195
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   381 FVLAVVMGVFVLCWFPFFFIYSLyGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15325 196 KTLGIVVGCFVLCWLPFFLVMPI-GSIFPAYKPSDTVFKITFWLGYFNSCINPIIYPCSSQEFKKAF 261
7tmA_D1B_dopamine_R cd15319
D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
60-447 1.23e-41

D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320442 [Multi-domain]  Cd Length: 317  Bit Score: 150.49  E-value: 1.23e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAP-QNLFLVSLASADILVATLVMPFSLANELMAYWYFGqVWCGVYLALDVLFCTSS 138
Cdd:cd15319   9 LLILWTLLGNILVCAAVVRFRHLRSKvTNIFIVSLAVSDLFVALLVMPWKAVAEVAGYWPFG-AFCDVWVAFDIMCSTAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDET---------- 208
Cdd:cd15319  88 ILNLCVISVDRYWAISSPFRYERKMTQRVALVMISVAWTLSVLISFIPVQLNWHKDSGDDWVGLHNSSISrqveencdss 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   209 ---WYILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSekrapvgpdgaspttenglgaaageartgtarprpptwSR 285
Cdd:cd15319 168 lnrTYAISSSLISFYIPVAIMIVTYTRIYRIAQIQIRRIS--------------------------------------SL 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   286 TRAAQRPRggapgplrrggrrragaeggaggadgqgagpgaaqsgaltASRSpgpgGRLSRASSRSVefflsrrrrarss 365
Cdd:cd15319 210 ERAAEHAQ----------------------------------------SCRS----NRIDCHHHTSL------------- 232
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   366 vcrrKVAQAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGIC-REACQVPGPL-------FKFFFWIGYCNSSLNPVIYT 437
Cdd:cd15319 233 ----RTSIKKETKVLKTLSVIMGVFVCCWLPFFILNCMVPFCdRPPADPDAGLpcvsettFDVFVWFGWANSSLNPIIYA 308
                       410
                ....*....|
gi 178194   438 vFNQDFRPSF 447
Cdd:cd15319 309 -FNADFRKVF 317
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
60-245 5.30e-41

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 147.08  E-value: 5.30e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15049   9 SLSLVTVGGNILVILSFRVNRQLRTVNNYFLLSLACADLIIGLVSMNLYTVYLVMGYWPLGPLLCDLWLALDYVASNASV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP-----PLVSLYRQ-PDGAAYPQcgLNDETWYILS 213
Cdd:cd15049  89 MNLLLISFDRYFSVTRPLTYRAKRTPKRAILMIALAWVISFVLWAPailgwQYFVGERTvPDGQCYIQ--FLDDPAITFG 166
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRR---TRTLS 245
Cdd:cd15049 167 TAIAAFYLPVLVMTILYWRIYRETARErkaARTLS 201
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
62-447 7.60e-41

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 147.50  E-value: 7.60e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15312  11 ILLTVFGNLMVIISISHFKQLHSPTNFLILSLAITDFLLGFLVMPYSMVRSVESCWYFGDLFCKIHSSLDMMLSTTSIFH 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS-LYRqpDGAaypqcglndETWYILSSCIGS-- 218
Cdd:cd15312  91 LCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFAFGVVFSeVNL--EGI---------EDYVALVSCTGScv 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 ---------------FFAPCLIMGLVYARIYRVAKRRTRTLSEkrapvgpdgaspTTENGLGAAageartgtarprpptw 283
Cdd:cd15312 160 lifnklwgviasliaFFIPGTVMIGIYIKIFFVARKHAKVINN------------RPSVTKGDS---------------- 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   284 srtraaqrprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrar 363
Cdd:cd15312     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   364 ssvcRRKVAQAREKRFTFVLAVVMGVFVLCWFPFFFI--------YSlygicreacqVPGPLFKFFFWIGYCNSSLNPVI 435
Cdd:cd15312 212 ----KNKLSKKKERKAAKTLSIVMGVFLLCWLPFFVAtlidpflnFS----------TPVDLFDALVWLGYFNSTCNPLI 277
                       410
                ....*....|..
gi 178194   436 YTVFNQDFRPSF 447
Cdd:cd15312 278 YGFFYPWFQKAF 289
7tmA_Histamine_H3R_H4R cd15048
histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G ...
61-447 1.35e-40

histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H4R, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320176 [Multi-domain]  Cd Length: 296  Bit Score: 147.07  E-value: 1.35e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15048  10 LILVTVIGNLLVILAFIKDKKLRTVSNFFLLNLAVADFLVGLVSMPFYIPYTLTGKWPFGKVFCKAWLVVDYTLCTASAL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLIS------AVISFPPLVSLYRQPDGAAYPqcGLNDETWYILSS 214
Cdd:cd15048  90 TIVLISLDRYLSVTKAVKYRAKQTKRRTVLLMALVWILAfllygpAIIGWDLWTGYSIVPTGDCEV--EFFDHFYFTFIT 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGPDGASPTtenglgaaageartgTARPRPPTWSRtraaqrprg 294
Cdd:cd15048 168 SVLEFFIPFISVSFFNLLIYLNIRKRSRRRPLRSVPILPASQNPS---------------RARSQREQVKL--------- 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   295 gapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqA 374
Cdd:cd15048 224 -------------------------------------------------------------------------------R 224
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   375 REKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREACqVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15048 225 RDRKAAKSLAILVLVFLICWAPYTILTIIRSFCSGSC-VDSYLYEFTFWLLWTNSAINPFLYAACHPRFRKAF 296
7tmA_5-HT5 cd15328
serotonin receptor subtype 5, member of the class A family of seven-transmembrane G ...
60-447 1.37e-40

serotonin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; 5-HT5 receptor, one of 14 mammalian 5-HT receptors, is activated by the neurotransmitter and peripheral signal mediator serotonin (also known as 5-hydroxytryptamine or 5-HT). The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/0) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320451 [Multi-domain]  Cd Length: 259  Bit Score: 145.86  E-value: 1.37e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRAL-RAPQNLfLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15328   9 MLVVATFLWNLLVLVTILRVRTFhRVPHNL-VASMAVSDVLVAALVMPLSLVHELSGRrWQLGRSLCQVWISFDVLCCTA 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLkRTPRRVKATIVAV-WLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCI 216
Cdd:cd15328  88 SIWNVTAIALDRYWSITRHLEYTL-RTRRRISNVMIALtWALSAVISLAPLLFGWGETYSEDSEECQVSQEPSYTVFSTF 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   217 GSFFAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprgga 296
Cdd:cd15328 167 GAFYLPLCVVLFVYWKIYKAAQ---------------------------------------------------------- 188
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   297 pgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaRE 376
Cdd:cd15328 189 ------------------------------------------------------------------------------KE 190
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 178194   377 KRFTFVLAVVMGVFVLCWFPFFFIYSLYGICreACQVPgPLFK-FFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15328 191 KRAALMVGILIGVFVLCWIPFFLTELISPLC--SCDIP-PIWKsIFLWLGYSNSFFNPLIYTAFNKNYNNAF 259
7tmA_Beta1_AR cd15958
beta-1 adrenergic receptors (adrenoceptors), member of the class A family of ...
61-447 1.09e-39

beta-1 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-1 adrenergic receptor (beta-1 adrenoceptor), also known as beta-1 AR, is activated by adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320624 [Multi-domain]  Cd Length: 298  Bit Score: 144.66  E-value: 1.09e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15958  10 IVLLIVAGNVLVIVAIGRTQRLQTLTNLFITSLACADLVMGLLVVPFGATLVVRGRWLYGSFFCELWTSVDVLCVTASIE 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF-PPLVSLYRQPDGAAY-----PQ-CGLNDETWYILS 213
Cdd:cd15958  90 TLCVIAIDRYLAITSPFRYQSLLTRARAKGIVCTVWAISALVSFlPIMMHWWRDEDDQALkcyedPGcCDFVTNRAYAIA 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRTRTL--SEKRAPVGPdgaspttenglgaaAGEARTGTARPRpptwsrtraaqr 291
Cdd:cd15958 170 SSIISFYIPLLIMIFVYLRVYREAKKQIKKIdkCEGRFHNTL--------------TGLGRKCKRRPS------------ 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   292 prggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrKV 371
Cdd:cd15958 224 ------------------------------------------------------------------------------RI 225
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   372 AQAREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREAcqVPGPLFKFFFWIGYCNSSLNPVIYTVfNQDFRPSF 447
Cdd:cd15958 226 LALREQKALKTLGIIMGVFTLCWLPFFLVNVVNVFNREL--VPDWLFVFFNWLGYANSAFNPIIYCR-SPDFRKAF 298
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
61-451 1.95e-38

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 140.81  E-value: 1.95e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15305  10 IIILTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAILYDYaWPLPRYLCPIWISLDVLFSTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNlkRTPRRVKA--TIVAVWLISAVISFP-PLVSLYRQPDGAAYPQCGLNDETWYILSSCI 216
Cdd:cd15305  90 MHLCAISLDRYVAIRNPIEHS--RFNSRTKAmmKIAAVWTISIGISMPiPVIGLQDDEKVFVNGTCVLNDENFVLIGSFV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   217 gSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRApvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprgga 296
Cdd:cd15305 168 -AFFIPLIIMVITYCLTIQVLQRQQAINNERRA----------------------------------------------- 199
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   297 pgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqare 376
Cdd:cd15305     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   377 krfTFVLAVVMGVFVLCWFPFFFIYSLYGICREAC--QVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSFKHIL 451
Cdd:cd15305 200 ---SKVLGIVFFLFLIMWCPFFITNILSVLCKEACdqKLMEELLNVFVWVGYVSSGINPLVYTLFNKTYRRAFSNYI 273
7tmA_D4_dopamine_R cd15308
D4 dopamine receptor of the D2-like family, member of the class A family of ...
61-447 1.26e-37

D4 dopamine receptor of the D2-like family, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320434 [Multi-domain]  Cd Length: 258  Bit Score: 138.05  E-value: 1.26e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15308  10 LILAIIAGNVLVCLSVCTERALKTTTNYFIVSLAVADLLLALLVLPLYVYSEFQGgVWTLSPVLCDALMTMDVMLCTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYpQCGLNDETwYILSSCIGSF 219
Cdd:cd15308  90 FNLCAISVDRFIAVSVPLNYNRRQGSVRQLLLISATWILSFAVASPVIFGLNNVPNRDPA-VCKLEDNN-YVVYSSVCSF 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   220 FAPCLIMGLVYARIYRvakrrtrtlsekrapvgpdgaspttenGLGaaageartgtarprpptwsrtraaqrprggapgp 299
Cdd:cd15308 168 FIPCPVMLVLYCAMFR---------------------------GLG---------------------------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   300 lrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKRF 379
Cdd:cd15308 187 ---------------------------------------------------------------------------RERKA 191
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   380 TFVLAVVMGVFVLCWFPFFFIYSLYGICrEACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15308 192 MRVLPVVVGAFLFCWTPFFVVHITRALC-ESCSIPPQLISIVTWLGYVNSALNPVIYTVFNAEFRNVF 258
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
60-447 1.42e-37

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 138.73  E-value: 1.42e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15317   9 LAMLITVSGNLVVIISISHFKQLHSPTNMLVLSLATADFLLGLCVMPFSMIRTVETCWYFGDLFCKFHTGLDLLLCTTSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLY---RQPDGAAYPQCG-----LNDETWYI 211
Cdd:cd15317  89 FHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWLVPGIYTFGLIYTGAndeGLEEYSSEISCVggcqlLFNKIWVL 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   212 LSSCIgsFFAPCLIMGLVYARIYRVAKRRTRTLSEKrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqr 291
Cdd:cd15317 169 LDFLT--FFIPCLIMIGLYAKIFLVARRQARKIQNM-------------------------------------------- 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   292 prggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpgGRLSRASSRSvefflsrrrrarssvcRRKV 371
Cdd:cd15317 203 --------------------------------------------------EDKFRSSEEN----------------SSKA 216
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   372 AQAREKRFTFVLAVVMGVFVLCWFPFF---FIYSLYGICREACqvpgpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15317 217 SASRERKAAKTLAIVMGIFLFCWLPYFidtIVDEYSNFITPAI-----VFDAVIWLGYFNSAFNPFIYAFFYPWFRKAF 290
7tmA_D2_dopamine_R cd15309
D2 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
60-447 7.17e-36

D2 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320435 [Multi-domain]  Cd Length: 254  Bit Score: 133.24  E-value: 7.17e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15309   9 LLIFVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWRFSRIHCDIFVTLDVMMCTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLK-RTPRRVKATIVAVWLISAVISFPPLVSLyrqpDGAAYPQCGLNDETWYILSSCIgS 218
Cdd:cd15309  89 LNLCAISIDRYTAVAMPMLYNTRySSKRRVTVMISVVWVLSFAISCPLLFGL----NNTDQNECIIANPAFVVYSSIV-S 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 FFAPCLIMGLVYARIYRVAKrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprggapg 298
Cdd:cd15309 164 FYVPFIVTLLVYVQIYIVLQ------------------------------------------------------------ 183
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqaREKR 378
Cdd:cd15309 184 ----------------------------------------------------------------------------KEKK 187
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   379 FTFVLAVVMGVFVLCWFPFFFIYSLYGICreACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15309 188 ATQMLAIVLGVFIICWLPFFITHILNMHC--DCNIPPALYSAFTWLGYVNSAVNPIIYTTFNIEFRKAF 254
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
61-447 7.83e-36

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 133.52  E-value: 7.83e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15304  10 VIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYrWPLPSKLCAVWIYLDVLFSTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP-PLVSLyrQPDGAAYPQ--CGLNDETWYILSSCI 216
Cdd:cd15304  90 MHLCAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISMPiPVFGL--QDDSKVFKEgsCLLADENFVLIGSFV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   217 gSFFAPCLIMGLVYARIYRvakrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprgga 296
Cdd:cd15304 168 -AFFIPLTIMVITYFLTIK------------------------------------------------------------- 185
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   297 pgplrrggrrragaeggaggadgqgagpgaaqsgALTASRSpgpggrlsrassrsvefflsrrrrarssvcrrkvaqaRE 376
Cdd:cd15304 186 ----------------------------------SLQQSIS-------------------------------------NE 194
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   377 KRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREAC--QVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15304 195 QKASKVLGIVFFLFVVMWCPFFITNVMAVICKESCneVVIGGLLNVFVWIGYLSSAVNPLVYTLFNKTYRSAF 267
7tmA_Beta2_AR cd15957
beta-2 adrenergic receptors (adrenoceptors), member of the class A family of ...
61-447 1.43e-35

beta-2 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; Beta-2 AR is activated by adrenaline that plays important roles in cardiac function and pulmonary physiology. While beta-1 AR and beta-2 AR are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway, beta-2 AR can couple to both G(s) and G(i) proteins in the heart. Moreover, beta-2 AR activation leads to smooth muscle relaxation and bronchodilation in the lung. The beta adrenergic receptors are a subfamily of the class A rhodopsin-like G protein-coupled receptors.


Pssm-ID: 341355 [Multi-domain]  Cd Length: 301  Bit Score: 133.84  E-value: 1.43e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVV-GNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15957   9 LIVLAIVfGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILLKTWTFGNFWCEFWTSIDVLCVTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL-VSLYRQPDGAA---YPQ---CGLNDETWYIL 212
Cdd:cd15957  89 ETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIqMHWYRATHQEAincYAEetcCDFFTNQAYAI 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrp 292
Cdd:cd15957 169 ASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSE-------------------------------------------- 204
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   293 rggapgplrrggrrragaeggaggadgqgagpgaaqsGALTASRSPGPGGRLSRASSRSVEFFLsrrrrarssvcrrkva 372
Cdd:cd15957 205 -------------------------------------GRFHNQNIDQNGSGGGGGNRRRSKFCL---------------- 231
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   373 qaREKRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREAcqVPGPLFKFFFWIGYCNSSLNPVIYTVfNQDFRPSF 447
Cdd:cd15957 232 --KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNL--IRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAF 301
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
60-447 2.90e-35

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 131.85  E-value: 2.90e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15054   9 LIILLTVAGNSLLILLIFTQRSLRNTSNYFLVSLFMSDLMVGLVVMPPAMLNALYGRWVLARDFCPIWYAFDVMCCSASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL----------VSLYRQPDGAAYPQCGLNDETW 209
Cdd:cd15054  89 LNLCVISLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALASFLPIelgwhelgheRTLPNLTSGTVEGQCRLLVSLP 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   210 YILSSCIGSFFAPCLIMGLVYARIYRVAKRrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraa 289
Cdd:cd15054 169 YALVASCLTFFLPSGAICFTYCRILLAARK-------------------------------------------------- 198
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   290 qrprggapgplrrggrrragaeggaggadgqgagpgaaqsgALTASRSpgpggrlsrassrsvefflsrrrrarssvcrr 369
Cdd:cd15054 199 -----------------------------------------ALKASLT-------------------------------- 205
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   370 kvaqarekrftfvLAVVMGVFVLCWFPFFFIYSLYGICReaCqVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15054 206 -------------LGILLGMFFVTWLPFFVANVVQAVCD--C-VSPGLFDVLTWLGYCNSTMNPIIYPLFMRDFKRAL 267
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
60-447 2.61e-34

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 130.03  E-value: 2.61e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFT--VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd14993   7 YVVVFLlaLVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQGVSVSA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYP------QC-----GLND 206
Cdd:cd14993  87 SVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEIISSEPgtitiyICtedwpSPEL 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   207 ETWYILSSCIGSFFAPCLIMGLVYARIyrvakrrTRTLsekrapvgpdgaspttenglgaaageartgtarprpptWSRT 286
Cdd:cd14993 167 RKAYNVALFVVLYVLPLLIISVAYSLI-------GRRL--------------------------------------WRRK 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   287 RaaqrprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrsPGPGGRLSRASSRsvefflsrrrrarssv 366
Cdd:cd14993 202 P--------------------------------------------------PGDRGSANSTSSR---------------- 215
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   367 crrKVAQAReKRFTFVLAVVMGVFVLCWFPFF--FIYSLYGIcrEACQVPGPLFK----FFFWIGYCNSSLNPVIYTVFN 440
Cdd:cd14993 216 ---RILRSK-KKVARMLIVVVVLFALSWLPYYvlSILLDFGP--LSSEESDENFLlilpFAQLLGYSNSAINPIIYCFMS 289

                ....*..
gi 178194   441 QDFRPSF 447
Cdd:cd14993 290 KKFRRGF 296
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
61-451 2.03e-33

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 127.38  E-value: 2.03e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15307  10 LVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDVLFCTASIM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPplVSLYRQPDGAAY---PQCGLNDETWYILSSCIg 217
Cdd:cd15307  90 HLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLP--LSLMYSKDHASVlvnGTCQIPDPVYKLVGSIV- 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   218 SFFAPCLIMGLVYARIYR-VAKRRTRTlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaqrprgga 296
Cdd:cd15307 167 CFYIPLGVMLLTYCLTVRlLARQRSRH----------------------------------------------------- 193
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   297 pgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpgGRLSRAssrsvefflsrrrrarssvcrrkvaqarE 376
Cdd:cd15307 194 ---------------------------------------------GRIIRL----------------------------E 200
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   377 KRFTFVLAVVMGVFVLCWFPFFFIYSLYGICREACQ-VPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSFKHIL 451
Cdd:cd15307 201 QKATKVLGVVFFTFVILWSPFFVLNLLPTVCAECEErISHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVL 276
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
61-249 6.83e-33

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 125.71  E-value: 6.83e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELM-AYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15306  10 VIIPTIGGNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTILFeAMWPLPLVLCPIWLFLDVLFSTASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP-PLVSLYRQPDGAAYPQCGLNDETW--YILSSCI 216
Cdd:cd15306  90 MHLCAISLDRYIAIKKPIQASQYNSRATAFIKITVVWLISIGIAIPvPIKGIETDVDNPNNITCVLTKERFgdFILFGSL 169
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   217 GSFFAPCLIMGLVYARIYRVAKRRTRTlSEKRA 249
Cdd:cd15306 170 AAFFTPLAIMIVTYFLTIHALRKQTIT-NEQRA 201
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
60-447 1.84e-32

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 124.08  E-value: 1.84e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15050   9 TISLITVILNLLVLYAVRTERKLHTVGNLYIVSLSVADLIVGAVVMPLNIVYLLESKWILGRPVCLFWLSMDYVASTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL---VSLYRQPDGAAYPQCG--LNDETWYILSS 214
Cdd:cd15050  89 FSLFILCIDRYRSVQQPLKYLKYRTKTRASLMISGAWLLSFLWVIPILgwhHFARGGERVVLEDKCEtdFHDVTWFKVLT 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVAKRrtrtlsEKRApvgpdgaspttenglgaaageartgtarprpptwsrtrAAQrprg 294
Cdd:cd15050 169 AILNFYIPSLLMLWFYAKIFKAVNR------ERKA--------------------------------------AKQ---- 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   295 gapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqa 374
Cdd:cd15050     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   375 rekrftfvLAVVMGVFVLCWFPFFFIYSLYGICREACqvPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15050 201 --------LGFIMAAFILCWIPYFILFMVIAFCKNCC--NENLHMFTIWLGYINSTLNPFIYPLCNENFKKTF 263
7tmA_TAAR6_8_9 cd15316
trace amine-associated receptors 6, 8, and 9, member of the class A family of ...
60-244 9.66e-30

trace amine-associated receptors 6, 8, and 9, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320439 [Multi-domain]  Cd Length: 290  Bit Score: 117.27  E-value: 9.66e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15316   9 FGAVLAVFGNLLVMISILHFKQLHSPTNFLIASLACADFLVGVTVMPFSTVRSVESCWYFGESFCTFHTCCDVSFCYASL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFpPLVSLYRQPDGAAYPQCGLN---------DETWY 210
Cdd:cd15316  89 FHLCFISVDRYIAVTDPLVYPTKFTVSVSGICISVSWIFSLTYSF-SVFYTGVNDDGLEELVNALNcvggcqiilNQNWV 167
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   211 ILSSCigSFFAPCLIMGLVYARIYRVAKRRTRTL 244
Cdd:cd15316 168 LVDFL--LFFIPTFAMIILYGKIFLVAKQQARKI 199
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
63-242 1.69e-29

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 116.59  E-value: 1.69e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLA--NELMAYWYFgqvwCGVYLALDVLFCTSSIV 140
Cdd:cd14968  12 VLSVLGNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIPLAILisLGLPTNFHG----CLFMACLVLVLTQSSIF 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAA-----YPQCGLN---DETWYIL 212
Cdd:cd14968  88 SLLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMFGWNNGAPLESgcgegGIQCLFEeviPMDYMVY 167
                       170       180       190
                ....*....|....*....|....*....|
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd14968 168 FNFFACVLVPLLIMLVIYLRIFRVIRKQLR 197
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
61-245 2.24e-29

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 115.84  E-value: 2.24e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd17790  10 LSLVTVTGNLLVLISFKVNSELKTVNNYFLLSLACADLIIGAFSMNLYTTYILMGHWALGTVACDLWLALDYVASNASVM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPP------LVSLYRQPDGAAYPQcgLNDETWYILSS 214
Cdd:cd17790  90 NLLIISFDRYFSITRPLTYRAKRTPRRAAIMIGLAWLISFVLWAPAilfwqyLVGERTVLAGQCYIQ--FLSQPIITFGT 167
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVA---KRRTRTLS 245
Cdd:cd17790 168 AIAAFYLPVTIMIILYWRIYRETikeKKAARTLS 201
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
60-248 2.34e-29

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 116.55  E-value: 2.34e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCgvYLALdVLFCTS-- 137
Cdd:cd15203   9 LIIVLGVVGNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLPFTLIYTLTKNWPFGSILC--KLVP-SLQGVSif 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 -SIVHLCAISLDRYwsvtQAVEYNLKR--TPRRVKATIVAVWLISAVISFP-----PLVSLYRQPDGAAYPQCglnDETW 209
Cdd:cd15203  86 vSTLTLTAIAIDRY----QLIVYPTRPrmSKRHALLIIALIWILSLLLSLPlaifqELSDVPIEILPYCGYFC---TESW 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 178194   210 --------YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKR 248
Cdd:cd15203 159 pssssrliYTISVLVLQFVIPLLIISFCYFRISLKLRKRVKKKRGKR 205
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
60-248 4.86e-29

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 115.38  E-value: 4.86e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd14969   9 LIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFLGLVSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNlKRTPRRVKATIVAVWLISAVISFPPLV---SLYRQPDGAAypqCGLN--DETW----Y 210
Cdd:cd14969  89 STLAALAFERYLVIVRPLKAF-RLSKRRALILIAFIWLYGLFWALPPLFgwsSYVPEGGGTS---CSVDwySKDPnslsY 164
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKR 248
Cdd:cd14969 165 IVSLFVFCFFLPLAIIIFCYYKIYRTLRKMSKRAARRK 202
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
62-245 1.07e-28

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 114.19  E-value: 1.07e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15318  11 MLIIVLGNLFVVVTVSHFKALHTPTNFLLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDTLFCLTSIFH 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISfppLVSLYRQPDGAAYPQcglndetWYILSSCIGS--- 218
Cdd:cd15318  91 LCFISIDRHCAICDPLLYPSKFTIRVACIFIAAGWLVPTVYT---SVFLYTKAVEEGLAE-------LLTSVPCVGScql 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 178194   219 -------------FFAPCLIMGLVYARIYRVAKRRTRTLS 245
Cdd:cd15318 161 lynklwgwlnfpvFFIPCLIMIGLYVKIFIVAKRQARAIA 200
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
60-249 3.03e-27

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 109.91  E-value: 3.03e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15301   9 VLSLVTVGGNVMVMISFKIDKQLQTISNYFLFSLAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAIDYLASNASV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAV------ISFPPLVSLYRQPDGAAYPQCgLNDETWYILS 213
Cdd:cd15301  89 LNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAWIISLLlwppwiYSWPYIEGKRTVPAGTCYIQF-LETNPYVTFG 167
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15301 168 TALAAFYVPVTIMCILYWRIWRETKKRQKKQESKAA 203
7tmA_mAChR_M5 cd15300
muscarinic acetylcholine receptor subtype M5, member of the class A family of ...
65-249 1.08e-25

muscarinic acetylcholine receptor subtype M5, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. M5 mAChR is primarily found in the central nervous system and mediates acetylcholine-induced dilation of cerebral blood vessels. Activation of M5 receptor triggers a variety of cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides, and modulation of potassium channels. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320427 [Multi-domain]  Cd Length: 262  Bit Score: 105.49  E-value: 1.08e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    65 TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCA 144
Cdd:cd15300  14 TIVGNVLVMISFKVNSQLKTVNNYYLLSLACADLIIGIFSMNLYTSYILMGYWALGSLACDLWLALDYVASNASVMNLLV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   145 ISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYP--QCGLN--DETWYILSSCIGSFF 220
Cdd:cd15300  94 ISFDRYFSITRPLTYRAKRTPKRAGIMIGLAWLISFILWAPPILCWQYFVGKRTVPerECQIQflSEPTITFGTAIAAFY 173
                       170       180
                ....*....|....*....|....*....
gi 178194   221 APCLIMGLVYARIYRvakrrtRTLSEKRA 249
Cdd:cd15300 174 IPVSVMTILYCRIYK------ETIKERKA 196
7tmA_mAChR_M2 cd15297
muscarinic acetylcholine receptor subtype M2, member of the class A family of ...
61-244 1.80e-25

muscarinic acetylcholine receptor subtype M2, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of M2 receptor causes a decrease in cAMP production, generally leading to inhibitory-type effects. This causes an outward current of potassium in the heart, resulting in a decreased heart rate. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320424 [Multi-domain]  Cd Length: 262  Bit Score: 105.05  E-value: 1.80e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15297  10 LSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPP------LVSLYRQPDGAAYPQCGLNDETWYilSS 214
Cdd:cd15297  90 NLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAilfwqfIVGGRTVPEGECYIQFFSNAAVTF--GT 167
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVAKRR---TRTL 244
Cdd:cd15297 168 AIAAFYLPVIIMTVLYWQISRASSREkkvTRTI 200
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
60-241 2.35e-25

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 105.01  E-value: 2.35e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15207   7 YSLIFllCVVGNVLVCLVVAKNPRMRTVTNYFILNLAVSDLLVGVFCMPFTLVDNILTGWPFGDVMCKLSPLVQGVSVAA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYnlKRTPRRVKATIVAVWLISAVISFPPLVSL----YRQPDGAAYPQCglnDETW---- 209
Cdd:cd15207  87 SVFTLVAIAVDRYRAVVHPTEP--KLTNRQAFVIIVAIWVLALAIMIPQALVLevkeYQFFRGQTVHIC---VEFWpsde 161
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   210 ----YILSSCIGSFFAPCLIMGLVYARI-YRVAKRRT 241
Cdd:cd15207 162 yrkaYTTSLFVLCYVAPLLIIAVLYVRIgYRLWFKPV 198
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
60-249 2.59e-25

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 104.64  E-value: 2.59e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15299  12 ILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASV 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL------VSLYRQPDGAAYPQcgLNDETWYILS 213
Cdd:cd15299  92 MNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAIlfwqyfVGKRTVPPDECFIQ--FLSEPIITFG 169
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRvakrrtRTLSEKRA 249
Cdd:cd15299 170 TAIAAFYLPVTIMTILYWRIYK------ETIKEKKA 199
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
60-447 2.89e-25

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 104.68  E-value: 2.89e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd14970   9 VVCVVGLTGNSLVIYVILRYSKMKTVTNIYILNLAVADELF-LLGLPFLATSYLLGYWPFGEVMCKIVLSVDAYNMFTSI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAayPQCGLN-------DETWY 210
Cdd:cd14970  88 FCLTVMSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPVIIfaRTLQEEGGT--ISCNLQwpdppdyWGRVF 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRvakrrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtraaq 290
Cdd:cd14970 166 TIYTFVLGFAVPLLVITVCYSLIIR------------------------------------------------------- 190
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   291 rprggapgplrrggrrragaeggaggadgqgagpgaaqsgALTASRSPGPGGRlsrassrsvefflsrrrrarssvcrrK 370
Cdd:cd14970 191 ----------------------------------------RLRSSRNLSTSGA--------------------------R 204
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   371 VAQAREKRFTFVLAVVMGVFVLCWFPF--FFIYSLYGICREACQVPGpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd14970 205 EKRRARRKVTRLVLVVVAVFVVCWLPFhvFQIVRLLIDPPETLTVVG-VFLFCIALSYANSCLNPILYAFLDENFRKSF 282
7tmA_mAChR_GAR-2-like cd15302
muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of ...
60-447 1.47e-24

muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320429 [Multi-domain]  Cd Length: 266  Bit Score: 102.51  E-value: 1.47e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15302   9 ILSIITVIGNILVLLSFYVDRNIRQPSNYFIASLAVSDLLIGLESMPFYTVYVLNGdYWPLGWVLCDLWLSVDYTVCLVS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFpplVSLY----------RQPDGAAYPQcgLNDET 208
Cdd:cd15302  89 IYTVLLITIDRYCSVKIPAKYRNWRTPRKVLLIIAITWIIPALLFF---ISIFgwqyftgqgrSLPEGECYVQ--FMTDP 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   209 WYILSSCIGSFFAPCLIMGLVYARIYRVAKRrtrtlsekrapvgpdgaspttenglgaaageartgtarprpptwsrtra 288
Cdd:cd15302 164 YFNMGMYIGYYWTTLIVMLILYAGIYRAANR------------------------------------------------- 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   289 aqrprggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlSRASSRSVEFflsrrrrarssvcr 368
Cdd:cd15302 195 --------------------------------------------------------ARKALRTITF-------------- 204
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   369 rkvaqarekrftfvlavVMGVFVLCWFPFFFIYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15302 205 -----------------ILGAFVICWTPYHILATIYGFCEAPPCVNETLYTISYYLCYMNSPINPFCYALANQQFKKTF 266
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
60-241 1.87e-24

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 102.85  E-value: 1.87e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15208   7 YILVFIVglVGNVLVCFAVWRNHHMRTVTNYFIVNLSLADFLVIIICLPATLLVDVTETWFFGQVLCKIIPYLQTVSVSV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYnlKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGL---NDETW----- 209
Cdd:cd15208  87 SVLTLSCIALDRWYAICHPLMF--KSTAKRARVSILIIWIVSLLIMIPQAIVMECSRVVPLANKTILltvCDERWsdsiy 164
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   210 ---YILSSCIGSFFAPCLIMGLVYARIYRVAKRRT 241
Cdd:cd15208 165 qkvYHICFFLVTYLLPLCLMILAYFQIFRKLWCRQ 199
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
61-447 4.97e-24

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 101.30  E-value: 4.97e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRA-PQNLFLVSLASADILVAtLVMPFSLANELMAYWYFGQ-VWCGVYLALDVLFCTSS 138
Cdd:cd15104   9 LSPLIITGNLLVIVALLKLIRKKDtKSNCFLLNLAIADFLVG-LAIPGLATDELLSDGENTQkVLCLLRMCFVITSCAAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLyrQPDGAAYP-QCGL----NDETWYILS 213
Cdd:cd15104  88 VLSLAAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIGFLPLISP--QFQQTSYKgKCSFfaafHPRVLLVLS 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   214 SCIgsFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGPdgaspttenglgaaageartgtARPRPPTWSRTRAAQrpr 293
Cdd:cd15104 166 CMV--FFPALLLFVFCYCDILKIARVHSRAIYKVEHALAR----------------------QIHPRRTLSDFKAAR--- 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   294 ggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaq 373
Cdd:cd15104     --------------------------------------------------------------------------------
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 178194   374 arekrftfVLAVVMGVFVLCWFPFFFIYSLYGICREaCQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15104 219 --------TVAVLIGCFLLSWLPFQITGLVQALCDE-CKLYDVLEDYLWLLGLCNSLLNPWIYAFWQKEVRRAL 283
7tmA_Histamine_H3R cd15296
histamine receptor subtypes H3R and H3R-like, member of the class A family of ...
61-248 9.91e-23

histamine receptor subtypes H3R and H3R-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H3R-like, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320423 [Multi-domain]  Cd Length: 271  Bit Score: 97.17  E-value: 9.91e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15296  10 LVVATVLGNALVILAFVVDSSLRTQGNFFFLNLAISDFLVGGFCIPLYIPYVLTGRWKFGRGLCKLWLVVDYLLCTASVF 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKR-TPRRVKATIVAVWLIS------AVISFPPLVSLYRQPDGAAYPQCGLNdetWYIL- 212
Cdd:cd15296  90 NIVLISYDRFLSVTRAVSYRAQKgMTRQAVLKMVLVWVLAfllygpAIISWEYIAGGSIIPEGECYAEFFYN---WYFLm 166
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   213 SSCIGSFFAPCLIMGLVYARIY-RVAKRRTRTLSEKR 248
Cdd:cd15296 167 TASTLEFFTPFISVTYFNLSIYlNIQKRRFRLSRDKK 203
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
60-235 3.45e-22

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 95.51  E-value: 3.45e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15213   9 LMIFVGFLGNSIVCLIVYQKPAMRSAINLLLANLAFSDIMLSLVCMPFAAVTIITGRWIFGDIFCRISAMLYWFFVLEGV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEynlKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAayPQCGLN------DETWYI 211
Cdd:cd15213  89 AILLIISVDRYLIIVQRQD---KLNPHRAKILIAVSWVLSFCVSFPPLVgwGKYEFPPRA--PQCVLGytespaDRIYVV 163
                       170       180
                ....*....|....*....|....
gi 178194   212 LSSCIgSFFAPCLIMGLVYARIYR 235
Cdd:cd15213 164 LLLVA-VFFIPFLIMLYSYFCILN 186
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
63-244 5.70e-22

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 95.47  E-value: 5.70e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLA--NELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15337  12 ILGVIGNLLVIYLFSKTKSLRTPSNMFIINLAISD-FGFSAVNGFPLKtiSSFNKKWIWGKVACELYGFAGGIFGFMSIT 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQ-PDGAaypQCGL------NDETWYILS 213
Cdd:cd15337  91 TLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPPFFGWGRYvPEGF---QTSCtfdylsRDLNNRLFI 167
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   214 SC--IGSFFAPCLIMGLVYARIYRVAKRRTRTL 244
Cdd:cd15337 168 LGlfIFGFLCPLLIIIFCYVNIIRAVRNHEKEM 200
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
63-248 6.45e-22

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 95.43  E-value: 6.45e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnELMAY--WYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd14997  12 VVGVLGNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALV-ETWARepWLLGEFMCKLVPFVELTVAHASVL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL----VSLYRQPDGAAYPQCGLN-DETW---YIL 212
Cdd:cd14997  91 TILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLfiteFKEEDFNDGTPVAVCRTPaDTFWkvaYIL 170
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKR 248
Cdd:cd14997 171 STIVVFFVVPLAILSGLYSVICRRLVGHPALESRRA 206
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
60-241 1.27e-21

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 94.35  E-value: 1.27e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSL-ANELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15392   9 TIFVLAVGGNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPFSFiALLILQYWPFGEFMCPVVNYLQAVSVFVS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYwsvtQAVEYNLKRTPRRVKATIV--AVWLISAVISFP-PLVSLYRQPDGAaypQCGL--------NDE 207
Cdd:cd15392  89 AFTLVAISIDRY----VAIMWPLRPRMTKRQALLLiaVIWIFALATALPiAITSRLFEDSNA---SCGQyicteswpSDT 161
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   208 TWYILSSC--IGSFFAPCLIMGLVYARI-YRVAKRRT 241
Cdd:cd15392 162 NRYIYSLVlmILQYFVPLAVLVFTYTRIgIVVWAKRT 198
7tmA_mAChR_M4 cd15298
muscarinic acetylcholine receptor subtype M4, member of the class A family of ...
61-244 1.69e-21

muscarinic acetylcholine receptor subtype M4, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to G(i/o) types of G proteins. The M4 receptor is mainly found in the CNS and function as an inhibitory autoreceptor regulating acetycholine release. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341344 [Multi-domain]  Cd Length: 262  Bit Score: 93.55  E-value: 1.69e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15298  10 LSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYIIKGYWPLGAVVCDLWLALDYVVSNASVM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL------VSLYRQPDGAAYPQCGLNDETWYilSS 214
Cdd:cd15298  90 NLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWVLSFVLWAPAIlfwqfvVGKRTVPDNQCFIQFLSNPAVTF--GT 167
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVAKRR---TRTL 244
Cdd:cd15298 168 AIAAFYLPVVIMTVLYIHISLASARErkvTRTI 200
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
66-242 1.75e-21

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 94.01  E-value: 1.75e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15336  15 MLGNALVIYAFCRSKKLRTPANYFIINLAVSDFLMSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGALFGITSMITLLAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLyrqpdgAAYPQCGLNDE-TW-----------YILS 213
Cdd:cd15336  95 SLDRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSLPPLFGW------SAYVPEGLLTScTWdymtftpsvraYTML 168
                       170       180
                ....*....|....*....|....*....
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15336 169 LFCFVFFIPLGIIIYCYLFIFLAIRSTGR 197
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
63-246 5.22e-21

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 92.78  E-value: 5.22e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15083  12 LIGVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFSGGLFGIMSINTL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRqPDGAaypQCG-----LNDET---WYIL 212
Cdd:cd15083  92 AAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLPPLFgwSRYV-LEGL---LTScsfdyLSRDDanrSYVI 167
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSE 246
Cdd:cd15083 168 CLLIFGFVLPLLIIIYCYSFIFRAVRRHEKAMKE 201
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
63-444 6.70e-21

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 91.97  E-value: 6.70e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFcTSSIVHL 142
Cdd:cd14972  10 VFIVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSL-LASAYSL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSlyRQPDGAAYPQC----GLNDETWYILssCIGS 218
Cdd:cd14972  89 LAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLALLPVLG--WNCVLCDQESCsplgPGLPKSYLVL--ILVF 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   219 FFAPCLIMGLVYARIYRVAKRRTrtlsekrapvgpdgaspttenglgaAAGEARTGTARPRPPtwsrtraaqrprggapg 298
Cdd:cd14972 165 FFIALVIIVFLYVRIFWCLWRHA-------------------------NAIAARQEAAVPAQP----------------- 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   299 plrrggrrragaeggaggadgqgagpgaaqsgaltasrspgpggrlsrassrsvefflsrrrrarssvcrrkvaqAREKR 378
Cdd:cd14972 203 ---------------------------------------------------------------------------STSRK 207
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   379 FTFVLAVVMGVFVLCWFPFFFIYSLYGICREACQVPGpLFKFFFWIGYCNSSLNPVIYTVFNQDFR 444
Cdd:cd14972 208 LAKTVVIVLGVFLVCWLPLLILLVLDVLCPSVCDIQA-VFYYFLVLALLNSAINPIIYAFRLKEMR 272
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
60-250 1.50e-20

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 91.41  E-value: 1.50e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15202   9 FIIVFSLFGNVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQYCSVHVSA 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYwsvtQAVEYNLKR--TPRRVKATIVAVWLISAVISFP-PLVSLYRQPDGAAYPQCGLNDETW------- 209
Cdd:cd15202  89 YTLTAIAVDRY----QAIMHPLKPriSKTKAKFIIAVIWTLALAFALPhAICSKLETFKYSEDIVRSLCLEDWperadlf 164
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 178194   210 ---YILSSCIGSFFAPCLIMGLVYARIyrvakrrTRTLSEKRAP 250
Cdd:cd15202 165 wkyYDLALFILQYFLPLLVISFAYARV-------GIKLWASNMP 201
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
60-246 2.18e-20

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 91.10  E-value: 2.18e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15079   9 FLGIVSLLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDFLMM-IKMPIFIYNSFYEGWALGPLGCQIYAFLGSLSGIGSI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNlKRTPRRVKATIVAVWLISAVISFPPLV---SLYrQPDGaAYPQCG---LNDETW---Y 210
Cdd:cd15079  88 WTNAAIAYDRYNVIVKPLNGN-PLTRGKALLLILFIWLYALPWALLPLLfgwGRY-VPEG-FLTSCSfdyLTRDWNtrsF 164
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSE 246
Cdd:cd15079 165 VATIFVFAYVIPLIIIIYCYSFIVKAVFAHEKALRE 200
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
61-235 7.09e-20

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 89.41  E-value: 7.09e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd14992  10 IILVSVVGNFIVIAALARHKNLRGATNYFIASLAISDLLMALFCTPFNFTYVVSLSWEYGHFLCKIVNYLRTVSVYASSL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDG---AAYPQCGL----ND--ETW 209
Cdd:cd14992  90 TLTAIAFDRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAIPQLYyaTTEVLFSVknqEKIFCCQIppvdNKtyEKV 169
                       170       180
                ....*....|....*....|....*.
gi 178194   210 YILSSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd14992 170 YFLLIFVVIFVLPLIVMTLAYARISR 195
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
60-239 9.28e-20

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 88.81  E-value: 9.28e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFsLANELMAYWYFGQVWCGVYLALDVLFCT 136
Cdd:cd14984   7 YSLVFLLglVGNSLVLLVLLYYRKLRSMTDVYLLNLALADLLfVLTL--PF-WAVYAADGWVFGSFLCKLVSALYTINFY 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVsLYRQPDGAAYPQCGLNDE-----TWYI 211
Cdd:cd14984  84 SGILFLACISIDRYLAIVHAVSALRARTLLHGKLTCLGVWALALLLSLPEFI-FSQVSEENGSSICSYDYPedtatTWKT 162
                       170       180       190
                ....*....|....*....|....*....|.
gi 178194   212 LSSC---IGSFFAPCLIMGLVYARIYRVAKR 239
Cdd:cd14984 163 LLRLlqnILGFLLPLLVMLFCYSRIIRTLLR 193
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
60-252 1.11e-19

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 89.34  E-value: 1.11e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCT 136
Cdd:cd14979   7 YVAIFVVgiVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYpWAFGDGGCKLYYFLFEACTY 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP---------PLVSLYRQPDGAAYPQCGLNDE 207
Cdd:cd14979  87 ATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPilflmgiqyLNGPLPGPVPDSAVCTLVVDRS 166
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 178194   208 T-WYILSSCIGSFFA-PCLIMGLVYARIyRVAKRRTRTLSEKRAPVG 252
Cdd:cd14979 167 TfKYVFQVSTFIFFVlPMFVISILYFRI-GVKLRSMRNIKKGTRAQG 212
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
61-233 1.41e-19

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 88.51  E-value: 1.41e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15390  10 MVLVAIGGNLIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFNFTYLLYNDWPFGLFYCKFSNFVAITTVAASVF 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYwsvtQAVEYNLKR--TPRRVKATIVAVWLISAVISFPPL----VSLYRQPDGAAYPQCGL--------ND 206
Cdd:cd15390  90 TLMAISIDRY----IAIVHPLRPrlSRRTTKIAIAVIWLASFLLALPQLlystTETYYYYTGSERTVCFIawpdgpnsLQ 165
                       170       180
                ....*....|....*....|....*..
gi 178194   207 ETWYILSSCIGSFFAPCLIMGLVYARI 233
Cdd:cd15390 166 DFVYNIVLFVVTYFLPLIIMAVAYTRV 192
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
61-446 3.00e-19

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 87.75  E-value: 3.00e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSR-ALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDV--LFCTS 137
Cdd:cd15382  10 LFLIAAVGNLTVLLILLRNRrRKRSRVNILLMHLAIADLLVTFIMMPLEIGWAATVAWLAGDFLCRLMLFFRAfgLYLSS 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIvhLCAISLDRYWSVTQAVeyNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQ--PDGAAYPQC-------GLNDET 208
Cdd:cd15382  90 FV--LVCISLDRYFAILKPL--RLSDARRRGRIMLAVAWVISFLCSIPQSFIFHVEshPCVTWFSQCvtfnffpSHDHEL 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   209 WYILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKrapvgpdgaspttenglgaaageartgtarprpptwsrtra 288
Cdd:cd15382 166 AYNIFNMITMYALPLIIIVFCYSLILCEISRKSKEKKED----------------------------------------- 204
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   289 aqrprggapgplrrggrrragaeggaggadgqgagpGAAQSGALTASRSpgPGGRLSRASSRSVefflsrrrrarssvcr 368
Cdd:cd15382 205 ------------------------------------VSEKSSSVRLRRS--SVGLLERARSRTL---------------- 230
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   369 rkvaqarekRFTFVLAVvmgVFVLCWFPFFFIYSLYGICRE-ACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPS 446
Cdd:cd15382 231 ---------KMTIVIVL---VFIICWTPYFIMSLWYWFDREsASKVDPRIQKGLFLFAVSNSCMNPIVYGYFSIDLRRE 297
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
63-250 3.36e-19

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 87.69  E-value: 3.36e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnelMAYWYFGQVWCGVYLALDVLFCT-SSIVH 141
Cdd:cd15068  12 VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT---ISTGFCAACHGCLFIACFVLVLTqSSIFS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLY--RQPDG--AAYPQCG-------------L 204
Cdd:cd15068  89 LLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNncGQPKEgkNHSQGCGegqvaclfedvvpM 168
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 178194   205 NDETWYILSSCIgsfFAPCLIMGLVYARIYRVAKRRTRTLSEKRAP 250
Cdd:cd15068 169 NYMVYFNFFACV---LVPLLLMLGVYLRIFLAARRQLKQMESQPLP 211
7tmA_Histamine_H4R cd15295
histamine receptor subtype H4R, member of the class A family of seven-transmembrane G ...
60-242 3.69e-19

histamine receptor subtype H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtype H4R, a member of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320422 [Multi-domain]  Cd Length: 267  Bit Score: 87.19  E-value: 3.69e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15295   9 LLALVIVLGNALVIIAFVVDKNLRHRSNYFFLNLAISDFFVGAISIPLYIPYTLTNRWDFGRGLCVFWLVIDYLLCTASV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTP-RRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCIGS 218
Cdd:cd15295  89 YNIVLISYDRYQSVSNAVSYRNQQTAtLRIVTQMVAVWVLAFLVHGPAILVSDSWKTEDGECEPEFFSNWYILAITSVLE 168
                       170       180
                ....*....|....*....|....
gi 178194   219 FFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15295 169 FLVPVILVAYFNTQIYWSLWKRLR 192
7tmA_Delta_opioid_R cd15089
opioid receptor subtype delta, member of the class A family of seven-transmembrane G ...
63-248 3.86e-19

opioid receptor subtype delta, member of the class A family of seven-transmembrane G protein-coupled receptors; The delta-opioid receptor binds the endogenous pentapeptide ligands such as enkephalins and produces antidepressant-like effects. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320217 [Multi-domain]  Cd Length: 281  Bit Score: 87.31  E-value: 3.86e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILvATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15089  12 VVGLLGNVLVMYGIVRYTKMKTATNIYIFNLALADAL-ATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLN--DETWY---ILSSC-- 215
Cdd:cd15089  91 TMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLSSGVGVPIMVMAVTKTPRDGAVVCMLQfpSPSWYwdtVTKICvf 170
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   216 IGSFFAPCLIMGLVYA-RIYRVakRRTRTLSEKR 248
Cdd:cd15089 171 IFAFVVPILVITVCYGlMILRL--RSVRLLSGSK 202
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
61-240 3.93e-19

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 87.18  E-value: 3.93e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15979  10 IFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLMLAVFCMPFTLIPNLMGTFIFGEVICKAVAYLMGVSVSVSTF 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV----SLYRQPDGAAYPQCGLN------DETWY 210
Cdd:cd15979  90 SLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVysvtVPVPVGDRPRGHQCRHAwpsaqvRQAWY 169
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   211 ILSSCIgSFFAPCLIM----GLVYARIYR--VAKRR 240
Cdd:cd15979 170 VLLLLI-LFFIPGVVMivayGLISRELYRglLAKKR 204
7tmA_GPR161 cd15214
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G ...
63-238 4.14e-19

orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320342 [Multi-domain]  Cd Length: 261  Bit Score: 86.92  E-value: 4.14e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15214  11 ILICLGNLVIVVTLYKKSYLLTLSNKFVFSLTLSNLLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLLISSASMLTL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL----------------VSLYRQPDGAAYPQcglnd 206
Cdd:cd15214  91 GAIAIDRYYAVLYPMVYPMKITGNRAVLALVYIWLHSLIGCLPPLfgwsslefdrfkwmcvAAWHKEAGYTAFWQ----- 165
                       170       180       190
                ....*....|....*....|....*....|..
gi 178194   207 eTWYILsscigsffAPCLIMGLVYARIYRVAK 238
Cdd:cd15214 166 -VWCAL--------LPFVVMLVCYGFIFRVAR 188
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
60-233 6.34e-19

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 86.34  E-value: 6.34e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15012   6 YTLVFccCFFGNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVHSLSYTA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP---------PLVSLYRQPDGAAYPQCGLNDET 208
Cdd:cd15012  86 SIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPyfvfsqtveILVTQDGQEEEICVLDREMFNSK 165
                       170       180
                ....*....|....*....|....*
gi 178194   209 WYILSSCIGSFFAPCLIMGLVYARI 233
Cdd:cd15012 166 LYDTINFIVWYLIPLLIMTVLYSKI 190
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
63-240 1.04e-18

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 85.91  E-value: 1.04e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15206  12 LLAVVGNILVIVTLVQNKRMRTVTNVFLLNLAVSDLLLAVFCMPFTLVGQLLRNFIFGEVMCKLIPYFQAVSVSVSTFTL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV-SLYRQPDGAAYPQCGL------NDETWYILSSC 215
Cdd:cd15206  92 VAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSPILVfSNLIPMSRPGGHKCREvwpneiAEQAWYVFLDL 171
                       170       180
                ....*....|....*....|....*...
gi 178194   216 IgSFFAPCLIMGLVYARIYR---VAKRR 240
Cdd:cd15206 172 M-LLVIPGLVMSVAYGLISWtllEAKKR 198
7tmA_NPR-like_invertebrate cd15391
invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G ...
62-241 1.22e-18

invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes putative neuropeptide receptor found in invertebrates, which is a member of class A of 7-transmembrane G protein-coupled receptors. This orphan receptor shares a significant amino acid sequence identity with the neurokinin 1 receptor (NK1R). The endogenous ligand for NK1R is substance P, an 11-amino acid peptide that functions as a vasodilator and neurotransmitter and is released from the autonomic sensory nerve fibers.


Pssm-ID: 320513 [Multi-domain]  Cd Length: 289  Bit Score: 86.03  E-value: 1.22e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15391  11 IFLSVGGNYSVIVVFYDGRRSRTDLNYYLINLAVSDLIMALFCMPFTFTQIMLGHWVFPAPMCPIVLYVQLVSVTASVLT 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 LCAISLDRYWSVTQAVEYnlKRTPRRVKATIVAVWLISAVIS----FPPLVSLYRQpDGAAYPQCGL---NDETW---YI 211
Cdd:cd15391  91 NTAIGIDRFFAVIFPLRS--RHTKSRTKCIIASIWAISFSLSsvqlFAGRTQRYGQ-YSEGRVLCGEswpGPDTSrsaYT 167
                       170       180       190
                ....*....|....*....|....*....|.
gi 178194   212 LSSCIGSFFAPCLIMGLVYARI-YRVAKRRT 241
Cdd:cd15391 168 VFVMLLTYIIPLLILTSTYGYVgFRLWNRTA 198
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
61-444 2.06e-18

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 85.51  E-value: 2.06e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd14986  10 LFVFTLVGNGLVILVLRRKRKKRSRVNIFILNLAIADLVVAFFTVLTQIIWEATGEWVAGDVLCRIVKYLQVVGLFASTY 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYwsvtQAVEYNLKRT--PRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC---GLNDETW--YILS 213
Cdd:cd14986  90 ILVSMSLDRY----QAIVKPMSSLkpRKRARLMIVVAWVLSFLFSIPQLVIFVERELGDGVHQCwssFYTPWQRkvYITW 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRtrtlsekrapvgpdgaspttenglgaaageARTGTARPRPPTwsrtraaqrpr 293
Cdd:cd14986 166 LATYVFVIPLIILSYCYGRILRTIWIR------------------------------SRQKTDRPIAPT----------- 204
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   294 ggapgplrrggrrragaeggaggadgqgagpgaaqsgaltasrspGPGGRLSRASSRSVEfflsrrrrarssvcrrKVAQ 373
Cdd:cd14986 205 ---------------------------------------------AMSCRSVSCVSSRVS----------------LISR 223
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194   374 AREKRFTFVLAVVMGvFVLCWFPFFFIySLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFR 444
Cdd:cd14986 224 AKIKTIKMTLVIILA-FILCWTPYFIV-QLLDVYAGMQQLENDAYVVSETLASLNSALNPLIYGFFSSHLS 292
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
61-235 2.67e-18

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 84.63  E-value: 2.67e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15001   9 TFVLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWsvtqAVEYNLK----RTPRRVKATIVAVWLISAVISFPPLVS----LYRQPDGAAYPQC-----GLNDE 207
Cdd:cd15001  89 TLTAISIERYY----VILHPMKaksfCTIGRARKVALLIWILSAILASPVLFGqglvRYESENGVTVYHCqkawpSTLYS 164
                       170       180
                ....*....|....*....|....*...
gi 178194   208 TWYILSSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15001 165 RLYVVYLAIVIFFIPLIVMTFAYARDTR 192
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
66-240 3.00e-18

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 84.44  E-value: 3.00e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFgqVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15070  15 VVGNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIPLAIVVSLGVTIHF--YSCLFMSCLLVVFTHASIMSLLAI 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDG----AAYPQCGLNDET---WYILSSCIGS 218
Cdd:cd15070  93 AVDRYLRVKLTVRYRIVTTQRRIWLALGLCWLVSFLVGLTPMFGWNRKPSLesvnTTPLQCQFTSVMrmdYMVYFSFFTW 172
                       170       180
                ....*....|....*....|..
gi 178194   219 FFAPCLIMGLVYARIYRVAKRR 240
Cdd:cd15070 173 ILIPLVIMCALYVDIFYIIRNK 194
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
63-241 3.59e-18

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 84.40  E-value: 3.59e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15073  12 IISTISNGIVLVTFVKFRELRTPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGCQWYAFLNIFFGMASIGLL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWsVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYR---QPDGAAypqCGL----NDETW--YILS 213
Cdd:cd15073  92 TVVAVDRYL-TICRPDLGRKMTTNTYTVMILLAWTNAFFWAAMPLVGWASyalDPTGAT---CTInwrkNDSSFvsYTMS 167
                       170       180
                ....*....|....*....|....*...
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRT 241
Cdd:cd15073 168 VIVVNFIVPLAVMFYCYYNVSRFVKKVL 195
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
65-235 4.41e-18

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 84.25  E-value: 4.41e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    65 TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCA 144
Cdd:cd15074  14 STLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGFLFGCCSINTLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   145 ISLDRYWSVTQAvEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYR-QPDGAAypqCGLNdetW-----------Y 210
Cdd:cd15074  94 ISIYRYLKICHP-PYGPKLSRRHVCIVIVAIWLYALFWAVAPLVgwGSYGpEPFGTS---CSID---WtgasasvggmsY 166
                       170       180
                ....*....|....*....|....*
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15074 167 IISIFIFCYLLPVLIIVFSYVKIIR 191
7tmA_Mu_opioid_R cd15090
opioid receptor subtype mu, member of the class A family of seven-transmembrane G ...
61-231 6.27e-18

opioid receptor subtype mu, member of the class A family of seven-transmembrane G protein-coupled receptors; The mu-opioid receptor binds endogenous opioids such as beta-endorphin and endomorphin. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320218 [Multi-domain]  Cd Length: 279  Bit Score: 83.51  E-value: 6.27e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILvATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15090  10 VCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL-ATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIF 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV-SLYRQPDGAAYPQCGLNDETWY---ILSSC- 215
Cdd:cd15090  89 TLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFmATTKYRQGSIDCTLTFSHPSWYwenLLKICv 168
                       170
                ....*....|....*..
gi 178194   216 -IGSFFAPCLIMGLVYA 231
Cdd:cd15090 169 fIFAFIMPVLIITVCYG 185
7tmA_GPR45 cd15403
G protein-coupled receptor 45, member of the class A family of seven-transmembrane G ...
60-241 8.40e-18

G protein-coupled receptor 45, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the human orphan receptor GPR45 and closely related proteins found in vertebrates. GPR45 is also called PSP24 in Xenopus and PSP24-alpha (or PSP24-1) in mammals. GPR45 shows the highest sequence homology with GPR63 (PSP24-beta, or PSP24-2). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320525 [Multi-domain]  Cd Length: 301  Bit Score: 83.74  E-value: 8.40e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15403   9 LMIAIGFLGNAIVCLIVYQKPAMRSAINLLLATLAFSDIMLSLLCMPFTAVTIITVDWHFGAHFCRISAMLYWFFVLEGV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEynlKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLN-----DETWYILSS 214
Cdd:cd15403  89 AILLIISVDRFLIIVQRQD---KLNPHRAKVMIAISWVLSFCISFPSVVGWTLVEVPARAPQCVLGytespADRVYAVLL 165
                       170       180
                ....*....|....*....|....*..
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVAKRRT 241
Cdd:cd15403 166 VVAVFFVPFSIMLYSYLCILNTVRRNA 192
7tmA_UII-R cd14999
urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled ...
66-250 8.63e-18

urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The urotensin-II receptor (UII-R, also known as the hypocretin receptor) is a member of the class A rhodopsin-like G-protein coupled receptors, which binds the peptide hormone urotensin-II. Urotensin II (UII) is a vasoactive somatostatin-like or cortistatin-like peptide hormone. However, despite the apparent structural similarity to these peptide hormones, they are not homologous to UII. Urotensin II was first identified in fish spinal cord, but later found in humans and other mammals. In fish, UII is secreted at the back part of the spinal cord, in a neurosecretory centre called uroneurapophysa, and is involved in the regulation of the renal and cardiovascular systems. In mammals, urotensin II is the most potent mammalian vasoconstrictor identified to date and causes contraction of arterial blood vessels, including the thoracic aorta. The urotensin II receptor is a rhodopsin-like G-protein coupled receptor, which binds urotensin-II. The receptor was previously known as GPR14, or sensory epithelial neuropeptide-like receptor (SENR). The UII receptor is expressed in the CNS (cerebellum and spinal cord), skeletal muscle, pancreas, heart, endothelium and vascular smooth muscle. It is involved in the pathophysiological control of cardiovascular function and may also influence CNS and endocrine functions. Binding of urotensin II to the receptor leads to activation of phospholipase C, through coupling to G(q/11) family proteins. The resulting increase in intracellular calcium may cause the contraction of vascular smooth muscle.


Pssm-ID: 320130 [Multi-domain]  Cd Length: 282  Bit Score: 83.26  E-value: 8.63e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd14999  14 VAGNVYTLVVMCLSMRPRASMYVYILNLALAD-LLYLLTIPFYVSTYFLKKWYFGDVGCRLLFSLDFLTMHASIFTLTVM 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPPLVSL---YRQPDGAAYPQCGLndETW-------YILSSC 215
Cdd:cd14999  93 STERYLAVVKPLD-TVKRSKSYRKLLAGVIWLLSLLLTLPMAIMIrlvTVEDKSGGSKRICL--PTWseesykvYLTLLF 169
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   216 IGSFFAPCLIMGLVY---ARIYRVAKRRTRTLSEKRAP 250
Cdd:cd14999 170 STSIVIPGLVIGYLYirlARKYWLSQAAASNSSRKRLP 207
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
60-235 1.02e-17

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 83.11  E-value: 1.02e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15096   9 LIFIVGLIGNSLVILVVLSNQQMRSTTNILILNLAVADLLFVVFCVPFTATDYVLPTWPFGDVWCKIVQYLVYVTAYASV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS---LYRQPDGAAYPQCGLNDETWYILSSCI 216
Cdd:cd15096  89 YTLVLMSLDRYLAVVHPITSMSIRTERNTLIAIVGIWIVILVANIPVLFLhgvVSYGFSSEAYSYCTFLTEVGTAAQTFF 168
                       170       180
                ....*....|....*....|....
gi 178194   217 GSFF-----APCLIMGLVYARIYR 235
Cdd:cd15096 169 TSFFlfsylIPLTLICVLYMLMLR 192
7tmA_GPR83 cd15389
G protein-coupled receptor 83, member of the class A family of seven-transmembrane G ...
60-235 1.47e-17

G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR83, also known as GPR72, is widely expressed in the brain, including hypothalamic nuclei which is involved in regulating energy balance and food intake. The hypothalamic expression of GPR83 is tightly regulated in response to nutrient availability and is decreased in obese mice. A recent study suggests that GPR83 has a critical role in the regulation of systemic energy metabolism via ghrelin-dependent and ghrelin-independent mechanisms. GPR83 shares a significant amino acid sequence identity with the tachykinin receptors, however its endogenous ligand is unknown.


Pssm-ID: 320511 [Multi-domain]  Cd Length: 285  Bit Score: 82.77  E-value: 1.47e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15389   9 IIIVISLFGNSLVCHVIFKNKRMHTATNLFIVNLAVSDILITLLNTPFTLVRFVNSTWVFGKIMCHLSRFAQYCSVYVST 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYwsvtQAVEYNLKR--TPRRVKATIVAVWLISAVISFPPLV--SLYRQPDG---------AAYPQCGLND 206
Cdd:cd15389  89 LTLTAIALDRH----RVILHPLKPriTPCQGVVVIAIIWIMASCLSLPHAIyqKLVEFEYSnertrsrclPSFPEPSDLF 164
                       170       180
                ....*....|....*....|....*....
gi 178194   207 ETWYILSSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15389 165 WKYLDLATFILQYVLPLLIIGVAYTRVAK 193
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
61-240 1.83e-17

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 82.67  E-value: 1.83e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnelMAYWYFGQVWCGVYLALDVLFCT-SSI 139
Cdd:cd15069  10 IAALSVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAIT---ISLGFCTDFHSCLFLACFVLVLTqSSI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP----------DGAAYPQCGLND--- 206
Cdd:cd15069  87 FSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAFGIGLTPFLGWNKAMsatnnstnpaDHGTNHSCCLISclf 166
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 178194   207 -----ETWYILSSCIGSFFAPCLIMGLVYARIYRVAKRR 240
Cdd:cd15069 167 envvpMSYMVYFNFFGCVLPPLLIMLVIYIKIFLVACRQ 205
7tmA_NPY2R cd15399
neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G ...
61-234 5.70e-17

neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. When NPY signals through NPY2R in concert with NPY5R, it induces angiogenesis and consequently plays an important role in revascularization and wound healing. On the other hand, when NPY acts through NPY1R and NPYR5, it acts as a vascular mitogen, leading to restenosis and atherosclerosis.


Pssm-ID: 320521 [Multi-domain]  Cd Length: 285  Bit Score: 81.02  E-value: 5.70e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15399  10 IILLGVVGNSLVIYVVIKFKNMRTVTNFFIANLAVADLMVNTLCLPFTLVYTLLDEWKFGAVLCHLVPYAQALAVHVSTV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEynlKRTPRRVKATIVAV-WLISAVISFPplVSLYRQ-------PD------GAAYPQCGLND 206
Cdd:cd15399  90 TLTVIALDRHRCIVYHLE---SKISKKISFLIIGLtWAASALLASP--LAIFREysvieisPDfkiqacSEKWPNGTLND 164
                       170       180
                ....*....|....*....|....*...
gi 178194   207 ETWYILSSCIGSFFAPCLIMGLVYARIY 234
Cdd:cd15399 165 GTIYSVSMLLIQYVLPLAIISYAYIRIW 192
7tmA_GnRHR_vertebrate cd15383
vertebrate gonadotropin-releasing hormone receptors, member of the class A family of ...
61-251 6.88e-17

vertebrate gonadotropin-releasing hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. GnRHR is expressed predominantly in the gonadotrope membrane of the anterior pituitary as well as found in numerous extrapituitary tissues including lymphocytes, breast, ovary, prostate, and cancer cell lines. There are at least two types of GnRH receptors, GnRHR1 and GnRHR2, which couple primarily to G proteins of the Gq/11 family. GnRHR is closely related to the adipokinetic hormone receptor (AKH), which binds to a lipid-mobilizing hormone that is involved in control of insect metabolism. They share a common ancestor and are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320505 [Multi-domain]  Cd Length: 295  Bit Score: 80.87  E-value: 6.88e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALR-APQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15383  10 LFVLSACSNLAVLWSATRNRRRKlSHVRILILHLAAADLLVTFVVMPLDAAWNVTVQWYAGDLACRLLMFLKLFAMYSSA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRtpRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAAYPQCGLN-------DETWY 210
Cdd:cd15383  90 FVTVVISLDRHAAILNPLAIGSAR--RRNRIMLCAAWGLSALLALPQLFlfHTVTATPPVNFTQCATHgsfpahwQETLY 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARI-YRVAKRRTRTLSEKRAPV 251
Cdd:cd15383 168 NMFTFFCLFLLPLLIMIFCYTRIlLEISRRMKEKKDSAKNEV 209
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
66-233 8.24e-17

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 80.53  E-value: 8.24e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15393  15 VVGNFLVIWVVAKNRRMRTVTNIFIANLAVADIIIGLFSIPFQFQAALLQRWVLPRFMCPFCPFVQVLSVNVSVFTLTVI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYwsvtQAVEYNLKR--TPRRVKATIVAVWLISAVISFPPLVSLY-----RQPDGAAYPQC---GLNDETW--YILS 213
Cdd:cd15393  95 AVDRY----RAVIHPLKArcSKKSAKIIILIIWILALLVALPVALALRveeltDKTNNGVKPFClpvGPSDDWWkiYNLY 170
                       170       180
                ....*....|....*....|
gi 178194   214 SCIGSFFAPCLIMGLVYARI 233
Cdd:cd15393 171 LVCVQYFVPLVIICYAYTRI 190
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
60-249 8.42e-17

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 80.75  E-value: 8.42e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIaVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-------YWYFGQVWCGVYLALdv 132
Cdd:cd14978   9 VICIFGIIGNILNLV-VLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADysssflsYFYAYFLPYIYPLAN-- 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPP-----LVSLYRQPDGAAYPQCGLND- 206
Cdd:cd14978  86 TFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRffeyeVVECENCNNNSYYYVIPTLLr 165
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   207 ------ETWYILSSCIGSFFAPCLIMGLVYARI---YRVAKRRTRTLSEKRA 249
Cdd:cd14978 166 qnetylLKYYFWLYAIFVVLLPFILLLILNILLiraLRKSKKRRRLLRRRRR 217
7tmA_Kappa_opioid_R cd15091
opioid receptor subtype kappa, member of the class A family of seven-transmembrane G ...
60-230 1.70e-16

opioid receptor subtype kappa, member of the class A family of seven-transmembrane G protein-coupled receptors; The kappa-opioid receptor binds the opioid peptide dynorphin as the primary endogenous ligand. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320219 [Multi-domain]  Cd Length: 282  Bit Score: 79.61  E-value: 1.70e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATlVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15091   7 YSVVFVVglVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTT-TMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV---SLYRQPDGAAypQCGL---NDETWY- 210
Cdd:cd15091  86 SIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLSSSVGISAIVlggTKVREDVDST--ECSLqfpDDDYSWw 163
                       170       180
                ....*....|....*....|....
gi 178194   211 --ILSSC--IGSFFAPCLIMGLVY 230
Cdd:cd15091 164 dtFMKICvfIFAFVIPVLIIIVCY 187
7tmA_CXCR5 cd15181
CXC chemokine receptor type 5, member of the class A family of seven-transmembrane G ...
61-249 1.81e-16

CXC chemokine receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR5 is a B-cell selective receptor that binds specifically to the homeostatic chemokine CXCL13 and regulates adaptive immunity. The receptor is found on all peripheral blood and tonsillar B cells and is involved in lymphocyte migration (homing) to specific tissues and development of normal lymphoid tissue. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341336 [Multi-domain]  Cd Length: 281  Bit Score: 79.41  E-value: 1.81e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLAnELMAYWYFGQVWCGVYLALDVL--FCTSS 138
Cdd:cd15181  10 VFLLGVVGNGLVLTILLRRRRSRRTTENYLLHLALADLLL-LLTFPFSVV-ESIAGWVFGTFLCKLVGAIHKLnfYCSSL 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IvhLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAA------YPQCGLNDETWYIL 212
Cdd:cd15181  88 L--LACISVDRYLAIVHAIHSYRHRRLRSVHLTCGSIWLVCFLLSLPNLVFLEVETSTNAnrtscsFHQYGIHESNWWLT 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 178194   213 SSC---IGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15181 166 SRFlyhVVGFFLPLLIMGYCYATIVVTLCQSSRRLQKQKA 205
7tmA_GPR63 cd15404
G protein-coupled receptor 63, member of the class A family of seven-transmembrane G ...
60-226 3.30e-16

G protein-coupled receptor 63, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the human orphan receptor GPR63, which is also called PSP24-beta or PSP24-2, and its closely related proteins found in vertebrates. GPR63 shares the highest sequence homology with GPR45 (Xenopus PSP24, mammalian PSP24-alpha or PSP24-1). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320526 [Multi-domain]  Cd Length: 265  Bit Score: 78.34  E-value: 3.30e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15404   9 FILLVSFLGNFVVCLMVYQKAAMRSAINILLASLAFADMMLAVLNMPFALVTIITTRWIFGDAFCRVSAMFFWLFVMEGV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEynlKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDET-----WYILSS 214
Cdd:cd15404  89 AILLIISIDRFLIIVQKQD---KLNPYRAKVLIAVSWAVSFCVAFPLAVGSPDLQIPSRAPQCVFGYTTnpgyqAYVILI 165
                       170
                ....*....|..
gi 178194   215 CIGSFFAPCLIM 226
Cdd:cd15404 166 MLIFFFIPFMVM 177
7tmA_SSTR cd15093
somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
66-248 3.69e-16

somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. They share common signaling cascades such as inhibition of adenylyl cyclase, activation of phosphotyrosine phosphatase activity, and G-protein-dependent regulation of MAPKs.


Pssm-ID: 320221 [Multi-domain]  Cd Length: 280  Bit Score: 78.66  E-value: 3.69e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15093  15 LCGNSLVIYVVLRYAKMKTVTNIYILNLAIADELF-MLGLPFLAASNALRHWPFGSVLCRLVLSVDGINMFTSIFCLTVM 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLN----DETWY---ILSSCIGS 218
Cdd:cd15093  94 SVDRYLAVVHPIKSARWRRPRVAKVVNLAVWVASLLVILPVVVFAGTRENQDGSSACNMQwpepAAAWSagfIIYTFVLG 173
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   219 FFAPCLIMGLVYARIYRVAK-------RRTRTLSEKR 248
Cdd:cd15093 174 FLLPLLIICLCYLLIVIKVKsaglragWQQRKRSERK 210
7tmA_CXCR3 cd15180
CXC chemokine receptor type 3, member of the class A family of seven-transmembrane G ...
61-249 6.49e-16

CXC chemokine receptor type 3, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR3 is an inflammatory chemotactic receptor for a group of CXC chemokines distinguished by the presence of the amino acid motif ELR immediately adjacent to their CXC motif. CXCR3 specifically binds three chemokines CXCL9 (monokine induced by gamma-interferon), CXCL10 (interferon induced protein of 10 kDa), and CXCL11 (interferon inducible T-cell alpha-chemoattractant, I-TAC). CXC3R is expressed on CD4+ Th1 and CD8+ cytotoxic T lymphocytes as well as highly on innate lymphocytes, such as NK cells and NK T cells, where it may mediate the recruitment of these cells to the sites of infection and inflammation. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341335 [Multi-domain]  Cd Length: 280  Bit Score: 77.81  E-value: 6.49e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFsLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15180  10 VFLLGLLGNGLVLAVLLQKRRNLSVTDTFILHLALADILL-LVTLPF-WAVQAVHGWIFGTGLCKLAGAVFKINFYCGIF 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL-----YRQPDGAAYPQCGLNDETWYILSSC 215
Cdd:cd15180  88 LLACISFDRYLSIVHAVQMYSRKKPMLVHLSCLIVWLFCLLLSIPDFIFLeatkdPRQNKTECVHNFPQSDTYWWLALRL 167
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   216 ---IGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15180 168 lyhIVGFLLPLAVMVYCYTSILLRLLRSSQGFQKQRA 204
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
60-248 2.86e-15

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 75.76  E-value: 2.86e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCT 136
Cdd:cd14982   7 YSLIFILglLGNILALWVFLRKMKKRSPTTIYMINLALADLLF-VLTLPFRIYYYLNGgWWPFGDFLCRLTGLLFYINMY 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETW------Y 210
Cdd:cd14982  86 GSILFLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVPLLLLRSTIAKENNSTTCFEFLSEWlasaapI 165
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRvAKRRTRTLSEKR 248
Cdd:cd14982 166 VLIALVVGFLIPLLIILVCYSLIIR-ALRRRSKQSQKS 202
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
63-249 2.94e-15

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 75.88  E-value: 2.94e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASAD-ILVATLvmPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd14985  12 LVGLLGNLFVVWVFLFPRGPKRVADIFIANLAAADlVFVLTL--PLWATYTANQYdWPFGAFLCKVSSYVISVNMFASIF 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP-DGAAYPQCGLNDETW-----YILSS 214
Cdd:cd14985  90 LLTCMSVDRYLAIVHPVASRRLRRRRQARVTCALIWVVACLLSLPTFLLRSLQAiENLNKTACIMLYPHEawhfgLSLEL 169
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   215 CIGSFFAPCLIMGLVYARIYR-VAKRRTRTLSEKRA 249
Cdd:cd14985 170 NILGFVLPLLIILTCYFHIARsLRKRYERTGKNGRK 205
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
61-244 3.33e-15

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 75.99  E-value: 3.33e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLAnELMAY--WYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15928  10 LMLVGASGNLLTVLVIGRSRDMRTTTNLYLSSLAVSDLLI-FLVLPLDLY-RLWRYrpWRFGDLLCRLMYFFSETCTYAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGlNDETWYILSSCIGS 218
Cdd:cd15928  88 ILHITALSVERYLAICHPLRAKVLVTRGRVKLLIAVIWAVAIVSAGPALVLVGVEHIQGQQTPRG-FECTVVNVSSGLLS 166
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   219 ---------FFAPCLIMGLVYARIYRVAKRRTRTL 244
Cdd:cd15928 167 vmlwvstsfFFVPMVCLSLLYGLIGRALWDRRQRS 201
7tmA_SSTR3 cd15972
somatostatin receptor type 3, member of the class A family of seven-transmembrane G ...
60-248 3.91e-15

somatostatin receptor type 3, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR3 is coupled to inward rectifying potassium channels. SSTR3 plays critical roles in growth hormone secretion, endothelial cell cycle arrest and apoptosis. Furthermore, SSTR3 is expressed in the normal human pituitary and in nearly half of pituitary growth hormone adenomas.


Pssm-ID: 320638 [Multi-domain]  Cd Length: 279  Bit Score: 75.61  E-value: 3.91e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15972   7 YLVVCVVglGGNTLVIYVVLRYSASESVTNIYILNLALADELF-MLGLPFLAAQNALSYWPFGSFMCRLVMTVDAINQFT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFpPLVSLYRQPDGA-----AYPQCGLNDETWYIL 212
Cdd:cd15972  86 SIFCLTVMSVDRYLAVVHPIRSSKWRKPPVAKTVNATVWALSFLVVL-PVVIFSGVPGGMgtchiAWPEPAQVWRAGFII 164
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 178194   213 SSCIGSFFAPCLIMGLVYARIY---RVAKRRTRTLSEKR 248
Cdd:cd15972 165 YTATLGFFCPLLVICLCYLLIVvkvRSSGRRVRATSTKR 203
7tmA_SSTR5 cd15974
somatostatin receptor type 5, member of the class A family of seven-transmembrane G ...
60-248 5.25e-15

somatostatin receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR5 is coupled to inward rectifying K channels and phospholipase C, and plays critical roles in growth hormone and insulin secretion. SSTR5 acts as a negative regulator of PDX-1 (pancreatic and duodenal homeobox-1) expression, which is a conserved homeodomain-containing beta cell-specific transcription factor essentially involved in pancreatic development, among many other functions.


Pssm-ID: 320640 [Multi-domain]  Cd Length: 277  Bit Score: 75.22  E-value: 5.25e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15974   7 YLLVCAIglSGNTLVIYVVLRYAKMKTVTNIYILNLAVADELF-MLGLPFLATQNAISYWPFGSFLCRLVMTVDGVNQFT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDG----AAYPQCGLNDETWYILS 213
Cdd:cd15974  86 SIFCLTVMSIDRYLAVVHPIKSTKWRRPRVAKLINATVWTLSFLVVLPVIIFSDVQPDLntcnISWPEPVSVWSTAFIIY 165
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   214 SCIGSFFAPCLIMGLVYARIY-RVAKRRTRTLSEKR 248
Cdd:cd15974 166 TAVLGFFGPLLVICLCYLLIViKVKSSGLRVGSTKR 201
7tmA_MCHR-like cd15088
melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G ...
66-233 5.73e-15

melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320216 [Multi-domain]  Cd Length: 278  Bit Score: 74.80  E-value: 5.73e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFsLANELMA--YWYFGQVWCGVYLALDVLFCTSSIVHLC 143
Cdd:cd15088  15 LVGNGIVLYVLVRCSKLRTAPDIFIFNLAVAD-LLFMLGMPF-LIHQFAIdgQWYFGEVMCKIITALDANNQFTSTYILT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAAYpqCGLN-----DETWYILSSCI 216
Cdd:cd15088  93 AMSVDRYLAVVHPIRSTKYRTRFVAKLVNVGLWAASFLSILPVWVysSLIYFPDGTTF--CYVSlpspdDLYWFTIYHFI 170
                       170
                ....*....|....*..
gi 178194   217 GSFFAPCLIMGLVYARI 233
Cdd:cd15088 171 LGFAVPLVVITVCYILI 187
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
61-249 8.61e-15

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 75.20  E-value: 8.61e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     61 LIVFTVVGNVLVVIaVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:PHA03087  50 IFFFGLVGNIIVIY-VLTKTKIKTPMDIYLLNLAVSDLLF-VMTLPFQIYYYILFQWSFGEFACKIVSGLYYIGFYNSMN 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV---------SLYRQPDgaaYPQCGLNDETWYI 211
Cdd:PHA03087 128 FITVMSVDRYIAIVHPVKSNKINTVKYGYIVSLVIWIISIIETTPILFvyttkkdheTLICCMF---YNNKTMNWKLFIN 204
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 178194    212 LSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:PHA03087 205 FEINIIGMLIPLTILLYCYSKILITLKGINKSKKNKKA 242
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
60-254 8.74e-15

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 74.43  E-value: 8.74e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15209   9 VTIVVDVLGNLLVILSVLRNKKLRNAGNIFVVSLSVADLVVAIYPYPLILHAIFHNGWTLGQLHCQASGFIMGLSVIGSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYpQCGLND--ETWYILSSCIG 217
Cdd:cd15209  89 FNITAIAINRYCYICHSLQYDRLYSLRNTCCYLCLTWLLTVLAVLPNFFIGSLQYDPRIY-SCTFAQtvSTVYTITVVVI 167
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   218 SFFAPCLIMGLVYARIYrvakrrTRTLSEKRaPVGPD 254
Cdd:cd15209 168 HFLLPLLIVSFCYLRIW------VLVLQVRQ-RVKPD 197
7tmA_CXCR1_2 cd15178
CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G ...
60-249 1.29e-14

CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR1 and CXCR2 are closely related chemotactic receptors for a group of CXC chemokines distinguished by the presence of the amino acid motif ELR immediately adjacent to their CXC motif. Expression of CXCR1 and CXCR2 is strictly controlled in neutrophils by external stimuli such as lipopolysaccharide (LPS), tumor necrosis factor (TNF)-alpha, Toll-like receptor agonists, and nitric oxide. CXCL8 (formerly known as interleukin-8) binds with high-affinity and activates both receptors. CXCR1 also binds CXCL7 (neutrophil-activating protein-2), whereas CXCR2 non-selectively binds to all seven ELR-positive chemokines (CXCL1-7). Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341333 [Multi-domain]  Cd Length: 279  Bit Score: 73.85  E-value: 1.29e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSlANELMAYWYFGQVWCG-VYLALDVLFcTSS 138
Cdd:cd15178   9 LVFLLSLPGNSLVVLVILYNRRSRSSTDVYLLHLAIADLLFA-LTLPFW-AVSVVKGWIFGTFMCKlVSLLQEANF-YSG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQ---PDGAAYPQC-----GLNDETWY 210
Cdd:cd15178  86 ILLLACISVDRYLAIVHATR-ALTQKRHLVKFVCAGVWLLSLLLSLPALL--NRDafkPPNSGRTVCyenlgNESADKWR 162
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 178194   211 ----ILSSCIGsFFAPCLIM----GLVYARIYrvakrRTRTLSEKRA 249
Cdd:cd15178 163 vvlrILRHTLG-FLLPLVVMlfcyGFTIKTLL-----QTRSFQKHRA 203
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
62-187 3.53e-14

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 72.30  E-value: 3.53e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVG---NVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15210   8 IVFMVVGvpgNLLTVLALLRSKKLRTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGLVAVS 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15210  88 LLTLVLITLNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFGSFLPLW 136
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
60-235 3.94e-14

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 72.50  E-value: 3.94e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd14971   9 LIFLLGLVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMCKFVHYFQQVSMHASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLvSLYRQPDGAAYPQCGLND-------ETWYIL 212
Cdd:cd14971  89 FTLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAAPVL-ALHRLRNYTPGNRTVCSEawpsrahRRAFAL 167
                       170       180
                ....*....|....*....|...
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd14971 168 CTFLFGYLLPLLLICVCYAAMLR 190
7tmA_NMU-R2 cd15357
neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G ...
61-239 4.03e-14

neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320479 [Multi-domain]  Cd Length: 293  Bit Score: 72.59  E-value: 4.03e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15357  10 IFVVGVIGNLLVCLVILKHQNMKTPTNYYLFSLAVSDLLVLLFGMPLEVYEMWSNYpFLFGPVGCYFKTALFETVCFASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL----VSLYRQPDGAAYPQ---CGLNDETW-YI 211
Cdd:cd15357  90 LSVTTVSVERYVAILHPFRAKLNSTRERALKIIVVLWVLSVLFSIPNTsihgIKLQYFPNGTLIPDsatCTVVKPLWiYN 169
                       170       180
                ....*....|....*....|....*...
gi 178194   212 LSSCIGSFFAPCLIMGLVYARIYRVAKR 239
Cdd:cd15357 170 LIIQITSLLFYVLPMGVISVLYYLMGLK 197
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
61-248 4.15e-14

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 72.70  E-value: 4.15e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCG-VYLALDVLFcTSSI 139
Cdd:cd15095  10 IFLVGLAGNSLVIYVVSRHREMRTVTNYYIVNLAVTDLAFLVCCVPFTAALYATPSWVFGDFMCKfVNYMMQVTV-QATC 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVsLYRQPDGAAYPQCGLNDETW--------YI 211
Cdd:cd15095  89 LTLTALSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSIPVAI-YYRLEEGYWYGPQTYCREVWpskafqkaYM 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 178194   212 LSSCIGSFFAPCLIMGLVYARI------------YRVAKRRTRTLSEKR 248
Cdd:cd15095 168 IYTVLLTYVIPLAIIAVCYGLIlrrlwrrsvdgnNQSEQLSERALRQKR 216
7tmA_NPY4R cd15397
neuropeptide Y receptor type 4, member of the class A family of seven-transmembrane G ...
61-247 4.15e-14

neuropeptide Y receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety.


Pssm-ID: 320519 [Multi-domain]  Cd Length: 293  Bit Score: 72.46  E-value: 4.15e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15397  10 VMAVGLLGNICLICVIARQKEKTNVTNILIANLSFSDILVCLVCLPFTVVYTLMDYWIFGEVLCKMTPFIQCMSVTVSIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYnlKRTPRRVKATIVAVWLISAVISFPPLV------SLYRQ-----PDGAAYPQCglnDETW 209
Cdd:cd15397  90 SLVLIALERHQLIINPTGW--KPSVSQAYLAVVVIWMLACFISLPFLAfhiltdEPYKNlshffAPLADKAVC---TESW 164
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 178194   210 --------YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEK 247
Cdd:cd15397 165 psehhklaYTTWLLLFQYCLPLLFILVCYLRIYLRLRRRKDMLERR 210
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
65-242 4.19e-14

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 72.08  E-value: 4.19e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    65 TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL--VATLVMPFSLANELMAYWyfGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd14964  12 GLLGNLLVLLSLVRLRKRPRSTRLLLASLAACDLLasLVVLVLFFLLGLTEASSR--PQALCYLIYLLWYGANLASIWTT 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDgaaYPQCGLNDETW-----YILSSCIG 217
Cdd:cd14964  90 LVLTYHRYFALCGPLKYTRLSSPGKTRVIILGCWGVSLLLSIPPLVGKGAIPR---YNTLTGSCYLIcttiyLTWGFLLV 166
                       170       180
                ....*....|....*....|....*
gi 178194   218 SFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd14964 167 SFLLPLVAFLVIFSRIVLRLRRRVR 191
7tmA_Mel1C cd15401
melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G ...
60-248 4.93e-14

melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320523 [Multi-domain]  Cd Length: 279  Bit Score: 72.25  E-value: 4.93e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15401   9 FTIVVDVLGNLLVILSVLRNKKLRNAGNIFVVSLSVADLVVAVYPYPLILLAIFHNGWTLGNIHCQISGFLMGLSVIGSV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYpQCGLND--ETWYILSSCIG 217
Cdd:cd15401  89 FNITAIAINRYCYICHSLRYDKLYNMKKTCCYVCLTWVLTLAAIVPNFFVGSLQYDPRIY-SCTFAQtvSSSYTITVVVV 167
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   218 SFFAPCLIMGLVYARIYRV---AKRRTRTLSEKR 248
Cdd:cd15401 168 HFIVPLSIVTFCYLRIWVLviqVKHRVRQDSKQK 201
7tmA_NOFQ_opioid_R cd15092
nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G ...
60-188 6.36e-14

nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The nociceptin (NOP) receptor binds nociceptin or orphanin FQ, a 17 amino acid endogenous neuropeptide. The NOP receptor is involved in the modulation of various brain activities including instinctive and emotional behaviors. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320220 [Multi-domain]  Cd Length: 279  Bit Score: 71.82  E-value: 6.36e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15092   7 YLIVCVVglVGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDIFLGFWPFGNALCKTVIAIDYYNMFT 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15092  86 STFTLTAMSVDRYVAICHPIKALDVRTPHKAKVVNVCIWALASVVGVPVMV 136
7tmA_NPBWR cd15087
neuropeptide B/W receptors, member of the class A family of seven-transmembrane G ...
68-205 8.93e-14

neuropeptide B/W receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide B/W receptor 1 and 2 are members of the class A G-protein coupled receptors that bind the neuropeptides B and W, respectively. NPBWR1 (previously known as GPR7) is expressed predominantly in cerebellum and frontal cortex, while NPBWR2 (previously known as GPR8) is located mostly in the frontal cortex and is present in human, but not in rat and mice. These receptors are suggested to be involved in the regulation of food intake, neuroendocrine function, and modulation of inflammatory pain, among many others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320215 [Multi-domain]  Cd Length: 282  Bit Score: 71.31  E-value: 8.93e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15087  17 GNTAVIYVILRAPKMKTVTNVFILNLAIADDLF-TLVLPINIAEHLLQQWPFGELLCKLILSIDHYNIFSSIYFLTVMSV 95
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 178194   148 DRYWSVTQAVEYnlKRTPRRV----KATIVAVWLISAVISFPPLV--SLYRQPDGaaYPQCGLN 205
Cdd:cd15087  96 DRYLVVLATVRS--RRMPYRTyraaKIVSLCVWLLVTIIVLPFTVfaGVYSNELG--RKSCVLS 155
7tmA_Adenosine_R_A1 cd15071
adenosine receptor subtype A1, member of the class A family of seven-transmembrane G ...
63-187 1.03e-13

adenosine receptor subtype A1, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine A1 receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand. The A1 receptor has primarily inhibitory function on the tissues in which it is located. The A1 receptor slows metabolic activity in the brain and has a strong anti-adrenergic effects in the heart. Thus, it antagonizes beta1-adrenergic receptor-induced stimulation and thereby reduces cardiac contractility. The A1 receptor preferentially couples to G proteins of the G(i/o) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels.


Pssm-ID: 341323 [Multi-domain]  Cd Length: 290  Bit Score: 71.42  E-value: 1.03e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFgqvWCGVYLALDVLFCT-SSIVH 141
Cdd:cd15071  12 LVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAIIINIGPQTEF---YSCLMVACPVLILTqSSILA 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15071  89 LLAIAVDRYLRVKIPTRYKSVVTPRRAAVAIAGCWILSFLVGLTPM 134
7tmA_GnRHR-like cd15195
gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A ...
61-243 1.28e-13

gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Gonadotropin-releasing hormone (GnRH) and adipokinetic hormone (AKH) receptors share strong sequence homology to each other, suggesting that they have a common evolutionary origin. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flying, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320323 [Multi-domain]  Cd Length: 293  Bit Score: 71.27  E-value: 1.28e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15195  10 LFVISAAGNLTVLIQLFRRRRAKSHIQILIMHLALADLMVTFFNMPMDAVWNYTVEWLAGDLMCRVMMFLKQFGMYLSSF 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRtpRRVKATIVAVWLISAVISFPPLV---SLYRQPDGAAYPQC-------GLNDETWY 210
Cdd:cd15195  90 MLVVIALDRVFAILSPLSANQAR--KRVKIMLTVAWVLSALCSIPQSFifsVLRKMPEQPGFHQCvdfgsapTKKQERLY 167
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARI-YRVAKRRTRT 243
Cdd:cd15195 168 YFFTMILSFVIPLIITVTCYLLIlFEISKMAKRA 201
7tmA_CCK-AR cd15978
cholecystokinin receptor type A, member of the class A family of seven-transmembrane G ...
60-240 1.83e-13

cholecystokinin receptor type A, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320644 [Multi-domain]  Cd Length: 278  Bit Score: 70.67  E-value: 1.83e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15978   9 LIFLLSVLGNSLIIAVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFTLIPNLLKDFIFGSAVCKTATYFMGISVSVST 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP-----PLVSLYRQPDGAAyPQCGL---ND---ET 208
Cdd:cd15978  89 FNLVAISLERYSAICKPLKSRVWQTKSHALKVIAATWCLSFTIMLPypiysNLVPFTRINNSTG-NMCRLlwpNDvtqQS 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 178194   209 WYILSSCIgSFFAPCLIM----GLVYARIYR-----VAKRR 240
Cdd:cd15978 168 WYIFLLLI-LFLIPGIVMmtayGLISLELYRgikflMAKKR 207
7tmA_Mel1A cd15402
melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
60-253 2.01e-13

melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320524 [Multi-domain]  Cd Length: 279  Bit Score: 70.32  E-value: 2.01e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15402   9 FTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLTSIFHNGWNLGYLHCQISGFLMGLSVIGSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYpQCGLND--ETWYILSSCIG 217
Cdd:cd15402  89 FNITGIAINRYCYICHSLKYDKLYSDKNSLCYVLLIWVLTVAAIVPNLFVGSLQYDPRIY-SCTFAQsvSSAYTIAVVFF 167
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   218 SFFAPCLIMGLVYARIY-RVAKRRTRTLSEKRAPVGP 253
Cdd:cd15402 168 HFILPIIIVTFCYLRIWiLVIQVRRRVKPDNKPKLKP 204
7tmA_RNL3R cd14976
relaxin-3 like peptide receptors, member of the class A family of seven-transmembrane G ...
60-251 2.15e-13

relaxin-3 like peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This G protein-coupled receptor subfamily is composed of the relaxin-3 like peptide receptors, RNL3R1 and RNL3R2, and similar proteins. The relaxin-3 like peptide family includes relaxin-1, -2, -3, as well as insulin-like (INSL) peptides 3 to 6. RNL3/relaxin-3 and INSL5 are the endogenous ligands for RNL3R1 and RNL3R2, respectively. RNL3R1, also called GPCR135 or RXFP3, is predominantly expressed in the brain and is implicated in stress, anxiety, feeding, and metabolism. Insulin-like peptide 5 (INSL5), the endogenous ligand for RNL3R2 (also called GPCR142 or RXFP4), plays a role in fat and glucose metabolism. INSL5 is highly expressed in human rectal and colon tissues. Both RNL3R1 and RNL3R2 signal through G(i) protein and inhibit adenylate cyclase, thereby inhibit cAMP accumulation. RNL3R1 is shown to activate Erk1/2 signaling pathway.


Pssm-ID: 320107 [Multi-domain]  Cd Length: 290  Bit Score: 70.61  E-value: 2.15e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVvIAVLTSRALRAPQ---NLFLVSLASADILVAtLVMPF-SLANELMAYWYFGQVWCGVYLALDVL 133
Cdd:cd14976   7 YMVVFTVglLGNLLV-LYLLKSNKKLRQQsesNKFVFNLALTDLIFV-LTLPFwAVEYALDFVWPFGTAMCKVVRYVTKL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   134 FCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV-------------SLYRQPDGAAyp 200
Cdd:cd14976  85 NMYSSIFFLTALSVTRYIAVARALKHGWIRKAFGAFATTIAIWAAAALAAIPEAIfstdtwssvnhtlCLLRFPKNSS-- 162
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 178194   201 qcGLNDETW---YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPV 251
Cdd:cd14976 163 --VTRWYNWlgmYQLQKVVLGFFLPLGIITLSYLLLLRFLQRKRGGSKRRKSRV 214
7tmA_ET_R-like cd14977
endothelin receptors and related proteins, member of the class A family of seven-transmembrane ...
61-208 2.41e-13

endothelin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes endothelin receptors, bombesin receptor subtype 3 (BRS-3), gastrin-releasing peptide receptor (GRPR), neuromedin B receptor (NMB-R), endothelin B receptor-like 2 (ETBR-LP-2), and GRP37. The endothelin receptors and related proteins are members of the seven transmembrane rhodopsin-like G-protein coupled receptor family (class A GPCRs) which activate multiple effectors via different types of G protein.


Pssm-ID: 320108 [Multi-domain]  Cd Length: 292  Bit Score: 70.14  E-value: 2.41e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd14977   8 LVIFAVgiIGNLMVLCIVCTNYYMRSVPNILIASLALGDLLLLLLCVPLNAYNLLTKDWLFGDVMCKLVPFIQVTSLGVT 87
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL----YRQPDGAAYPQCGLNDET 208
Cdd:cd14977  88 VFSLCALSIDRYRAAVNSMPMQTIGACLSTCVKLAVIWVGSVLLAVPEAVLStvarESSLDNSSLTVCIMKPST 161
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
61-239 2.69e-13

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 69.87  E-value: 2.69e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15215   9 FLCASLFGNIVLLLVFQRKPQLLQVANRFIFNLLVADLLQTVLVMPWVIATSVPLFWPLDSHLCTALVVLMHLFAFAGVN 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPlvsLYRQPDGAAYPQCGLNDETW-----YILSSC 215
Cdd:cd15215  89 TIVVVSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWIVSVLQSTPP---LYGWGQAAFDERNALCSVIWgssysYTILSV 165
                       170       180
                ....*....|....*....|....
gi 178194   216 IGSFFAPCLIMGLVYARIYRVAKR 239
Cdd:cd15215 166 VSSFVLPVIIMLACYSMVFRAARR 189
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
61-277 2.88e-13

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 70.15  E-value: 2.88e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGV--YLALDVLFCTSS 138
Cdd:cd15197  10 LFVFIVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCVGLINVLTDIIWRITVEWRAGDFACKVirYLQVVVTYASTY 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IvhLCAISLDRYWSVTQAVeyNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLN---DETWYILSSC 215
Cdd:cd15197  90 V--LVALSIDRYDAICHPM--NFSQSGRQARVLICVAWILSALFSIPMLIIFEKTGLSNGEVQCWILwpePWYWKVYMTI 165
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 178194   216 IGS--FFAPCLIMGLVYARIYRVAKRRTRTLsekrapvgpdgaspTTENGLGAAAGEARTGTAR 277
Cdd:cd15197 166 VAFlvFFIPATIISICYIIIVRTIWKKSKIQ--------------VTINKAGLHDGSSRRSSSR 215
7tmA_Anaphylatoxin_R-like cd14974
anaphylatoxin receptors and related G protein-coupled chemokine receptors, member of the class ...
62-251 3.94e-13

anaphylatoxin receptors and related G protein-coupled chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes anaphylatoxin receptors, formyl peptide receptors (FPR), prostaglandin D2 receptor 2, GPR1, and related chemokine receptors. The anaphylatoxin receptors are a group of G-protein coupled receptors that bind anaphylatoxins. The members of this group include C3a and C5a receptors. The formyl peptide receptors (FPRs) are chemoattractant GPCRs that involved in mediating immune responses to infection. They are expressed mainly on polymorphonuclear and mononuclear phagocytes and bind N-formyl-methionyl peptides (FMLP), which are derived from the mitochondrial proteins of ruptured host cells or invading pathogens. Chemokine receptor-like 1 (also known as chemerin receptor 23) is a GPCR for the chemoattractant adipokine chemerin, also known as retinoic acid receptor responder protein 2 (RARRES2), and for the omega-3 fatty acid derived molecule resolvin E1. Interaction with chemerin induces activation of the MAPK and PI3K signaling pathways leading to downstream functional effects, such as a decrease in immune responses, stimulation of adipogenesis, and angiogenesis. On the other hand, resolvin E1 negatively regulates the cytokine production in macrophages by reducing the activation of MAPK1/3 and NF-kB pathways. Prostaglandin D2 receptor, also known as CRTH2, is a chemoattractant G-protein coupled receptor expressed on T helper type 2 cells that binds prostaglandin D2 (PGD2). PGD2 functions as a mast cell-derived mediator to trigger asthmatic responses and also causes vasodilation. PGD2 exerts its inflammatory effects by binding to two G-protein coupled receptors, the D-type prostanoid receptor (DP) and PD2R2 (CRTH2). PD2R2 couples to the G protein G(i/o) type which leads to a reduction in intracellular cAMP levels and an increase in intracellular calcium. GPR1 is an orphan receptor that can be activated by the leukocyte chemoattractant chemerin, thereby suggesting that some of the anti-inflammatory actions of chemerin may be mediated through GPR1.


Pssm-ID: 320105 [Multi-domain]  Cd Length: 274  Bit Score: 69.25  E-value: 3.94e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVvIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd14974  11 FLLGLPGNGLV-IWVAGFKMKRTVNTVWFLNLALAD-FLFCLFLPFLIVYIAMGHhWPFGSVLCKLNSFVISLNMFASVF 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQ----PDGAAY-PQCGLND------ETW 209
Cdd:cd14974  89 LLTAISLDRCLLVLHPVWAQNHRTVRLASVVCVGIWILALVLSVPYFV--FRDtvthHNGRSCnLTCVEDYdlrrsrHKA 166
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 178194   210 YILSSCIGSFFAPCLIMGLVYARIyrVAKRRTRTLSEKRAPV 251
Cdd:cd14974 167 LTVIRFLCGFLLPLLIIAICYSVI--AVKLRRKRLAKSSKPL 206
7tmA_NMU-R cd15133
neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled ...
60-185 4.99e-13

neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320261 [Multi-domain]  Cd Length: 298  Bit Score: 69.48  E-value: 4.99e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCT 136
Cdd:cd15133   7 YLLIFVVgvVGNVLTCLVIARHKAMRTPTNYYLFSLAVSDLLVLLLGMPLELYELWQNYpFLLGSGGCYFKTFLFETVCL 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15133  87 ASILNVTALSVERYIAVVHPLAARTCSTRPRVTRVLGCVWGVSMLCALP 135
7tmA_NMU-R1 cd15358
neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G ...
60-257 5.21e-13

neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320480 [Multi-domain]  Cd Length: 305  Bit Score: 69.41  E-value: 5.21e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCT 136
Cdd:cd15358   7 YLLIFVVgaVGNGLTCIVILRHKVMRTPTNYYLFSLAVSDLLVLLLGMPLELYEMWSNYpFLLGAGGCYFKTLLFETVCF 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP----------PLVSLYRQPDGAAypqCGLND 206
Cdd:cd15358  87 ASILNVTALSVERYIAVVHPLKAKYVVTRTHAKRVIGAVWVVSILCSIPntslhgifqlTVPCRGPVPDSAT---CMLVK 163
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*
gi 178194   207 ETWY----ILSSCIGSFFAPCLIMGLVYARIyRVAKRRTRTLSEKRAPVGPDGAS 257
Cdd:cd15358 164 PRWMynliIQITTLLFFFLPMGTISVLYLLI-GLQLKREKMLLVLEAKGSKAGDS 217
7tmA_CCR7 cd15175
CC chemokine receptor type 7, member of the class A family of seven-transmembrane G ...
66-235 5.96e-13

CC chemokine receptor type 7, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR7 is a major homeostatic receptor responsible for lymph node development and effective adaptive immune responses and plays a critical role in trafficking of dendritic cells and B and T lymphocytes. Its only two ligands, CCL and CCl21, are primarily produced by stromal cells in the T cell zones of lymph nodes and spleen. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. The CC chemokine receptors are all activating the G protein Gi.


Pssm-ID: 341331 [Multi-domain]  Cd Length: 278  Bit Score: 69.02  E-value: 5.96e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANeLMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15175  15 LLGNGLVILTYIYFKRLKTMTDIYLLNLALADILFL-LTLPFWAAS-AAKKWVFGEEMCKAVYCLYKMSFFSGMLLLMCI 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEYNLKRtPRRV---KATIVAVWLISAVISFPPLV-SLYRQPDGAayPQCGLNDETWYILSSCIGS--- 218
Cdd:cd15175  93 SIDRYFAIVQAASAHRHR-SRAVfisKVSSLGVWVLAFILSIPELLySGVNNNDGN--GTCSIFTNNKQTLSVKIQIsqm 169
                       170       180
                ....*....|....*....|
gi 178194   219 ---FFAPCLIMGLVYARIYR 235
Cdd:cd15175 170 vlgFLVPLVVMSFCYSVIIK 189
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
60-235 6.00e-13

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 69.08  E-value: 6.00e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSR-ALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15097   7 FSLIFLLgtVGNSLVLAVLLRSGqSGHNTTNLFILNLSVADLCFILFCVPFQATIYSLEGWVFGSFLCKAVHFFIYLTMY 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLvSLYRQPDGAAYPQC--GLNDETWYILSS 214
Cdd:cd15097  87 ASSFTLAAVSVDRYLAIRYPLRSRELRTPRNAVAAIALIWGLSLLFAGPYL-SYYDLIDYANSTVCmpGWEEARRKAMDT 165
                       170       180
                ....*....|....*....|...
gi 178194   215 C--IGSFFAPCLIMGLVYARIYR 235
Cdd:cd15097 166 CtfAFGYLIPVLVVSLSYTRTIK 188
7tmA_Mel1B cd15400
melatonin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
60-253 6.52e-13

melatonin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320522 [Multi-domain]  Cd Length: 279  Bit Score: 68.73  E-value: 6.52e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15400   9 FTTVVDILGNLLVIISVFRNRKLRNSGNVFVVSLALADLVVALYPYPLVLVAIFHNGWALGEMHCKVSGFVMGLSVIGSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYpQCGLND--ETWYILSSCIG 217
Cdd:cd15400  89 FNITGIAINRYCYICHSFAYDKLYSRWNTLLYVCLIWALTVVAIVPNFFVGSLEYDPRIY-SCTFVQtaSSSYTIAVVVI 167
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   218 SFFAPCLIMGLVYARIY-RVAKRRTRTLSEKRAPVGP 253
Cdd:cd15400 168 HFIVPITVVSFCYLRIWvLVIQVRRKVKSESKPRLKP 204
7tmA_SSTR2 cd15971
somatostatin receptor type 2, member of the class A family of seven-transmembrane G ...
68-248 7.47e-13

somatostatin receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin, a polypeptide hormone that regulates a wide variety of physiological such as neurotransmission, endocrine secretion, cell proliferation, and smooth muscle contractility. SSTRs are composed of five distinct subtypes (SSTR1-5) which are encoded by separate genes on different chromosomes. SSTR2 plays critical roles in growth hormone secretion, glucagon secretion, and immune responses. SSTR2 is expressed in the normal human pituitary and in nearly all pituitary growth hormone adenomas.


Pssm-ID: 320637 [Multi-domain]  Cd Length: 279  Bit Score: 68.72  E-value: 7.47e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15971  17 GNTLVIYVILRYAKMKTVTNIYILNLAIADELF-MLGLPFLAIQVALVHWPFGKAICRVVMTVDGINQFTSIFCLTVMSI 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAyPQCGL----NDETWY---ILSSCIGSFF 220
Cdd:cd15971  96 DRYLAVVHPIKSAKWRKPRTAKMINMAVWGVSLLVILPIMIYAGVQTKHGR-SSCTIiwpgESSAWYtgfIIYTFILGFF 174
                       170       180
                ....*....|....*....|....*....
gi 178194   221 APCLIMGLVYAR-IYRVAKRRTRTLSEKR 248
Cdd:cd15971 175 VPLTIICLCYLFiIIKVKSSGIRVGSSKR 203
7tmA_CXCR6 cd15173
CXC chemokine receptor type 6, member of the class A family of seven-transmembrane G ...
60-233 7.62e-13

CXC chemokine receptor type 6, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR6 binds specifically to the chemokine CXCL16, which is expressed on dendritic cells, monocyte/macrophages, activated T cells, fibroblastic reticular cells, and cancer cells. CXCR6 is phylogenetically more closely related to CC-type chemokine receptors (CCR6 and CCR9) than other CXC receptors. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 320301 [Multi-domain]  Cd Length: 270  Bit Score: 68.64  E-value: 7.62e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFsLANELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15173   9 VMFVTGLVGNSLVIVIYIFYEKLRTLTDIFLVNLAVADLLfLCTL--PF-WAYSAAHEWIFGTVMCKITNGLYTINLYSS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRV--KATIVAVWLISAVISFPPLV-SLYRQPD----GAAYPQCGLndETWYI 211
Cdd:cd15173  86 MLILTCITVDRFIVIVQATKAHNCHAKKMRwgKVVCTLVWVISLLLSLPQFIySEVRNLSskicSMVYPPDAI--EVVVN 163
                       170       180
                ....*....|....*....|..
gi 178194   212 LSSCIGSFFAPCLIMGLVYARI 233
Cdd:cd15173 164 IIQMTVGFFLPLLAMIICYSVI 185
7tmA_CCR10 cd15177
CC chemokine receptor type 10, member of the class A family of seven-transmembrane G ...
60-236 8.86e-13

CC chemokine receptor type 10, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR10 is a homeostatic receptor specific for two C-C motif chemokines, CCL27 and CCL28. Activation of CCR10 by its two ligands mediates diverse activities, ranging from leukocyte trafficking to skin cancer. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. The CC chemokine receptors are all activating the G protein Gi.


Pssm-ID: 341332 [Multi-domain]  Cd Length: 280  Bit Score: 68.65  E-value: 8.86e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFT--VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELMAyWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15177   7 YLVVFVlgLVGNGLVLATHTRYRRLRSMTDVYLLNLALADLLLL-LTLPFAAAETLQG-WIFGNAMCKLIQGLYAINFYS 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKR--TPRRVKATIVAVWLISAVISFPPLV--------SLYR----QPDGAAYPQCG 203
Cdd:cd15177  85 GFLFLTCISVDRYVVIVRATSAHRLRpkTLFYSVLTSLIVWLLSILFALPQLIysrvenrsELSScrmiFPEVVSRTVKG 164
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   204 LNDETWYILSSCIgsffaPCLIMGLVYARIYRV 236
Cdd:cd15177 165 ATALTQVVLGFAI-----PLIVMAVCYAAIGRT 192
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
60-243 9.02e-13

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 68.03  E-value: 9.02e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGV--YLALDVLFCTS 137
Cdd:cd15196   9 TILVLALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALFNVLPQLIWDITYRFYGGDLLCRLvkYLQVVGMYASS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIvhLCAISLDRYwsvtQAVEY---NLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDET-----W 209
Cdd:cd15196  89 YV--LVATAIDRY----IAICHplsSHRWTSRRVHLMVAIAWVLSLLLSIPQLFIFSYQEVGSGVYDCWATFEPpwglrA 162
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   210 YILSSCIGSFFAPCLIMGLVYARI-YRVAKRRTRT 243
Cdd:cd15196 163 YITWFTVAVFVVPLIILAFCYGRIcYVVWRAKIKT 197
7tmA_SSTR4 cd15973
somatostatin receptor type 4, member of the class A family of seven-transmembrane G ...
66-233 9.16e-13

somatostatin receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR4 plays a critical role in mediating inflammation. Unlike other SSTRs, SSTR4 subtype is not detected in all pituitary adenomas while it is expressed in the normal human pituitary.


Pssm-ID: 320639 [Multi-domain]  Cd Length: 274  Bit Score: 68.34  E-value: 9.16e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15973  15 LIGNSMVIFVILRYAKMKTATNIYILNLAIADELF-MLSVPFLAASAALQHWPFGSAMCRTVLSVDGINMFTSVFCLTVL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGL--NDETW---YILSSCIGSFF 220
Cdd:cd15973  94 SVDRYIAVVHPLRAARYRRPTVAKMINICVWILSLLVISPIIIFADTATRKGQAVACNLiwPHPAWsaaFVIYTFLLGFL 173
                       170
                ....*....|...
gi 178194   221 APCLIMGLVYARI 233
Cdd:cd15973 174 LPVLAIGLCYILI 186
7tmA_MCHR2 cd15339
melanin concentrating hormone receptor 2, member of the class A family of seven-transmembrane ...
66-233 1.22e-12

melanin concentrating hormone receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320461 [Multi-domain]  Cd Length: 283  Bit Score: 67.92  E-value: 1.22e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPqNLFLVSLASADiLVATLVMPFsLANELM--AYWYFGQVWCGVYLALDVL--FCTSSIVh 141
Cdd:cd15339  15 LVGNILVLFTIIRSRKKTVP-DIYVCNLAVAD-LVHIIVMPF-LIHQWArgGEWVFGSPLCTIITSLDTCnqFACSAIM- 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 lCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDG---AAYPQCGLNDETWYILSSCI 216
Cdd:cd15339  91 -TAMSLDRYIALVHPFRLTSLRTRSKTIRINLLVWAASFILVLPVWVyaKVIKFRDGlesCAFNLTSPDDVLWYTLYQTI 169
                       170
                ....*....|....*..
gi 178194   217 GSFFAPCLIMGLVYARI 233
Cdd:cd15339 170 TTFFFPLPLILICYILI 186
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
60-242 1.48e-12

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 68.13  E-value: 1.48e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCgVYLALDVLFCTS- 137
Cdd:cd15134   9 IIFVTGVVGNLCTCIVIARNRSMHTATNYYLFSLAVSDLLLLILGLPFELYTIWQQYpWVFGEVFC-KLRAFLSEMSSYa 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP------------PLVSLYRQPDGA--AYPQCG 203
Cdd:cd15134  88 SVLTITAFSVERYLAICHPLRSHTMSKLSRAIRIIIAIWIIAFVCALPfaiqtrivyleyPPTSGEALEESAfcAMLNEI 167
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 178194   204 LNDETWYILSSCIgSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15134 168 PPITPVFQLSTFL-FFIIPMIAIIVLYVLIGLQLRRSTL 205
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
60-186 1.58e-12

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 68.25  E-value: 1.58e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15005   9 LILCVSLAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPFVMASVRHGSgWIYGALSCKVIAFLAVLFCFHS 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPP 186
Cdd:cd15005  89 AFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAFPP 136
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
63-187 2.29e-12

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 67.50  E-value: 2.29e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15205  12 VLALFGNSLVIYVVTRKRAMRTATNIFICSLALSDLLITFFCIPFTLLQNISSNWLGGAFMCKMVPFVQSTAVVTSILTM 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15205  92 TCIAVERHQGIVHPLKMKWQYTNRRAFTMLGLVWIVSVIVGSPML 136
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
61-240 2.40e-12

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 67.07  E-value: 2.40e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFT-VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15394   9 LVVLVgVVGNYLLIYVICRTKKMHNVTNFLIGNLAFSDMLMCATCVPLTLAYAFEPRgWVFGRFMCYFVFLMQPVTVYVS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWsvtqAVEYNLK-RTPRRVKATIVA-VWLISAVISFPPLVSLYRqpdgAAYPQCGLN--DETW----- 209
Cdd:cd15394  89 VFTLTAIAVDRYY----VTVYPLRrRISRRTCAYIVAaIWLLSCGLALPAAAHTYY----VEFKGLDFSicEEFWfgqek 160
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   210 ----YILSSCIGSFFAPCLIMGLVYARIYRVAKRR 240
Cdd:cd15394 161 qrlaYACSTLLITYVLPLLAISLSYLRISVKLRNR 195
7tmA_NPFFR1 cd15981
neuropeptide FF receptor 1, member of the class A family of seven-transmembrane G ...
60-190 3.10e-12

neuropeptide FF receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320647 [Multi-domain]  Cd Length: 299  Bit Score: 67.16  E-value: 3.10e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15981   9 FIFLLCMVGNGLVCFIVLKNRQMRTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGWPFDNAMCKMSGLVQGMSVSASV 88
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 178194   140 VHLCAISLDRYWSVTQAveYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd15981  89 FTLVAIAVERFRCIVHP--FRQKLTLRKAIVTIVIIWVLALIIMCPSAVTL 137
7tmA_tmt_opsin cd15086
teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G ...
60-242 3.13e-12

teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G protein-coupled receptors; Teleost multiple tissue (tmt) opsins are homologs of encephalopsin. Mouse encephalopsin (or panopsin) is highly expressed in the brain and testes, whereas the teleost homologs are localized to multiple tissues. The exact functions of the encephalopsins and tmt-opsins are unknown. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Tmt opsins belong to the class A of the G protein-coupled receptors and show strong homology to the vertebrate visual opsins.


Pssm-ID: 320214 [Multi-domain]  Cd Length: 276  Bit Score: 66.68  E-value: 3.13e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15086   9 FILTFGFLNNLLVLVLFCKYKVLRSPINLLLLNISLSDLLVCVLGTPFSFAASTQGRWLIGEHGCRWYGFANSLFGIVSL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTpRRVKATIVAVWLISAVISFPPLVSLYRQ-PDGAAyPQCGLN------DETWYIL 212
Cdd:cd15086  89 ISLAVLSYERYCTLLRPTEADVSDY-RKAWLGVGGSWLYSLLWTLPPLLGWSSYgPEGPG-TTCSVQwtsrsaNSISYII 166
                       170       180       190
                ....*....|....*....|....*....|
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15086 167 CLFIFCLLLPFLVMVYCYGRLLYAIKQVGK 196
7tmA_SSTR1 cd15970
somatostatin receptor type 1, member of the class A family of seven-transmembrane G ...
68-188 3.50e-12

somatostatin receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR1 is coupled to a Na/H exchanger, voltage-dependent calcium channels, and AMPA/kainate glutamate channels. SSTR1 is expressed in the normal human pituitary and in nearly half of all pituitary adenoma subtypes.


Pssm-ID: 320636 [Multi-domain]  Cd Length: 276  Bit Score: 66.47  E-value: 3.50e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15970  17 GNSMVIYVILRYAKMKTATNIYILNLAIADELL-MLSVPFLVTSTLLRHWPFGSLLCRLVLSVDAINMFTSIYCLTVLSI 95
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15970  96 DRYIAVVHPIKAARYRRPTVAKMVNLGVWVFSILVILPIII 136
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
66-236 3.52e-12

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 66.32  E-value: 3.52e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRapQNLFLVSLASADILVATLVMPFSL--ANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLC 143
Cdd:cd15220  14 LVGNTAVMVVIAKTPHLR--KFAFVCHLCVVDLLAALLLMPLGIlsSSPFFLGVVFGEAECRVYIFLSVCLVSASILTIS 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS--LYRQPDGAAYPQCGLndetWYILSS------- 214
Cdd:cd15220  92 AISVERYYYIVHPMRYEVKMTIGLVAAVLVGVWVKALLLGLLPVLGwpSYGGPAPIAARHCSL----HWSHSGhrgvfvv 167
                       170       180
                ....*....|....*....|....
gi 178194   215 --CIGSFFAPCLIMGLVYARIYRV 236
Cdd:cd15220 168 lfALVCFLLPLLLILVVYCGVFKV 191
7tmA_XCR1 cd15182
XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
60-249 3.53e-12

XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; XCR1 is a chemokine receptor specific for XCL1 and XCL2 (previously called lymphotactin alpha/beta), which differ in only two amino acids. XCL1/2 is the only member of the C chemokine subfamily, which is unique as containing only two of the four cysteines that are found in other chemokine families. Human XCL1/2 has been shown to be secreted by activated CD8+ T cells and upon activation of the innate immune system. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling.


Pssm-ID: 341337 [Multi-domain]  Cd Length: 271  Bit Score: 66.62  E-value: 3.53e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFsLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15182   7 YYLVFLLslLGNGLVLWILVKYEKLKTLTNIFILNLAISD-LLFTFTLPF-WASYHSSGWIFGEILCKAVTSIFYIGFYS 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILSSCIG 217
Cdd:cd15182  85 SILFLTLMTIDRYLAVVHPLSALRSRKLRYASLVSVAVWVISILASLPELILSTVMKSDEDGSLCEYSSIKWKLGYYYQQ 164
                       170       180       190
                ....*....|....*....|....*....|....
gi 178194   218 S--FFAPCLIMGLVYARIYRvAKRRTRTLSEKRA 249
Cdd:cd15182 165 NlfFLIPLGIIVYCYVRILQ-TLMRTRTMRKHRT 197
7tmA_MCHR1 cd15338
melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane ...
66-233 5.79e-12

melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320460 [Multi-domain]  Cd Length: 282  Bit Score: 65.99  E-value: 5.79e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQN---LFLVSLASADILVaTLVMPFsLANELMA--YWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15338  15 IIGNSIVIYTIVKKSKFRCQQTvpdIFIFNLSIVDLLF-LLGMPF-LIHQLLGngVWHFGETMCTLITALDTNSQITSTY 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISaVISFPPL---VSLYRQPDGAAypQCGL---NDET---WYI 211
Cdd:cd15338  93 ILTVMTLDRYLATVHPIRSTKIRTPRVAVAVICLVWILS-LLSITPVwmyAGLMPLPDGSV--GCALllpNPETdtyWFT 169
                       170       180
                ....*....|....*....|..
gi 178194   212 LSSCIGSFFAPCLIMGLVYARI 233
Cdd:cd15338 170 LYQFFLAFALPLVVICVVYFKI 191
7tmA_Bombesin_R-like cd15927
bombesin receptor subfamily, member of the class A family of seven-transmembrane G ...
60-244 6.16e-12

bombesin receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This bombesin subfamily of G-protein coupled receptors consists of neuromedin B receptor (NMBR), gastrin-releasing peptide receptor (GRPR), and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple mainly to the G proteins of G(q/11) family. NMBR functions as the receptor for the neuropeptide neuromedin B, a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. Gastrin-releasing peptide is an endogenous ligand for GRPR and shares high sequence homology with NMB in the C-terminal region. Both NMB and GRP possess bombesin-like biochemical properties. BRS-3 is classified as an orphan receptor and suggested to play a role in sperm cell division and maturation. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. The bombesin receptor family belongs to the seven transmembrane rhodopsin-like G-protein coupled receptors (class A GPCRs), which perceive extracellular signals and transduce them to guanine nucleotide-binding (G) proteins.


Pssm-ID: 320593 [Multi-domain]  Cd Length: 294  Bit Score: 66.14  E-value: 6.16e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15927   7 FALIFLVgvLGNGTLILIFLRNKSMRNVPNIFILSLALGDLLLLLTCVPFTSTIYTLDSWPFGEFLCKLSEFLKDTSIGV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL----VSLYRQPDGAAYPQCGLNDETWYILS 213
Cdd:cd15927  87 SVFTLTALSADRYFAIVNPMRKHRSQATRRTLVTAASIWIVSILLAIPEAifshVVTFTLTDNQTIQICYPYPQELGPNY 166
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   214 SCIGS-------FFAPCLIMGLVYARIYRVAKRRTRTL 244
Cdd:cd15927 167 PKIMVllrflvyYLIPLLIIGVFYVLMARHLIRSTRNI 204
7tmA_GPR25 cd15193
G protein-coupled receptor 25, member of the class A family of seven-transmembrane G ...
60-235 7.57e-12

G protein-coupled receptor 25, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR25 is an orphan G-protein coupled receptor that shares strong sequence homology to GPR15 and the angiotensin II receptors. These closely related receptors form a group within the class A G-protein coupled receptors (GPCRs). GPR15 controls homing of T cells, especially FOXP3(+) regulatory T cells, to the large intestine mucosa and thereby mediates local immune homeostasis. Moreover, GRP15-deficient mice were shown to be prone to develop more severe large intestine inflammation. Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors.


Pssm-ID: 320321 [Multi-domain]  Cd Length: 279  Bit Score: 65.54  E-value: 7.57e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPF-SLANELMAYWYFGQVWCGVY-LALDVLFC 135
Cdd:cd15193   7 YLIIFFTglLGNLFVIALMSKRSTTKRLVDTFVLNLAVAD-LVFVLTLPFwAASTALGGQWLFGEGLCKLSsFIIAVNRC 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 tSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQPDGAAYpqCGLNDETWYI---- 211
Cdd:cd15193  86 -SSILFLTGMSVDRYLAVVKLLDSRPLRTRRCALITCCIIWAVSLVLGIPSLV--YRNLINESV--CVEDSSSRFFqgis 160
                       170       180
                ....*....|....*....|....
gi 178194   212 LSSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15193 161 LATLFLTFVLPLIVILFCYCSILV 184
7tmA_NPFFR2 cd15980
neuropeptide FF receptor 2, member of the class A family of seven-transmembrane G ...
60-195 1.06e-11

neuropeptide FF receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320646 [Multi-domain]  Cd Length: 299  Bit Score: 65.68  E-value: 1.06e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15980   7 YLLIFLLcmMGNGVVCFIVLRSKHMRTVTNLFILNLAISDLLVGIFCMPTTLLDNIIAGWPFGSTVCKMSGMVQGISVSA 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   138 SIVHLCAISLDRYWSVTQAveYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPD 195
Cdd:cd15980  87 SVFTLVAIAVDRFRCIVYP--FKQKLTISTAVVIIVIIWVLAIAIMCPSAVMLHVQEE 142
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
60-250 1.12e-11

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 65.19  E-value: 1.12e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15094   9 LICIVGLVGNGLVIYVVLRYAKMKTVTNLYILNLAVADECF-LIGLPFLIVTMILKYWPFGAAMCKIYMVLTSINQFTSS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAY------PQC-GLNDETWYIL 212
Cdd:cd15094  88 FTLTVMSADRYLAVCHPIRSMRYRTPFIAKVVCATTWSISFLVMLPIILYASTVPDSGRYsctivwPDSsAVNGQKAFTL 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 178194   213 SSCIGSFFAPCLIMGLVYA----RIYRVAKRRTRtlSEKRAP 250
Cdd:cd15094 168 YTFLLGFAIPLLLISVFYTlvilRLRTVGPKNKS--KEKRRS 207
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
60-230 1.31e-11

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 64.95  E-value: 1.31e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd16003   9 FVVAVAVFGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASMAAFNTLINFIYALHSEWYFGEAYCRFHNFFPITSVFASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPrrVKATIVAVWLISAVISFP------PLVSLYRQPDGAAYPQcGLNDETWYILS 213
Cdd:cd16003  89 YSMTAIAVDRYMAIIDPLKPRLSATA--TKVVIGSIWILAFLLAFPqclyskTKVMPGRTLCFVAWPG-GPDQHFTYHII 165
                       170
                ....*....|....*..
gi 178194   214 SCIGSFFAPCLIMGLVY 230
Cdd:cd16003 166 VIVLVYCLPLLVMGITY 182
7tmA_CCR8 cd15187
CC chemokine receptor type 8, member of the class A family of seven-transmembrane G ...
61-202 1.36e-11

CC chemokine receptor type 8, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR8, the receptor for the CC chemokines CCL1 and CC16, is highly expressed on allergen-specific T-helper type 2 cells, and is implicated in the pathogenesis of human asthma. CCL1- and CCR8-expressing CD4+ effector T lymphocytes are shown to have a critical role in lung mucosal inflammatory responses. CCR8 is also a functional receptor for CCL16, a liver-expressed CC chemokine that involved in attracting lymphocytes, dendritic cells, and monocytes. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 320315 [Multi-domain]  Cd Length: 276  Bit Score: 64.82  E-value: 1.36e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFsLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15187  10 LFVFGLLGNSLVIWVLVACKKLRSMTDVYLLNLAASD-LLFVFSLPF-QAYYLLDQWVFGNAMCKIVSGAYYIGFYSSMF 87
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   141 HLCAISLDRYWSVTQAVeYNLK-RTPRRVKATIVAVWLISAVISFPPLVsLYRQPDGAAYPQC 202
Cdd:cd15187  88 FITLMSIDRYLAIVHAV-YALKvRTASHGTILSLALWLVAILASVPLLV-FYQVASEDGRLQC 148
7tmA_ACKR4_CCR11 cd15176
atypical chemokine receptor 4, member of the class A family of seven-transmembrane G ...
62-242 1.49e-11

atypical chemokine receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; ACKR4 was first reported to bind several CC chemokines including CCL19, CCL21, and CCL25 and was originally designated CCR11. AKCR4 is unable to couple to G-protein and, instead, it preferentially mediates beta-arrestin dependent processes, such as receptor internalization, after ligand binding. Thus, ACKR4 may act as a scavenger receptor to suppress the effects of proinflammatory chemokines. Unlike the classical chemokine receptors that contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 320304 [Multi-domain]  Cd Length: 276  Bit Score: 64.76  E-value: 1.49e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAyWYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15176  11 LVVGLAGNSLVVAIYAYYKKLKTKTDVYILNLAVADLLL-LFTLPFWAADAVNG-WVLGTAMCKITSALYTMNFSCGMQF 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVkaTIVAVWLISAVISFPPLV------SLYRQPDGAAYPQ--CGLNDETWYILS 213
Cdd:cd15176  89 LACISVDRYVAITKATSRQFTGKHCWI--VCLCVWLLAILLSIPDLVfstvreNSDRYRCLPVFPPslVTSAKATIQILE 166
                       170       180
                ....*....|....*....|....*....
gi 178194   214 SCIGsFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15176 167 VLLG-FVLPFLVMVFCYSRVARALSRTPN 194
7tmA_NMBR cd15125
neuromedin B receptor, member of the class A family of seven-transmembrane G protein-coupled ...
60-188 1.58e-11

neuromedin B receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin B receptor (NMBR), also known as BB1, is a G-protein coupled receptor whose endogenous ligand is the neuropeptide neuromedin B. Neuromedin B is a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. NMBR is widely distributed in the CNS, with especially high levels in olfactory nucleus and thalamic regions. The receptor couples primarily to a pertussis-toxin-insensitive G protein of the Gq/11 family, which leads to the activation of phospholipase C. NMBR belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include gastrin-releasing peptide receptor (GRPR) and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin.


Pssm-ID: 320253 [Multi-domain]  Cd Length: 292  Bit Score: 64.97  E-value: 1.58e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15125   7 YLLIITVglLGNITLVKIFITNSAMRSVPNIFISSLAAGDLLLLVTCVPVDASRYFYEEWMFGTVGCKLIPVIQLTSVGV 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15125  87 SVFTLTALSADRYKAIVNPMDIQTSSAVLRTCLKAIAIWVVSVLLAVPEAV 137
7tmA_prokineticin-R cd15204
prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
67-240 2.14e-11

prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Prokineticins 1 (PROK1) and 2 (PROK2), also known as endocrine gland vascular endothelial factor and Bombina varigata 8, respectively, are multifunctional chemokine-like peptides that are highly conserved across species. Prokineticins can bind with similar affinities to two closely homologous 7-transmembrane G protein coupled receptors, PROKR1 and PROKR2, which are phylogenetically related to the tachykinin receptors. Prokineticins and their GPCRs are widely distributed in human tissues and are involved in numerous physiological roles, including gastrointestinal motility, generation of circadian rhythms, neuron migration and survival, pain sensation, angiogenesis, inflammation, and reproduction. Moreover, different point mutations in genes encoding PROK2 or its receptor (PROKR2) can lead to Kallmann syndrome, a disease characterized by delayed or absent puberty and impaired olfactory function.


Pssm-ID: 320332 [Multi-domain]  Cd Length: 288  Bit Score: 64.60  E-value: 2.14e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    67 VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSL----ANELMayWYFGQVWCGV--YLALDVLFCtsSIV 140
Cdd:cd15204  16 VGNLLLIAVLARYKKLRTLTNLLIANLALSDFLVAVFCLPFEMdyyvVRQRS--WTHGDVLCAVvnYLRTVSLYV--STN 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAveYNLKRTPRRVKATIVAVWLISAVISFPP-----LVSLYRQPD---GAAYPQCGLNDETWYIL 212
Cdd:cd15204  92 ALLVIAIDRYLVIVHP--LKPRMKRRTACVVIALVWVVSLLLAIPSavyskTTPYANQGKifcGQIWPVDQQAYYKAYYL 169
                       170       180
                ....*....|....*....|....*....
gi 178194   213 SSCIGSFFAPCLIMGLVYARI-YRVAKRR 240
Cdd:cd15204 170 FLFVLEFVLPVLIMTLCYLRIvRKVWFRR 198
7tmA_GHSR cd15131
growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G ...
60-242 4.31e-11

growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Growth hormone secretagogue receptor, GHSR, is also known as GH-releasing peptide receptor (GHRP) or Ghrelin receptor. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin, also called hunger hormone, is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. It also plays a role in the cardiovascular, immune, and reproductive systems. GHSR couples to G-alpha-11 proteins. Both ghrelin and GHSR are expressed in a wide range of cancer tissues. Recent studies suggested that ghrelin may play a role in processes associated with cancer progression, including cell proliferation, metastasis, apoptosis, and angiogenesis.


Pssm-ID: 320259 [Multi-domain]  Cd Length: 291  Bit Score: 63.75  E-value: 4.31e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLAnELMAY--WYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15131   9 LLFVVGVTGNLMTMLVVSKYRDMRTTTNLYLSSMAFSDLLI-FLCMPLDLY-RLWQYrpWNFGDLLCKLFQFVSESCTYS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYP----QCglnDETWYILS 213
Cdd:cd15131  87 TILNITALSVERYFAICFPLRAKVVVTKRRVKLVILVLWAVSFLSAGPIFVLVGVEHENGTNPidtnEC---KATEYAVR 163
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   214 SCIGS---------FFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15131 164 SGLLTimvwvssvfFFLPVFCLTVLYSLIGRKLWRRRR 201
7tmA_GPR33 cd15120
orphan receptor GPR33, member of the class A family of seven-transmembrane G protein-coupled ...
99-188 5.07e-11

orphan receptor GPR33, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor GPR33, an orphan member of the chemokine-like receptor family, was originally identified as a pseudogene in humans as well as in several apes and rodent species. Although the intact GPR33 allele is still present in a small fraction of the human population, the human GPR33 contains a premature stop codon. The amino acid sequence of GPR33 shares a high degree of sequence identity with the members of the chemokine and chemoattractant receptors that control leukocyte chemotaxis. The human GPR33 is expressed in spleen, lung, heart, kidney, pancreas, thymus, gonads, and leukocytes.


Pssm-ID: 320248 [Multi-domain]  Cd Length: 282  Bit Score: 63.26  E-value: 5.07e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    99 LVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWL 177
Cdd:cd15120  46 LIFTLILPFMAVHVLMDNhWAFGTVLCKVLNSTLSVGMFTSVFLLTAISLDRYLLTLHPVWSRQHRTNRWASAIVLGVWI 125
                        90
                ....*....|.
gi 178194   178 ISAVISFPPLV 188
Cdd:cd15120 126 SAILLSIPYLA 136
7tmA_SKR_NK2R cd16004
substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
60-233 5.48e-11

substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The substance-K receptor (SKR), also known as tachykinin receptor 2 (TACR2) or neurokinin A receptor or NK2R, is a G-protein coupled receptor that specifically binds to neurokinin A. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320670 [Multi-domain]  Cd Length: 285  Bit Score: 63.32  E-value: 5.48e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd16004   9 LIVLVAVTGNATVIWIILAHRRMRTVTNYFIVNLALADLSMAAFNTAFNFVYASHNDWYFGLEFCRFQNFFPITAMFVSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTprRVKATIVAVWLISAVISFPP-LVSLYRQPDGA-----AYPQ-CGLNDETWYIL 212
Cdd:cd16004  89 YSMTAIAADRYMAIIHPFKPRLSAG--STKVVIAGIWLVALALAFPQcFYSTVTMDQGRtkcivAWPGdSGGKHQLTYHL 166
                       170       180
                ....*....|....*....|.
gi 178194   213 SSCIGSFFAPCLIMGLVYARI 233
Cdd:cd16004 167 AVIVLIYLLPLAVMFVTYSII 187
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
60-187 6.58e-11

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 63.43  E-value: 6.58e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAN-ELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15217   9 LIICVSLAGNLIVSLLVLKDRALHKAPYYFLLDLCLADTIRSAVCFPFVLVSiRNGSAWTYSVLSCKIVAFMAVLFCFHA 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15217  89 AFMLFCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWTLSVAMAFPPV 137
7tmA_GPR151 cd15002
G protein-coupled receptor 151, member of the class A family of seven-transmembrane G ...
66-242 9.47e-11

G protein-coupled receptor 151, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 151 (GRP151) is an orphan receptor of unknown function. Its expression is conserved in habenular axonal projections of vertebrates and may be a promising novel target for psychiatric drug development. GPR151 shows high sequence similarity with galanin receptors (GALR). GPR151 is a member of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320133 [Multi-domain]  Cd Length: 280  Bit Score: 62.43  E-value: 9.47e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVvIAVLTSRALRAPQNL---FLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15002  14 FAGNLMV-IGILLNNARKGKPSLidsLILNLSAADLLLLLFSVPFRAAAYSKGSWPLGWFVCKTADWFGHACMAAKSFTI 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAV-EYNLKrtPRRVKATIVAVWLISAVISFPP-LVSLYRQPDGAAYPQCGL-----NDETWYILSSC 215
Cdd:cd15002  93 AVLAKACYMYVVNPTkQVTIK--QRRITAVVASIWVPACLLPLPQwLFRTVKQSEGVYLCILCIpplahEFMSAFVKLYP 170
                       170       180
                ....*....|....*....|....*..
gi 178194   216 IGSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15002 171 LFVFCLPLTFALFYFWRAYGQCQRRGT 197
7tmA_CCR9 cd15174
CC chemokine receptor type 9, member of the class A family of seven-transmembrane G ...
60-235 1.00e-10

CC chemokine receptor type 9, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR9 is a homeostatic receptor specific for CCL25 (formerly known as thymus expressed chemokine) and is highly expressed on both immature and mature thymocytes as well as on intestinal homing T Lymphocytes and mucosal Lymphocytes. In cutaneous melanoma, activation of CCR9-CCL25 has been shown to stimulate metastasis to the small intestine. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. The CC chemokine receptors are all activating the G protein Gi.


Pssm-ID: 320302 [Multi-domain]  Cd Length: 280  Bit Score: 62.46  E-value: 1.00e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFSLANELMAyWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15174   7 YWLIFLVgaVGNSLVVLIYTYYRRRKTMTDVYLLNLAIADLLfLCTL--PFWATAASSG-WVFGTFLCKVVNSMYKINFY 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPR--RVKATIVAVWLISAVISFPP-LVSLYRQPDGAA-----YPQCGLNDET 208
Cdd:cd15174  84 SCMLLLTCISVDRYIAIVQATKAHNSKNKRllYSKLVCFFVWLLSTILSLPEiLFSQSKEEESVTtctmvYPSNESNRFK 163
                       170       180
                ....*....|....*....|....*....
gi 178194   209 WYILS--SCIGsFFAPCLIMGLVYARIYR 235
Cdd:cd15174 164 VAVLAlkVTVG-FFLPFVVMVICYTLIIH 191
7tmA_motilin_R cd15132
motilin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
61-235 1.19e-10

motilin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Motilin receptor, also known as GPR38, is a G-protein coupled receptor that binds the endogenous ligand motilin. Motilin is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. Motilin is also called as the housekeeper of the gut because it is responsible for the proper filling and emptying of the gastrointestinal tract in response to food intake, and for stimulating the production of pepsin. Motilin receptor shares significant amino acid sequence identity with the growth hormone secretagogue receptor (GHSR) and neurotensin receptors (NTS-R1 and 2).


Pssm-ID: 320260 [Multi-domain]  Cd Length: 289  Bit Score: 62.12  E-value: 1.19e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLAnELMAY--WYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15132  10 LFVVGVTGNTMTVLIIRRYKDMRTTTNLYLSSMAVSDLLI-LLCLPFDLY-RLWKSrpWIFGEFLCRLYHYISEGCTYAT 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLIsAVISFPP---LVSLYRQPDGAAYPQCGLNDETWYILSS- 214
Cdd:cd15132  88 ILHITALSIERYLAICFPLRAKVLVTRRRVKCVIAALWAF-ALLSAGPflfLVGVEQDNNIHPDDFSRECKHTPYAVSSg 166
                       170       180
                ....*....|....*....|....*....
gi 178194   215 --------CIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15132 167 llgimiwvTTTYFFLPMLCLSFLYGFIGR 195
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
61-267 1.22e-10

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 62.12  E-value: 1.22e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVA------TLVMPFSLANELMAYWYFGQVWCGVylaLDVLF 134
Cdd:cd15103  10 LGIVSLLENILVILAIAKNKNLHSPMYFFICSLAVADMLVSvsnaleTIVIILLNNGYLVPRDSFEQHIDNV---IDSMI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   135 CTS---SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFppLVSLYrqpdgaaypqcglnDETWYI 211
Cdd:cd15103  87 CSSllaSICSLLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGI--LFIIY--------------SDSVPV 150
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   212 LSSCIGSFFAPCLIMGLVYARIYRVAKRRTrtlseKRAPVGPDGASPTTENGLGAA 267
Cdd:cd15103 151 IICLISMFFAMLVLMASLYVHMFLLARSHV-----KKIAALPGQRSTRQRANMKGA 201
7tmA_AT1R cd15192
type 1 angiotensin II receptor, member of the class A family of seven-transmembrane G ...
63-193 1.23e-10

type 1 angiotensin II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2R, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Moreover, AT1R promotes cell proliferation, whereas AT2R inhibits proliferation and stimulates cell differentiation. The AT2R is highly expressed during fetal development, however it is scarcely present in adult tissues and is induced in pathological conditions. Generally, the AT1R mediates many actions of Ang II, while the AT2R is involved in the regulation of blood pressure and renal function.


Pssm-ID: 320320 [Multi-domain]  Cd Length: 285  Bit Score: 62.06  E-value: 1.23e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15192  12 VVGIFGNSLVVIVIYCYMKLKTVANIFLLNLALAD-LCFLITLPLWAAYTAMEYhWPFGNFLCKIASALVSFNLYASVFL 90
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPplVSLYRQ 193
Cdd:cd15192  91 LTCLSIDRYLAIVHPMKSRLRRTLVVARVTCIVIWLLAGVASLP--AIIHRD 140
7tmA_NK1R cd16002
neurokinin 1 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
61-230 1.64e-10

neurokinin 1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neurokinin 1 receptor (NK1R), also known as tachykinin receptor 1 (TACR1) or substance P receptor (SPR), is a G-protein coupled receptor found in the mammalian central nervous and peripheral nervous systems. The tachykinins act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. SP is an extremely potent vasodilator through endothelium dependent mechanism and is released from the autonomic sensory nerves. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320668 [Multi-domain]  Cd Length: 284  Bit Score: 61.80  E-value: 1.64e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd16002  10 IVVVSVVGNIIVMWIILAHKRMRTVTNYFLVNLAFAEASMSAFNTVINFTYAIHNEWYYGLEYCKFHNFFPIAAVFASIY 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTprRVKATIVAVWLISAVISFPP--LVSLYRQPDG----AAYPQCGLND-ETWYILS 213
Cdd:cd16002  90 SMTAIALDRYMAIIHPLQPRLSAT--ATKVVICVIWVLAFLLAFPQgyYSDTEEMPGRvvcyVEWPEHEERKyETVYHVC 167
                       170
                ....*....|....*..
gi 178194   214 SCIGSFFAPCLIMGLVY 230
Cdd:cd16002 168 VTVLIYFLPLLVIGCAY 184
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
66-236 1.91e-10

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 61.25  E-value: 1.91e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILV-ATLVMPfslaNELMAY-----WYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd14995  15 IVGNIMVVLVVLRTRHMRTPTNCYLVSLAVADLMVlVAAGLP----NEIESLlgpdsWIYGYAGCLLITYLQYLGINASS 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP---DGAAYPQCGLNDETWYILSSCI 216
Cdd:cd14995  91 LSITAFTIERYIAICHPMKAQFICTVSRAKKIICFVWIFTSLYCSPWLFLLDLSIkhyGDDIVVRCGYKVSRHYYLPIYL 170
                       170       180
                ....*....|....*....|....
gi 178194   217 GSFF----APCLIMGLVYARIYRV 236
Cdd:cd14995 171 ADFVlfyvIPLLLAIVLYGLIGRI 194
7tmA_CCR5_CCR2 cd15184
CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G ...
61-249 2.30e-10

CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR2 and CCR5 share very high amino acid sequence identity. Both receptors play important roles in the trafficking of monocytes/macrophages and are implicated in the pathogenesis of immunologic diseases (rheumatoid arthritis, celiac disease, and transplant rejection) and cardiovascular diseases (atherosclerosis and autoimmune hepatitis). CCR2 is a receptor specific for members of the monocyte chemotactic protein family, including CCL2, CCL7, and CCL13. Conversely, CCR5 is a major co-receptor for HIV infection and binds many CC chemokine ligands, including CC chemokine ligands including CCL2, CCL3, CCL4, CCL5, CCL11, CCL13, CCL14, and CCL16. CCR2 is expressed primarily on blood monocytes and memory T cells, whereas CCR5 is expressed on antigen-presenting cells (macrophages and dendritic cells) and activated T effector cells. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341338 [Multi-domain]  Cd Length: 278  Bit Score: 61.31  E-value: 2.30e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPF---SLANElmayWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15184  10 VFIFGFVGNMLVVLILINCKKLKSMTDIYLLNLAISDLLF-LLTLPFwahYAANE----WVFGNAMCKLLTGLYHIGFFS 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAY-------PQCGLNDETWY 210
Cdd:cd15184  85 GIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVVTWVVAVFASLPGIIFTKSQKEGSHYtcsphfpPSQYQFWKNFQ 164
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15184 165 TLKMNILGLVLPLLVMIICYSGILKTLLRCRNEKKRHKA 203
7tmA_GnRHR_invertebrate cd15384
invertebrate gonadotropin-releasing hormone receptors, member of the class A family of ...
61-242 2.32e-10

invertebrate gonadotropin-releasing hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. GnRHR is expressed predominantly in the gonadotrope membrane of the anterior pituitary as well as found in numerous extrapituitary tissues including lymphocytes, breast, ovary, prostate, and cancer cell lines. There are at least two types of GnRH receptors, GnRHR1 and GnRHR2, which couple primarily to G proteins of the Gq/11 family. GnRHR is closely related to the adipokinetic hormone receptor (AKH), which binds to a lipid-mobilizing hormone that is involved in control of insect metabolism. They share a common ancestor and are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320506 [Multi-domain]  Cd Length: 293  Bit Score: 61.30  E-value: 2.32e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15384  10 MFVISFIGNLLTIIQIYRLRRSRRTIYSLLLHLAIADLLVTFFCIPSEAIWAYTVAWLAGNTMCKLVKYLQVFGLYLSTY 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWsvtqAVEYNLKR--TPRRVKATIVAVWLISAVISFPPLVSLY--RQPDGAAYPQC---GLNDETW---- 209
Cdd:cd15384  90 ITVLISLDRCV----AILYPMKRnqAPERVRRMVTVAWILSPIFSIPQAVIFHveRGPFVEDFHQCvtyGFYTAEWqeql 165
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   210 YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15384 166 YNMLSLVFMFPIPLVIMVTCYVLIFITLSKSSR 198
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
60-183 2.68e-10

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 60.96  E-value: 2.68e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVA------TLVMPFSLANELMAYWYFGQVWCGVylaLDVL 133
Cdd:cd15351   9 FLGLVSLVENILVVVAIAKNRNLHSPMYYFICCLAVSDMLVSvsnlieTLFMLLLEHGVLVCRAPMLQHMDNV---IDTM 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 178194   134 FCTS---SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVIS 183
Cdd:cd15351  86 ICSSvvsSLSFLGAIAVDRYITIFYALRYHSIMTLQRAVNAIAGIWLASTVSS 138
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
60-247 3.54e-10

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 60.51  E-value: 3.54e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFT--VVGNVLVVIAVLTSRALRA--PQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVylaLDVLFC 135
Cdd:cd15098   7 FGLIFClgVLGNSLVITVLARVKPGKRrsTTNVFILNLSIADLFFLLFCVPFQATIYSLPEWVFGAFMCKF---VHYFFT 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 TS---SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGAAYPQCGLN--DET 208
Cdd:cd15098  84 VSmlvSIFTLVAMSVDRYIAVVHSRTSSSLRTRRNALLGVLVIWVLSLAMASPVAVhqDLVHHWTASNQTFCWENwpEKQ 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 178194   209 W---YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEK 247
Cdd:cd15098 164 QkpvYVVCTFVFGYLLPLLLITFCYAKVLNHLHKKLKNMSKK 205
7tmA_BNGR-A34-like cd15000
putative neuropeptide receptor BNGR-A34 and similar proteins, member of the class A family of ...
61-192 5.31e-10

putative neuropeptide receptor BNGR-A34 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes putative neuropeptide receptor BNGR-A34 found in silkworm and its closely related proteins from invertebrates. They are members of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320131 [Multi-domain]  Cd Length: 285  Bit Score: 60.13  E-value: 5.31e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15000   9 VVLFGIFGNFVLLYILASNRSLRTPTNLLIGNMALADLLTLLVCPWMFLVHDFFQNYVLGSVGCKLEGFLEGSLLLASVL 88
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRtpRRVKATIVAVWLISAVISFPplVSLYR 192
Cdd:cd15000  89 ALCAVSYDRLTAIVLPSEARLTK--RGAKIVIVITWIVGLLLALP--LAIYR 136
7tmA_CXCR4 cd15179
CXC chemokine receptor type 4, member of the class A family of seven-transmembrane G ...
60-188 5.70e-10

CXC chemokine receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR4 is the only known G protein-coupled chemokine receptor for the key homeostatic ligand CXCL12, which is constitutively secreted by bone marrow stromal cells. Atypical chemokine receptor CXCR7 (ACKR3) also binds CXCL12, but activates signaling in a G protein-independent manner. CXCR4 is also a co-receptor for HIV infection and plays critical roles in the development of immune system during both lymphopoiesis and myelopoiesis. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341334 [Multi-domain]  Cd Length: 278  Bit Score: 60.17  E-value: 5.70e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFsLANELMAYWYFGQVWCgvyLALDVLFCT--- 136
Cdd:cd15179   9 IIFLLGIVGNGLVILVMGYQKKSRTMTDKYRLHLSVADLLF-VLTLPF-WAVDAAANWYFGNFLC---KAVHVIYTVnly 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15179  84 SSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWLPALLLTVPDLV 135
7tmA_NTSR cd15130
neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
61-203 6.10e-10

neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320258 [Multi-domain]  Cd Length: 281  Bit Score: 59.96  E-value: 6.10e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLF---LVSLASADILVATLVMPFSLANELMAY--WYFGQVWCGVYLALDVLFC 135
Cdd:cd15130  10 LFVVGTVGNSVTLFTLARKKSLQSLQSTVryhLGSLALSDLLILLLAMPVELYNFIWVHhpWAFGDAGCRGYYFLRDACT 89
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   136 TSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCG 203
Cdd:cd15130  90 YATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNESDDGTHPG 157
7tmA_SREB2_GPR85 cd15218
super conserved receptor expressed in brain 2 (or GPR85), member of the class A family of ...
60-190 8.01e-10

super conserved receptor expressed in brain 2 (or GPR85), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320346 [Multi-domain]  Cd Length: 330  Bit Score: 60.05  E-value: 8.01e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAN-ELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15218   9 FIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCCSDILRSAICFPFVFTSvKNGSTWTYGTLTCKVIAFLGVLSCFHT 88
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd15218  89 AFMLFCISVTRYLAIAHHRFYTKRLTFWTCLAVICMVWTLSVAMAFPPVLDV 140
7tmA_CCR1 cd15183
CC chemokine receptor type 1, member of the class A family of seven-transmembrane G ...
60-251 8.47e-10

CC chemokine receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR1 is widely expressed on both hematopoietic and non-hematopoietic cells and binds to the inflammatory CC chemokines CCL3, CCL5, CCL6, CCL9, CCL15, and CCL23. CCR1 activates the typical chemokine signaling pathway through the G(i/o) type of G proteins, causing inhibition of adenylate cyclase and stimulation of phospholipase C, PKC, calcium flux, and PLA2. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 320311 [Multi-domain]  Cd Length: 278  Bit Score: 59.50  E-value: 8.47e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15183   9 LVFIIGVVGNVLVVLVLIQHKRLRNMTSIYLFNLAISD-LVFLFTLPFWIDYKLKDDWIFGDAMCKFLSGFYYLGLYSEI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPD------GAAYPQCGLND-ETWYIL 212
Cdd:cd15183  88 FFIILLTIDRYLAIVHAVFALRARTVTFGIITSIITWALAILASMPCLYFFKSQWEfthhtcSAHFPRKSLIRwKRFQAL 167
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTrtlSEKRAPV 251
Cdd:cd15183 168 KLNLLGLILPLLVMIICYTGIINILLRRP---NEKKAKA 203
7tmA_CCR6 cd15172
CC chemokine receptor type 6, member of the class A family of seven-transmembrane G ...
60-233 9.96e-10

CC chemokine receptor type 6, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR6 is the only known receptor identified for the chemokine CCL20 (also known as macrophage inflammatory protein-3alpha, MIP-3alpha). CCR6 is expressed by all mature human B cells, effector memory T-cells, and dendritic cells found in the gut mucosal immune system. CCL20 contributes to recruitment of CCR6-expressing cells to Peyer's patches and isolated lymphoid follicles in the intestine, thereby promoting the assembly and maintenance of organized lymphoid structures. Also, CCL20 expression is highly inducible in response to inflammatory signals. Thus, CCL20 is involved in both inflammatory and homeostatic functions in the immune system. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. The CC chemokine receptors are all activating the G protein Gi.


Pssm-ID: 341330 [Multi-domain]  Cd Length: 281  Bit Score: 59.38  E-value: 9.96e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFSLANElMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15172   9 LICVVGLIGNSLVVITYAFYKRTKSMTDVYLLNMAIADILfVLTL--PFWAVYE-AHQWIFGNFSCKLLRGIYAINFYSG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVE-YNLK-RTPRRVKATIVAVWLISAVISFPPLV--SLY------RQPDGAAYPQcGLNDET 208
Cdd:cd15172  86 MLLLACISVDRYIAIVQATKsFRLRsRTLAYSKLICAAVWLLAILISLPTFIfsEVYdfgleeQYVCEPKYPK-NSTAIM 164
                       170       180
                ....*....|....*....|....*...
gi 178194   209 WYILSSCIG---SFFAPCLIMGLVYARI 233
Cdd:cd15172 165 WKLLVLSLQvslGFFIPLLVMIFCYSFI 192
7tmA_P2Y1-like cd15967
P2Y purinoceptor 1-like; P2Y1-like is an uncharacterized group that is phylogenetically ...
60-240 1.22e-09

P2Y purinoceptor 1-like; P2Y1-like is an uncharacterized group that is phylogenetically related to a family of purinergic G protein-coupled receptors. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320633 [Multi-domain]  Cd Length: 281  Bit Score: 58.93  E-value: 1.22e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFslaneLMAY------WYFGQVWCGVYLALD 131
Cdd:cd15967   7 YILVFVVglVGNVWGLKSLLANWKKLGNINVFVLNLGLADLLY-LLTLPF-----LVVYylkgrkWIFGQVFCKITRFCF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   132 VLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYI 211
Cdd:cd15967  81 NLNLYGSIGFLTCISVYRYLAIVHPMRVMGRITTTHSVVISALVWLLVVIQSLPDLFFSKTNSNGTKCFDTTFNDYLESY 160
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   212 LSSCIG----SFFAPCLIMGLVYARIYRVAKRR 240
Cdd:cd15967 161 LTYSLGwtvtGFVIPLLIILGCYGHVVVVLCRN 193
7tmA_PAR4 cd15372
protease-activated receptor 4, member of the class A family of seven-transmembrane G ...
76-193 1.29e-09

protease-activated receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; Protease-acted receptors (PARs) are seven-transmembrane proteins that belong to the class A G-protein coupled receptor (GPCR) family. Four different types of the protease-activated receptors have been identified: PAR1, PAR2, PAR3, and PAR4. PARs are predominantly expressed in platelets and are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320494 [Multi-domain]  Cd Length: 274  Bit Score: 58.99  E-value: 1.29e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    76 VLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVT 154
Cdd:cd15372  24 VLATQVKRLPSTIFLINLAVADLLLI-LVLPFKISYHFLGnNWPFGEGLCRVVTAFFYGNMYCSVLLLMCISLDRYLAVV 102
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 178194   155 QAVEYNLKRTPRRVKATIVAVWLISAVISFPplVSLYRQ 193
Cdd:cd15372 103 HPFFARTLRSRRFALCMCTAIWLIAAALTLP--LTLQRQ 139
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
61-185 1.47e-09

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 59.01  E-value: 1.47e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15212  10 IFLLSSLGNCAVIGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPFAFLTLFSRpGWLFGDRLCLANGFFNACFGIVST 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRtpRRVKATIVAVWLISAVISFP 185
Cdd:cd15212  90 LTMTLISFDRYYAIVRQPQGKIGR--RRALQLLAAAWLTALGFSLP 133
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
60-190 1.61e-09

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 58.80  E-value: 1.61e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRA--LRAPQNLFLVSLASADILVATLVMPFSLAnelmAY-----WYFGQVWCGVYLALDV 132
Cdd:cd14981   9 LMFVFGVLGNLLALIVLARSSKshKWSVFYRLVAGLAITDLLGILLTSPVVLA----VYasnfeWDGGQPLCDYFGFMMS 84
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd14981  85 FFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLPLLGL 142
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
60-183 2.33e-09

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 58.04  E-value: 2.33e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELM---AYWYFGqvwCGVYLALDVLF 134
Cdd:cd15232   7 FLFLYAAalTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTerkTISFGG---CMAQLYFFTWS 83
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   135 CTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVIS 183
Cdd:cd15232  84 LGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNS 132
7tmA_MC3R cd15352
melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G ...
61-253 2.59e-09

melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320474 [Multi-domain]  Cd Length: 272  Bit Score: 57.98  E-value: 2.59e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVA------TLVMPFSLANELMAYWYFGQVWCGVYLALDVLF 134
Cdd:cd15352  10 LGIVSLLENILVILAVVKNKNLHSPMYFFLCSLAVADMLVSvsnsleTIMIAVLNSGYLVISDQFIQHMDNVFDSMICIS 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   135 CTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVisfpplvslyrqpdgaaypqCGL----NDETWY 210
Cdd:cd15352  90 LVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALVLIAVIWVVCIV--------------------CGIvfivYSESKT 149
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 178194   211 ILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGP 253
Cdd:cd15352 150 VIVCLITMFFAMLVLMATLYVHMFLFARLHVKRIAALPPAVDG 192
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
60-248 4.69e-09

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 57.46  E-value: 4.69e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVV--GNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15162   7 YTLVFVVGlpANGMALWVLLFRTKKKAPAVIYMANLAIADLLLV-IWLPFKIAYHIHGnNWIFGEALCRLVTVAFYGNMY 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP--------PLVSLYRQPDGAAYPQCGL-NDE 207
Cdd:cd15162  86 CSILLLTCISIDRYLAIVHPMGHRRLRARRYALGTCLAIWLLALLVTLPlylvkqtiFLPALDITTCHDVLPEQLLvGDW 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 178194   208 TWYILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKR 248
Cdd:cd15162 166 FYYFLSLAIVGFLIPFILTASCYVATIRTLAALEDENSEKK 206
7tmA_C3aR cd15115
complement component 3a anaphylatoxin chemotactic receptors, member of the class A family of ...
66-249 5.08e-09

complement component 3a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320243 [Multi-domain]  Cd Length: 265  Bit Score: 57.09  E-value: 5.08e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVvIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELM-AYWYFGQVWCGVYLALDVLFCTSSIVHLCA 144
Cdd:cd15115  15 VPGNGLV-IWVAGLKMKRTVNTIWFLNLAVAD-LLCCLSLPFSIAHLLLnGHWPYGRFLCKLLPSIIVLNMFASVFTLTA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   145 ISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPplVSLYRQP-DGAAYPQCGLNDETWYILSSCIGSFFAPC 223
Cdd:cd15115  93 ISLDRFLLVIKPVWAQNHRSVLLACLLCGCIWILALLLCLP--VFIYRTTvTDGNHTRCGYDFLVAITITRAVFGFLLPL 170
                       170       180
                ....*....|....*....|....*.
gi 178194   224 LIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15115 171 LIIAACYSFIAFRMQRGRFAKSQSKT 196
7tmA_RNL3R2 cd15925
relaxin-3 receptor 2 (RNL3R2), member of the class A family of seven-transmembrane G ...
66-188 5.35e-09

relaxin-3 receptor 2 (RNL3R2), member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled receptor RNL3R2 is also known as GPR100, GPR142, and relaxin family peptide receptor 4 (RXFP4). Insulin-like peptide 5 (INSL5) is an endogenous ligand for RNL3R2 and plays a role in fat and glucose metabolism. INSL5 is highly expressed in human rectal and colon tissues. RNL3R2 signals through G(i) protein and inhibit adenylate cyclase, thereby inhibit cAMP accumulation.


Pssm-ID: 320591 [Multi-domain]  Cd Length: 283  Bit Score: 57.19  E-value: 5.35e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRA-PQNLFLVSLASADILVAtLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVHLC 143
Cdd:cd15925  15 LLGNLAVMYLLRNCARRAPpPIDVFVFNLALADFGFA-LTLPFWAVESALDFhWPFGGAMCKMVLTATVLNVYASVFLLT 93
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15925  94 AMSVTRYWVVASAAGPGTHLSTFWAKIITLALWAAALLATVPTAI 138
7tmA_CX3CR1 cd15186
CX3C chemokine receptor 1, member of the class A family of seven-transmembrane G ...
64-235 5.77e-09

CX3C chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; CX3CR1 is an inflammatory receptor specific for CX3CL1 (also known as fractalkine in human), which is involved in the adhesion and migration of leukocytes. The CX3C chemokine subfamily is only represented by CX3CL1, which exists in both soluble and membrane-anchored forms. Membrane-anchored form promotes strong adhesion of receptor-bearing leukocytes to CX3CL1-expressing endothelial cells. On the other hand, soluble CX3CL1, which is released by the proteolytic cleavage of membrane-anchored CX3CL1, is a potent chemoattractant for CX3CR1-expressing T cells and monocytes. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling.


Pssm-ID: 320314 [Multi-domain]  Cd Length: 273  Bit Score: 56.77  E-value: 5.77e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    64 FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFsLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15186  13 FGLVGNLLVVLALTNSGKSKSITDIYLLNLALSDLLfVATL--PF-WTHYLINEWGLHNAMCKLTTAFFFIGFFGGIFFI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDG--AAYPQcgLNDETWYILSSC---IG 217
Cdd:cd15186  90 TVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAVPQFMFTKMKENEclGDYPE--VLQEIWPVLRNVelnFL 167
                       170
                ....*....|....*...
gi 178194   218 SFFAPCLIMGLVYARIYR 235
Cdd:cd15186 168 GFLLPLLIMSYCYFRIIQ 185
7tmA_NPY6R cd15396
neuropeptide Y receptor type 6, member of the class A family of seven-transmembrane G ...
60-248 7.72e-09

neuropeptide Y receptor type 6, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety.


Pssm-ID: 320518 [Multi-domain]  Cd Length: 293  Bit Score: 56.76  E-value: 7.72e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVV------GNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVL 133
Cdd:cd15396   3 LIIAYSVVtivglfGNLCLITIIKKQKEEHNVTNILIANLSLSDVLVCVMCIPFTAVYTLMDHWIFGETMCKLTSFVQSV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   134 FCTSSIVHLCAISLDRywsvtqaveYNLKRTPRRVKAT-------IVAVWLISAVISFPPLVS--LYRQP------DGAA 198
Cdd:cd15396  83 SVSVSIFSLVLIAIER---------YQLIVNPRGWKPSashaywgIVLIWLFSLMISIPFLIFhqLTDEPfrnlssHSDF 153
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   199 YPQCGLNDETW------YILSSCIGSF--FAPCLIMGLVYARIYRVAKRRTRTLSEKR 248
Cdd:cd15396 154 YKDKVVCIEAWpseterLIFTTSLLVFqyFVPLGFIFICYLKIFVCLKKRNSKIDRMR 211
PHA02834 PHA02834
chemokine receptor-like protein; Provisional
60-210 8.08e-09

chemokine receptor-like protein; Provisional


Pssm-ID: 165177  Cd Length: 323  Bit Score: 56.84  E-value: 8.08e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     60 FLIVFTVVGNVLVvIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAyWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:PHA02834  37 LLFIFGLIGNVLV-IAVLIVKRFMFVVDVYLFNIAMSDLML-VFSFPFIIHNDLNE-WIFGEFMCKLVLGVYFVGFFSNM 113
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194    140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATiVAVWLISAVISFPPLVsLYRQPDGAAYPQCGLNDE----TWY 210
Cdd:PHA02834 114 FFVTLISIDRYILVVNATKIKNKSISLSVLLS-VAAWVCSVILSMPAMV-LYYVDNTDNLKQCIFNDYhenfSWS 186
7tmA_GPR19 cd15008
G protein-coupled receptor 19, member of the class A family of seven-transmembrane G ...
61-187 1.06e-08

G protein-coupled receptor 19, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 19 is an orphan receptor that is expressed predominantly in neuronal cells during mouse embryogenesis. Its mRNA is found frequently over-expressed in patients with small cell lung cancer. GPR19 shares a significant amino acid sequence identity with the D2 dopamine and neuropeptide Y families of receptors. Human GPR19 gene, intronless in the coding region, also has a distribution in brain overlapping that of the D2 dopamine receptor gene, and is located on chromosome 12. GPR19 is a member of the class A family of GPCRs, which represents a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320137 [Multi-domain]  Cd Length: 275  Bit Score: 56.00  E-value: 1.06e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15008   9 LWLVSVFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLLSVASAPFVLLQFTSGRWTLGSAMCKLVRYFQYLTPGVQIY 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRtpRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15008  89 VLLSICVDRFYTIVYPLSFKVSR--EKAKKMIAASWLFDAAFVSPAL 133
7tmA_FPR-like cd15117
N-formyl peptide receptors, member of the class A family of seven-transmembrane G ...
62-209 1.11e-08

N-formyl peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The formyl peptide receptors (FPRs) are chemoattractant GPCRs that involved in mediating immune responses to infection. They are expressed at elevated levels on polymorphonuclear and mononuclear phagocytes. FPRs bind N-formyl peptides, which are derived from the mitochondrial proteins of ruptured host cells or invading pathogens. Activation of FPRs by N-formyl peptides such as N-formyl-Met-Leu-Phe (FMLP) triggers a signaling cascade that stimulates neutrophil accumulation, phagocytosis and superoxide production. These responses are mediated through a pertussis toxin-sensitive G(i) protein that activates a PLC-IP3-calcium signaling pathway. While FPRs are involved in host defense responses to bacterial infection, they can also suppress the immune system under certain conditions. Yet, the physiological role of the FPR family is not fully understood.


Pssm-ID: 320245 [Multi-domain]  Cd Length: 288  Bit Score: 56.28  E-value: 1.11e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVvIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15117  11 FVLGTLGNGLV-IWVTGFRMTRTVTTVCFLNLAVAD-FAFCLFLPFSVVYTALGFhWPFGWFLCKLYSTLVVFNLFASVF 88
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL-YRQPDGAAYpqCGLNDETW 209
Cdd:cd15117  89 LLTLISLDRCVSVLWPVWARNHRTPARAALVAVGAWLLALALSGPHLVFRdTRKENGCTH--CYLNFDPW 156
7tmA_CMKLR1 cd15116
chemokine-like receptor 1, member of the class A family of seven-transmembrane G ...
63-188 1.20e-08

chemokine-like receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokine receptor-like 1 (also known as Chemerin receptor 23) is a GPCR for the chemoattractant adipokine chemerin, also known as retinoic acid receptor responder protein 2 (RARRES2), and for the omega-3 fatty acid derived molecule resolvin E1. Interaction with chemerin induces activation of the MAPK and PI3K signaling pathways leading to downstream functional effects, such as a decrease in immune responses, stimulation of adipogenesis, and angiogenesis. On the other hand, resolvin E1 negatively regulates the cytokine production in macrophages by reducing the activation of MAPK1/3 and NF-kB pathways. CMKLR1 is prominently expressed in dendritic cells and macrophages.


Pssm-ID: 320244 [Multi-domain]  Cd Length: 284  Bit Score: 55.92  E-value: 1.20e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVvIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15116  12 VLGVLGNGLV-IFITGFKMKKTVNTVWFLNLAVADFLF-TFFLPFSIAYTAMDFhWPFGRFMCKLNSFLLFLNMFTSVFL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15116  90 LTVISIDRCISVVFPVWSQNHRSVRLASLVSLAVWVVAFFLSSPSFI 136
7tmA_GPR176 cd15006
orphan G protein-coupled receptor 176, member of the rhodopsin-like class A GPCR family; ...
60-248 1.33e-08

orphan G protein-coupled receptor 176, member of the rhodopsin-like class A GPCR family; GPR176 is a putative G protein-coupled receptor that belongs to the class A GPCR superfamily; no endogenous ligand for GPR176 has yet been identified. The class A rhodopsin-like GPCRs represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320135 [Multi-domain]  Cd Length: 289  Bit Score: 56.03  E-value: 1.33e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSL---ANELMAYWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15006   8 VIFVGSLLGNFMVLWSTCRTSVFKSVTNRFIKNLACSGICASLVCVPFDIvlsASPHCCWWIYTLLFCKVIKFLHKVFCS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTprRVKATIVAVWlISAVISFPPLVSLYRQPDGAAYPQCglnDETW------- 209
Cdd:cd15006  88 VTVLSFAAIALDRYYSVLYPLERKISDA--KSRDLVIYIW-AHAVVASVPVFAVTNVTDIYAMSTC---TESWgyslghl 161
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 178194   210 -YILSSCIGSFFAPCLIMGLVYARIyrvakRRTRTLSEKR 248
Cdd:cd15006 162 vYVIIYNITTVILPVAVVFLFMILI-----RRALSASQKK 196
7tmA_ACKR2_D6 cd15188
atypical chemokine receptor 2, member of the class A family of seven-transmembrane G ...
61-249 1.42e-08

atypical chemokine receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; ACKR2 (also known as D6) binds non-selectively to all inflammatory CC-chemokines, but not to homeostatic CC-chemokines involved in controlling the migration of cells. Unlike the classical chemokine receptors that contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 320316 [Multi-domain]  Cd Length: 278  Bit Score: 55.95  E-value: 1.42e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLV-VIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFsLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15188  10 VFLLGLAGNLLLfVVLLLYVPKKKKMTEVYLLNLAVSDLLF-LVTLPF-WAMYVAWHWVFGSFLCKFVSTLYTINFYSGI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV--SLYRQPDGA--AYPQCGLNDETWYILSSC 215
Cdd:cd15188  88 FFVSCMSLDKYLEIVHAQSPHRLRTRRKSLLVLVAVWVLSIALSVPDMVfvQTHHTNNGVwvCHADYGGHHTIWKLVFQF 167
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   216 IGS---FFAPCLIMGLVYARIYRVAKrRTRTLSEKRA 249
Cdd:cd15188 168 QQNllgFLFPLLAMVFFYSRIACVLT-RLRPPGQGRA 203
7tmA_EBI2 cd15159
Epstein-Barr virus (EBV)-induced gene 2, member of the class A family of seven-transmembrane G ...
61-239 1.57e-08

Epstein-Barr virus (EBV)-induced gene 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Epstein-Barr virus-induced G-protein coupled receptor 2 (EBI2), also called GPR183, is activated by 7alpha, 25-dihydroxyxcholesterol (7alpha, 25-OHC), an oxysterol. EBI2 was originally identified as one of major genes induced in the Burkitt's lymphoma cell line BL41by EBV infection. EBI2 is involved in regulating B cell migration and responses, and is also implicated in human diseases such as type I diabetes, multiple sclerosis, and cancers.


Pssm-ID: 320287 [Multi-domain]  Cd Length: 286  Bit Score: 55.82  E-value: 1.57e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15159  10 ILVFGLLGNTLALHVICQKRKKINSTTLYLINLAVSDILF-TLALPGRIAYYALGFdWPFGDWLCRLTALLFYINTYAGV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV-SLYRQPDGAA----YPQC-GLNDETWYILS 213
Cdd:cd15159  89 NFMTCLSVDRYIAVVHPLRRHRLRKVKVVRYICVFVWVLVFLQTLPLLFmPMTKEMGGRItcmeYPNFeKIKRLPLILLG 168
                       170       180       190
                ....*....|....*....|....*....|
gi 178194   214 SCIGSFFAPCLIMGLVYARI----YRVAKR 239
Cdd:cd15159 169 ACVIGFGVPVGIILFCYSQItlklCRTAKE 198
7tmA_GPR182 cd14988
G protein-coupled receptor 182, member of the class A family of seven-transmembrane G ...
60-188 1.61e-08

G protein-coupled receptor 182, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR182 is an orphan G-protein coupled receptor that belongs to the class A of seven-transmembrane GPCR superfamily. When GPR182 gene was first cloned, it was proposed to encode an adrenomedullin receptor. However when the corresponding protein was expressed, it was found not to respond to adrenomedullin (ADM). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320119 [Multi-domain]  Cd Length: 278  Bit Score: 55.55  E-value: 1.61e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCT 136
Cdd:cd14988   7 YLVIFVVglVENVLVIWVNWHRWGSKNLVNLYILNMAIADLGV-VLTLPVWMLEVMLDYtWLWGSFLCKFTHYFYFANMY 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd14988  86 SSIFFLTCLSVDRYLTLTSSSPFWQQHQHRIRRALCAGIWVLSAIIPLPEVV 137
7tmA_RNL3R1 cd15926
relaxin 3 receptor 1 (RNL3R1), member of the class A family of seven-transmembrane G ...
66-248 1.80e-08

relaxin 3 receptor 1 (RNL3R1), member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled receptor RNL3R1 is also known as GPCR135, relaxin family peptide receptor 3 (RXFP3), and somatostatin- and angiotensin-like peptide receptor (SALPR). RNL3/relaxin-3, a member of the insulin superfamily, is an endogenous neuropeptide ligand for RNL3R1. RNL3R1 is predominantly expressed in brain regions and implicated in stress, anxiety, and feeding, and metabolism. RNL3R1 signals through G(i) protein and inhibit adenylate cyclase, thereby inhibit cAMP accumulation, and also activates Erk1/2 signaling pathway.


Pssm-ID: 320592 [Multi-domain]  Cd Length: 288  Bit Score: 55.67  E-value: 1.80e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQ-NLFLVSLASADiLVATLVMPF-SLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLC 143
Cdd:cd15926  15 LVGNLLVLYLMKSKQGWKKSSiNLFVTSLAVTD-FQFVLTLPFwAVENALDFTWLFGKAMCKIVSYVTAMNMYASVFFLT 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV------------SLYRQPDGAAYPQCGLNdetWYI 211
Cdd:cd15926  94 AMSVARYHSVASALKSKRRRGCCSAKWLCVLIWVLAILASLPNAIfsttatvsneelCLVKFPDNRGNAQFWLG---LYH 170
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   212 LSSCIGSFFAPCLIMGLVYARIYR-VAKRRTRTLSEKR 248
Cdd:cd15926 171 AQKVLLGFLIPLGIISLCYLLLVRfITDKNITGSSTKR 208
7tmA_NPY1R cd15395
neuropeptide Y receptor type 1, member of the class A family of seven-transmembrane G ...
61-188 2.01e-08

neuropeptide Y receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. When NPY signals through NPY2R in concert with NPY5R, it induces angiogenesis and consequently plays an important role in revascularization and wound healing. On the other hand, when NPY acts through NPY1R and NPYR5, it acts as a vascular mitogen, leading to restenosis and atherosclerosis.


Pssm-ID: 320517 [Multi-domain]  Cd Length: 293  Bit Score: 55.59  E-value: 2.01e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15395  10 VIILGVSGNLALIIIILKQKEMHNVTNILIVNLSFSDLLMTIMCLPFTFVYTLMDHWVFGEAMCKLNSMVQCISITVSIF 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   141 HLCAISLDRYWSVTQAVEYnlKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15395  90 SLVLIAIERHQLIINPRGW--RPNNRHAYVGIAVIWVLAVLTSLPFLI 135
7tmA_GPR3_GPR6_GPR12-like cd15100
G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of ...
69-259 2.55e-08

G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3. Also included in this subfamily is GPRx, also known as GPR185, which involved in the maintenance of meiotic arrest in frog oocytes.


Pssm-ID: 320228 [Multi-domain]  Cd Length: 268  Bit Score: 54.79  E-value: 2.55e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAT-LVMPFslaneLMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15100  18 NAIVVAIIFSTPSLRAPMFLLIGSLALADLLAGLgLILHF-----VFRYCVYSEALSLVSVGLLVAAFSASVCSLLAITV 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAypqCG-LNDETWYILSSCIGSFFAPCLIM 226
Cdd:cd15100  93 DRYLSLYNALTYYSERTLTFTYVMLALLWTLALGLGLLPVLGWNCLREGSS---CSvVRPLTKNHLAVLAVAFLLVFALM 169
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   227 GLVYARIYRVAKRRTRTLSEKRAPVGPDGASPT 259
Cdd:cd15100 170 LQLYAQICRIVLRHAHQIALQRHFLAPSHYVAT 202
7tmA_Proton-sensing_R cd15160
proton-sensing G protein-coupled receptors, member of the class A family of ...
60-251 3.58e-08

proton-sensing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Proton/pH-sensing G-protein coupled receptors sense pH of 7.6 to 6.0. They mediate a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. The proton/pH-sensing receptor family includes the G2 accumulation receptor (G2A, also known as GPR132), the T cell death associated gene-8 (TDAG8, GPR65) receptor, ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4).


Pssm-ID: 320288 [Multi-domain]  Cd Length: 280  Bit Score: 54.70  E-value: 3.58e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15160   9 FVFVVGLPANCLALWVLYLQIKKENVLGVYLLNLSLSD-LLYILTLPLWIDYTANHHnWTFGPLSCKVVGFFFYTNIYAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC--GLNDETWYI---LS 213
Cdd:cd15160  88 IGFLCCIAVDRYLAVVHPLRFRGLRTRRFALKVSASIWVLELGTHSVFLGHDELFRDEPNHTLCyeKYPMEGWQAsynYA 167
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   214 SCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPV 251
Cdd:cd15160 168 RFLVGFLIPLSLILFFYRRVLRAVRQSPSLEREEKRKI 205
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
63-194 3.96e-08

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 54.22  E-value: 3.96e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANelmaYWY----------FGQVWCgvylaLDV 132
Cdd:cd15221  12 IVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAI----FWFgageisfdgcLTQMFF-----VHF 82
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 178194   133 LFCTSSIVhLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP 194
Cdd:cd15221  83 VFVTESAI-LLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLP 143
7tmA_NTSR2 cd15356
neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G ...
60-185 4.44e-08

neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320478 [Multi-domain]  Cd Length: 285  Bit Score: 54.49  E-value: 4.44e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVV------GNVLVVIAVLTSRALRAPQNLF---LVSLASADILVATLVMPFSLANELMAY--WYFGQVWCGVYL 128
Cdd:cd15356   3 FTAVYALIwalgaaGNALTIHLVLKKRSLRGLQGTVhyhLVSLALSDLLILLISVPIELYNFVWFHypWVFGDLVCRGYY 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   129 ALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15356  83 FVRDICSYATVLNIASLSAERYLAICQPLRAKRLLSKRRTKWLLALIWASSLGFALP 139
7tmA_Parapinopsin cd15075
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled ...
63-187 4.56e-08

non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.


Pssm-ID: 320203 [Multi-domain]  Cd Length: 279  Bit Score: 54.40  E-value: 4.56e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCgVYLALDVLFCtsSIVHL 142
Cdd:cd15075  12 IASVVLNATVIIVTLRHKQLRQPLNYALVNLAVADLGTTVFGGLLSVVTNAVGYFNLGRVGC-VLEGFAVAFF--GIAAL 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   143 CA---ISLDRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15075  89 CTvavIAVDRLFVVCKPLG-TLTFQTRHALAGIASSWLWSLIWNTPPL 135
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
61-245 4.66e-08

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 54.17  E-value: 4.66e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVA------TLVMPFSLANELMAYWYFGQVWCGVYlalDVLF 134
Cdd:cd15354  10 LGIISLLENILVILAIVKNKNLHSPMYFFVCSLAVADMLVSvsnaweTITIYLLNNRHLVIEDAFVRHIDNVF---DSLI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   135 CTSSIVHLC---AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAvisfpplvslyrqpdgaaypQCG----LNDE 207
Cdd:cd15354  87 CISVVASMCsllAIAVDRYVTIFYALRYHNIMTVRRAGIIIACIWTFCT--------------------GCGiifiLYSE 146
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 178194   208 TWYILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLS 245
Cdd:cd15354 147 STYVIICLITMFFAMLFLMVSLYIHMFLLARTHVKRIA 184
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
60-242 4.84e-08

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 54.25  E-value: 4.84e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELM-AYWYFGQVWCGV--YLALDVLF 134
Cdd:cd15168   7 YGVVFLVglLLNSVVLYRFIFHLKPWNSSAIYMFNLAVSDLLYL-LSLPFLIYYYANgDHWIFGDFMCKLvrFLFYFNLY 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   135 CtsSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP--PLVSLYRQPDGAAypqC-------GLN 205
Cdd:cd15168  86 G--SILFLTCISVHRYLGICHPLRSLGKLKKRHAVAISVAVWILVLLQLLPilFFATTGRKNNRTT---CydttspeELN 160
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 178194   206 DETWYILSSCIGSFFAPCLIMGLVYARIYRVAKRRTR 242
Cdd:cd15168 161 DYVIYSMVLTGLGFLLPLLIILACYGLIVRALIRKLG 197
7tmA_GRPR cd15124
gastrin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
61-188 5.84e-08

gastrin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The gastrin-releasing peptide receptor (GRPR) is a G-protein coupled receptor whose endogenous ligand is gastrin releasing peptide. GRP shares high sequence homology with the neuropeptide neuromedin B in the C-terminal region. This receptor is high glycosylated and couples to a pertussis-toxin-insensitive G protein of the family of Gq/11, which leads to the activation of phospholipase C. Gastrin-releasing peptide (GRP) is a potent mitogen for neoplastic tissues and involved in regulating multiple functions of the gastrointestinal and central nervous systems. These include the release of gastrointestinal hormones, the contraction of smooth muscle cells, and the proliferation of epithelial cells. GRPR belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include neuromedin B receptor (NMBR) and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin.


Pssm-ID: 320252 [Multi-domain]  Cd Length: 293  Bit Score: 54.14  E-value: 5.84e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15124  10 IILIGLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLVTCAPVDASRYLADEWLFGRVGCKLIPFIQLTSVGVSVF 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15124  90 TLTALSADRYKAIVRPMDIQASNALMKICLKAALIWILSMLLAIPEAV 137
7tmA_ET-AR cd15975
endothelin A (or endothelin-1) receptor, member of the class A family of seven-transmembrane G ...
62-212 5.93e-08

endothelin A (or endothelin-1) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelins are able to activate a number of signal transduction processes including phospholipase A2, phospholipase C, and phospholipase D, as well as cytosolic protein kinase activation. They play an important role in the regulation of the cardiovascular system and are the most potent vasoconstrictors identified, stimulating cardiac contraction, regulating the release of vasoactive substances, and stimulating mitogenesis in blood vessels. Two endothelin receptor subtypes have been isolated and identified in vertebrates, endothelin A receptor (ET-A) and endothelin B receptor (ET-B), and are members of the seven transmembrane class A G-protein coupled receptor family which activate multiple effectors via different types of G protein. Some vertebrates contain a third subtype, endothelin A receptor (ET-C). ET-A receptors are mainly located on vascular smooth muscle cells, whereas ET-B receptors are present on endothelial cells lining the vessel wall. Endothelin receptors have also been found in the brain.


Pssm-ID: 320641 [Multi-domain]  Cd Length: 300  Bit Score: 54.10  E-value: 5.93e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSS- 138
Cdd:cd15975   9 IIFIVgmVGNATLLRIIYQNKCMRNGPNALIASLALGDLIYIVIDIPINVYKLLAQKWPFDDSSFGVFLCKLVPFLQKAs 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 ----IVHLCAISLDRY-----WSVTQAVEynlkrTPRRVKATIVAVWLISAVISFPPLVSLYRQP---DGAAYPQCGLND 206
Cdd:cd15975  89 vgitVLNLCALSVDRYravasWSRVQGIG-----IPLITAIEIFSIWVLSFILAIPEAIGFVMVPfeyNGEQYRTCMLNA 163

                ....*.
gi 178194   207 ETWYIL 212
Cdd:cd15975 164 TTKFMN 169
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
65-194 6.10e-08

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 53.78  E-value: 6.10e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    65 TVVGNVLVVIAVLTSRALRAPQNLFLVS-LASADILVATLVMPFSLANELMAYWY--FGQVW-----CGVYLALDVLFCT 136
Cdd:cd14980  14 ALIGNILVIIWHISSKKKKKKVPKLLIInLAIADFLMGIYLLIIAIADQYYRGRYaqYSEEWlrsppCLLACFLVSLSSL 93
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNlKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP 194
Cdd:cd14980  94 MSVLMMLLITLDRYICIVYPFSNK-RLSYKSAKIILILGWLFSIIFAAIPILYSINQP 150
7tmA_GPR31 cd15199
G protein-coupled receptor 31, member of the class A family of seven-transmembrane G ...
85-247 6.51e-08

G protein-coupled receptor 31, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR31, also known as 12-(S)-HETE receptor, is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid. Phylogenetic analysis showed that GPR31 and oxoeicosanoid receptor 1 (OXER1, GPR170) are the most closely related receptors to the hydroxycarboxylic acid receptor family (HCARs). GPR31, like OXER1, activates the ERK1/2 (MAPK3/MAPK1) pathway of intracellular signaling, but unlike the OXER1, does not cause increase in the cytosolic calcium level. GPR31 is also shown to activate NFkB. 12-(S)-HETE is a 12-lipoxygenase metabolite of arachidonic acid produced by mammalian platelets and tumor cells. It promotes tumor cells adhesion to endothelial cells and sub-endothelial matrix, which is a critical step for metastasis.


Pssm-ID: 320327 [Multi-domain]  Cd Length: 278  Bit Score: 53.64  E-value: 6.51e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    85 PQNLFLVSLASADILVAtLVMPFSLANELM-AYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVtqaVEYNLKR 163
Cdd:cd15199  34 PYAVYLLNLVLADVLLL-ICLPFKAYFYLNgNRWSLGGGTCKALLFMLSLSRGVSIAFLTAVALDRYFRV---VHPRGKK 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   164 ---TPRRVKATIVAVWLISAVISFPPLV-----------SLYRQPDGAAYpqcglndETWYILSSCIgSFFAPCLIMGLV 229
Cdd:cd15199 110 nslSLQAAPYISFLVWLLLVGLTIPTLLasqpknftecnSFSPKDDEDFS-------DTWQEAVFFL-QFLLPFGLIVFC 181
                       170
                ....*....|....*...
gi 178194   230 YARIYRVAKRRTRTLSEK 247
Cdd:cd15199 182 TVRIIRRLKKRLRDVGKQ 199
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
61-181 8.09e-08

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 53.37  E-value: 8.09e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVA------TLVMPFSLANELMAywyfGQVWCGVYLALDVLF 134
Cdd:cd15353  10 LGIVSLLENILVIAAIAKNKNLHSPMYFFICSLAVADMLVSvsngseTVVITLLNGNDTDA----QSFTVNIDNVIDSVI 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 178194   135 CTS---SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAV 181
Cdd:cd15353  86 CSSllaSICSLLSIAVDRYFTIFYALQYHNIMTVRRAGVIITCIWTACTV 135
7tmA_NTSR1 cd15355
neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G ...
60-190 1.56e-07

neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320477 [Multi-domain]  Cd Length: 310  Bit Score: 52.93  E-value: 1.56e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQ---NLFLVSLASADILVATLVMPFSLANELMAY--WYFGQVWC-GVYLALDVl 133
Cdd:cd15355   9 ALFVVGTVGNSITLYTLARKKSLQHLQstvHYHLASLALSDLLILLLAMPVELYNFIWVHhpWAFGDAACrGYYFLRDA- 87
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   134 fCT-SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd15355  88 -CTyATALNVASLSVERYLAICHPFKAKSLMSRSRTKKFISAIWLASALLAIPMLFTM 144
7tmA_GPR12 cd15961
G protein-coupled receptor 12, member of the class A family of seven-transmembrane G ...
69-188 1.84e-07

G protein-coupled receptor 12, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320627 [Multi-domain]  Cd Length: 268  Bit Score: 52.34  E-value: 1.84e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAT-LVMPFslaneLMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15961  18 NAIVVLIIFQNPSLRAPMFLLIGSLALADLLAGIgLILNF-----IFAYLLQSEAAKLVTVGLIVASFSASVCSLLAITV 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15961  93 DRYLSLYYALTYNSERTVTFTYVMLVLLWGASICLGLLPVM 133
7tmA_GPR17 cd15161
G protein-coupled receptor 17, member of the class A family of seven-transmembrane G ...
60-189 1.85e-07

G protein-coupled receptor 17, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR17 is a Forkhead box protein O1 (FOXO1) target and abundantly expressed in agouti-related peptide (AGRP) neurons. FOXO1 is a transcription factor that plays key roles in regulation of gluconeogenesis and glycogenolysis by insulin signaling. For instance, food intake and body weight increase when hypothalamic FOXO1 is activated, whereas they both decrease when FOXO1 is inhibited. However, a recent study has been reported that GPR17 deficiency in mice did not affect food intake or glucose homeostasis. Thus, GPR17 may not play a role in the control of food intake, body weight, or glycemic control. GPR17 is phylogenetically closely related to purinergic P2Y and cysteinyl-leukotriene receptors.


Pssm-ID: 320289 [Multi-domain]  Cd Length: 277  Bit Score: 52.40  E-value: 1.85e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15161   7 YILVFilAFPGNTLALWLFIHDRKSGTPSNVFLMHLAVAD-LSYVLILPMRLVYHLSGnHWPFGEVPCRLAGFLFYLNMY 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS 189
Cdd:cd15161  86 ASLYFLACISVDRFLAIVHPVKSMKIRKPLYAHVVCGFLWVIVTVAMAPLLVS 138
7tmA_BRS-3 cd15123
bombesin receptor subtype 3, member of the class A family of seven-transmembrane G ...
61-188 2.11e-07

bombesin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; BRS-3 is classified as an orphan receptor and belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include neuromedin B receptor (NMBR) and gastrin-releasing peptide receptor (GRPR). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple primarily to the G proteins of G(q/11) family. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. BRS-3 is suggested to play a role in sperm cell division and maturation.


Pssm-ID: 320251 [Multi-domain]  Cd Length: 294  Bit Score: 52.23  E-value: 2.11e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15123  10 IISVGILGNAILIKVFFKIKSMQTVPNIFITSLAFGDLLLLLTCVPVDATRYIADTWLFGRIGCKLLSFIQLTSVGVSVF 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15123  90 TLTVLSADRYRAIVKPLELQTSDAVLKTCCKAGCVWIVSMLFAIPEAV 137
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
63-235 2.22e-07

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 52.16  E-value: 2.22e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCgVYLALDVLFctSSIVHL 142
Cdd:cd15085  12 TFSIFNNVLVIAVTLKNPQLRNPINIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFC-IFQGFAVNY--FGIVSL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   143 CAISL---DRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC--GLNDETW----YILS 213
Cdd:cd15085  89 WSLTLlayERYNVVCKPMG-GLKLSTKRGYQGLLFIWLFCLFWAVAPLFGWSSYGPEGVQTSCsiGWEERSWsnysYLIL 167
                       170       180
                ....*....|....*....|..
gi 178194   214 SCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15085 168 YFLMCFVIPVAIIGFSYGNVLR 189
7tmA_AT2R cd15191
type 2 angiotensin II receptor, member of the class A family of seven-transmembrane G ...
63-235 2.23e-07

type 2 angiotensin II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2R, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Moreover, AT1R promotes cell proliferation, whereas AT2R inhibits proliferation and stimulates cell differentiation. The AT2R is highly expressed during fetal development, however it is scarcely present in adult tissues and is induced in pathological conditions. Generally, the AT1R mediates many actions of Ang II, while the AT2R is involved in the regulation of blood pressure and renal function.


Pssm-ID: 341341 [Multi-domain]  Cd Length: 285  Bit Score: 52.06  E-value: 2.23e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATlVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15191  12 ILGFLGNSLVVCVFCHQSGPKTVASIYIFNLAVADLLFLA-TLPLWATYYSYGYnWLFGSVMCKICGSLLTLNLFASIFF 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   142 LCAISLDRYwsvtQAVEYNLK---RTPRRVKATIVAVWLISAVISFP--------PLVSLYRQPDGAAYPqcglNDE--T 208
Cdd:cd15191  91 ITCMSVDRY----LAVVYPLRsqrRRSWQARLVCLLVWVLACLSSLPtfyfrdtyYIEELGVNACIMAFP----NEKyaQ 162
                       170       180       190
                ....*....|....*....|....*....|
gi 178194   209 WYI---LSSCIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15191 163 WSAglaLMKNTLGFLIPLIVIATCYFGIGR 192
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
60-184 2.39e-07

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 52.22  E-value: 2.39e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15235   8 FLAMYllTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNT 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15235  88 DSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSL 134
7tmA_LTB4R1 cd15121
leukotriene B4 receptor subtype 1 (LTB4R1 or BLT1), member of the class A family of ...
68-192 2.44e-07

leukotriene B4 receptor subtype 1 (LTB4R1 or BLT1), member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the Gq-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320249 [Multi-domain]  Cd Length: 278  Bit Score: 52.13  E-value: 2.44e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15121  17 GNLFVVWSVLCRMKKRSVTCILVLNLALADAAV-LLTAPFFLHFLSGGGWEFGSVVCKLCHYVCGVSMYASIFLITLMSM 95
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPplVSLYR 192
Cdd:cd15121  96 DRCLAVAKPFLSQKMRTKRSVRALLLAIWIVAFLLSLP--MPFYR 138
7tmA_Apelin_R cd15190
apelin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
60-247 2.77e-07

apelin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Apelin (APJ) receptor is a G protein-coupled receptor that binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake.


Pssm-ID: 341340 [Multi-domain]  Cd Length: 304  Bit Score: 52.07  E-value: 2.77e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRA-PQNLFLVSLASADI-LVATLvmPFSLANELMAY-WYFGQVWCGVYLALDVLF 134
Cdd:cd15190  17 YMLVFVLglSGNGLVLWTVFRSKRKRRrSADTFIANLALADLtFVVTL--PLWAVYTALGYhWPFGSFLCKLSSYLVFVN 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   135 CTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQP---DGAAYPQC-------GL 204
Cdd:cd15190  95 MYASVFCLTGLSFDRYLAIVRSLASAKLRSRTSGIVALGVIWLLAALLALPALI--LRTTsdlEGTNKVICdmdysgvVS 172
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 178194   205 NDETWYI-----LSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEK 247
Cdd:cd15190 173 NESEWAWiaglgLSSTVLGFLLPFLIMLTCYFFIGRTVARHFSKLRRK 220
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
64-188 2.97e-07

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 51.76  E-value: 2.97e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    64 FTVVGNVLVVIAVLTSRALRA-PQNLFLVSLASADILVATlvmpFSLANELMAYWYFGQVWCGVYL----ALDVLFcTSS 138
Cdd:cd15099  13 VTFLENILVLLTILSSTALRRrPSYLFIGSLALADMLASV----IFTISFLDFHVFHQRDSRNLFLfklgGVTMAF-TAS 87
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15099  88 VGSLLLTALDRYLCIYQPSNYKLLVTRTRAKVAILLMWCVTIIISFLPLM 137
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
61-256 2.98e-07

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 52.11  E-value: 2.98e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATL-VMPfSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15386  10 ILVVATAGNLAVLLAMYRMRRKMSRMHLFVLHLALTDLVVALFqVLP-QLIWEITYRFQGPDLLCRAVKYLQVLSMFAST 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPPL--VSLYRQPDGAAYPQCGLN-DETW----YIL 212
Cdd:cd15386  89 YMLIMMTVDRYIAVCHPLR-TLQQPSRQAYLMIGATWLLSCILSLPQVfiFSLREVDQGSGVLDCWADfGFPWgakaYIT 167
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 178194   213 SSCIGSFFAPCLIMGLVYA----RIYRVAKRRTRTLSEKRAPVGPDGA 256
Cdd:cd15386 168 WTTLSIFVLPVAILIVCYSlicyEICKNLKGKTQTSRSEGGGWRTQGM 215
7tmA_ACKR3_CXCR7 cd14987
CXC chemokine receptor 7, member of the class A family of seven-transmembrane G ...
60-185 3.45e-07

CXC chemokine receptor 7, member of the class A family of seven-transmembrane G protein-coupled receptors; ACKR3, also known as CXCR7, is an atypical chemokine receptor for CXCL12 and CXCR11. Unlike the classical chemokine receptors, ACKR3 contains a DRYLSIT-sequence instead of the conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. Thus, ACKR3 does not activate classical GPCR signaling, instead induces beta-arrestin recruitment which is leading to ligand internalization and MAP-kinase activation. It is acting as a scavenger for CXCL12 and, to a lesser degree, for CXCL11. ACKR3 is highly expressed by blood vascular endothelial cells in brain, in numerous embryonic and neonatal tissues, in inflamed tissues and in a variety of cancers such as lymphomas, sarcomas, prostate and breast cancers, and gliomas. Five receptors have been identified for the ACKR family, including CC-Chemokine Receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, DARC, and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 320118 [Multi-domain]  Cd Length: 282  Bit Score: 51.68  E-value: 3.45e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANEL-MAYWYFGQVWCGV-YLALDV-LFct 136
Cdd:cd14987   9 FIFVIGLLANSVVVWVNLQAKRTGYETHLYILNLAIADLCV-VATLPVWVVSLVqHNQWPMGEFTCKItHLIFSInLF-- 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd14987  86 GSIFFLTCMSVDRYLSVTLFGNTSSRRKKIVRRIICVLVWLLAFVASLP 134
7tmA_GPER1 cd14989
G protein-coupled estrogen receptor 1, member of the class A family of seven-transmembrane G ...
60-248 3.50e-07

G protein-coupled estrogen receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled estrogen receptor 1 (GPER1), also known as the G-protein coupled receptor 30 (GPR30), is a high affinity receptor for estrogen. This receptor is a member of the class A of seven-transmembrane GPCRs. Estrogen binding results in intracellular calcium mobilization and synthesis of phosphatidylinositol (3,4,5)-trisphosphate in the nucleus. GPR30 plays an important role in development of tamoxifen resistance in breast cancer cells. The distribution of GPR30 is well established in the rodent, with high expression observed in the hypothalamus, pituitary gland, adrenal medulla, kidney medulla and developing follicles of the ovary. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320120 [Multi-domain]  Cd Length: 276  Bit Score: 51.36  E-value: 3.50e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASAD-ILVA-TLVMPFSLANElmayWYFGQVWC---GVYLALDVLf 134
Cdd:cd14989   9 FLFPIGFIGNILILVVNLSFREKMTIPDLYFVNLAVADlILVAdSLIEVFNLNEK----YYDIAVLCtfmSLFLQINMY- 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   135 ctSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAyPQCGLNDETWYILSS 214
Cdd:cd14989  84 --SSIFFLTWMSFDRYIALAKVMKSSPLRTMQHARLSCGLIWMASISATLLPFTAVQAQHTGEV-HFCFADVREIQWLEV 160
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   215 CIGsFFAPCLIMGLVYARIYRVAKR--RTRTLSEKR 248
Cdd:cd14989 161 TLG-FIIPFSIIGLCYSLIVRVLVRaqKHRRLRPRR 195
7tmA_GPR150 cd15198
G protein-coupled receptor 150, member of the class A family of seven-transmembrane G ...
61-279 5.48e-07

G protein-coupled receptor 150, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors. Its endogenous ligand is not known. These receptors share a significant amino acid sequence similarity, suggesting that they have a common evolutionary origin.


Pssm-ID: 320326 [Multi-domain]  Cd Length: 299  Bit Score: 50.96  E-value: 5.48e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15198  10 ILVAGVAGNTTVLCWLCGGRRRKSRMNFLLLQLALADLLVIGGTALSQIIWELLGdRWMAGDVACRLLKLLQASARGASA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYwsvtQAVEYNLKRtPRRVKATIVAVWLISAVISFPPL-VSLYRQPDGAAYPQCGL--------NDETW- 209
Cdd:cd15198  90 NLVVLLALDRH----QAIRAPLGQ-PLRAWKLAALGWLLALLLALPQAyVFRVDFPDDPASAWPGHtlcrgifaPLPRWh 164
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   210 ---YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGPDGASPTTenglgaaageARTGTARPR 279
Cdd:cd15198 165 lqvYATYEAVVGFVAPVVILGVCYGRLLLKWWERANQAPGAKKPWKKPSKSHLR----------ATAPSALPR 227
7tmA_ET-BR cd15976
endothelin B receptor, member of the class A family of seven-transmembrane G protein-coupled ...
60-185 5.71e-07

endothelin B receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelins are able to activate a number of signal transduction processes including phospholipase A2, phospholipase C, and phospholipase D, as well as cytosolic protein kinase activation. They play an important role in the regulation of the cardiovascular system and are the most potent vasoconstrictors identified, stimulating cardiac contraction, regulating the release of vasoactive substances, and stimulating mitogenesis in blood vessels. Two endothelin receptor subtypes have been isolated and identified in vertebrates, endothelin A receptor (ET-A) and endothelin B receptor (ET-B), and are members of the seven transmembrane class A G-protein coupled receptor family which activate multiple effectors via different types of G protein. Some vertebrates contain a third subtype, endothelin A receptor (ET-C). ET-A receptors are mainly located on vascular smooth muscle cells, whereas ET-B receptors are present on endothelial cells lining the vessel wall. Endothelin receptors have also been found in the brain.


Pssm-ID: 320642 [Multi-domain]  Cd Length: 296  Bit Score: 51.01  E-value: 5.71e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15976   9 LVFVLGIIGNSTLLRIIYKNKCMRNGPNILIASLALGDLLHIIIDIPINVYKLLAEDWPFGVEMCKLVPFIQKASVGITV 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15976  89 LSLCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSIILAVP 134
7tmA_NPY5R cd15398
neuropeptide Y receptor type 5, member of the class A family of seven-transmembrane G ...
60-185 6.15e-07

neuropeptide Y receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. When NPY signals through NPY2R in concert with NPY5R, it induces angiogenesis and consequently plays an important role in revascularization and wound healing. On the other hand, when NPY acts through NPY1R and NPYR5, it acts as a vascular mitogen, leading to restenosis and atherosclerosis.


Pssm-ID: 320520 [Multi-domain]  Cd Length: 273  Bit Score: 50.92  E-value: 6.15e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15398   9 FISLLGFLGNLLILTALTKKWKQKTIINFLIGNLAFSDILVVLFCSPFTLTCVLLDQWIFGEVMCHIVPFLQCVSVMVST 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLkrTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15398  89 LMLMSIAIVRYHMIKHPLSNHL--TANHGYFLLGTVWTLGFTICSP 132
7tmA_GPR3 cd15963
G protein-coupled receptor 3, member of the class A family of seven-transmembrane G ...
69-239 6.35e-07

G protein-coupled receptor 3, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320629 [Multi-domain]  Cd Length: 268  Bit Score: 50.65  E-value: 6.35e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAT-LVMPFSLanelmAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15963  18 NAIVVAVIFYTPAFRAPMFLLIGSLATADLLAGLgLILHFAF-----VYCIQSAPVNLVTVGLLAPSFTASVSSLLAITI 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPD----GAAYPQCGLNdetwyiLSSCIGSFFAPC 223
Cdd:cd15963  93 DRYLSLYNALTYYSERTVTRTYIMLILTWGASLCLGLLPVVGWNCLKDpstcSVVKPLTKNH------LVILSISFFMVF 166
                       170
                ....*....|....*.
gi 178194   224 LIMGLVYARIYRVAKR 239
Cdd:cd15963 167 ALMLQLYAQICRIVCR 182
7tmA_NAGly_R_GPR18 cd15166
N-arachidonyl glycine receptor, GPR18, member of the class A family of seven-transmembrane G ...
60-200 6.40e-07

N-arachidonyl glycine receptor, GPR18, member of the class A family of seven-transmembrane G protein-coupled receptors; N-arachidonyl glycine (NAGly), an endogenous metabolite of the endocannabinoid anandamide, has been identified as an endogenous ligand of the G(i/o) protein-coupled receptor 18 (GPR18). NAGly is involved in directing microglial migration in the CNS through activation of GPR18. NAGly-GPR18 signaling is thought to play an important role in microglial-neuronal communication. Recent studies also show that GPR18 functions as the abnormal cannabidiol (Abn-CBD) receptor. Abn-CBD is a synthetic isomer of cannabidiol and is inactive at cannabinoid receptors (CB1 or CB2), but acts as a selective agonist at GPR18. The NAGly receptor is a member of the class A G protein-coupled receptor superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. G-proteins regulate a variety of cellular functions including metabolic enzymes, ion channels, and transporters, among many others.


Pssm-ID: 320294 [Multi-domain]  Cd Length: 275  Bit Score: 50.59  E-value: 6.40e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRalRAPQNLFLVSLASADiLVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15166  11 FIIGLFVNITALWVFSCTTKK--RTTVTVYMMNVALVD-LIFILSLPFRMVYYAKDEWPFGDYFCRILGALTVFYPSIAL 87
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 178194   140 VHLCAISLDRYWSVTQAVEYN-LKRTPRRVKATIvAVWLISAVISFpPLVSLYRQPDGAAYP 200
Cdd:cd15166  88 WLLAFISADRYMAIVQPKHAKeLKNTPKAVLACV-GVWIMTLASTF-PLLFLYEDPDKASNF 147
7tmA_GPR1 cd15119
G protein-coupled receptor 1 for chemerin, member of the class A family of seven-transmembrane ...
63-187 1.19e-06

G protein-coupled receptor 1 for chemerin, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 1 (GPR1) belongs to the class A of the seven transmembrane domain receptors. This is an orphan receptor that can be activated by the leukocyte chemoattractant chemerin, thereby suggesting that some of the anti-inflammatory actions of chemerin may be mediated through GPR1. GPR1 is most closely related to another chemerin receptor CMKLR1. In an in-vitro study, GPR1 has been shown to act as a co-receptor to allow replication of HIV viruses.


Pssm-ID: 320247 [Multi-domain]  Cd Length: 278  Bit Score: 49.74  E-value: 1.19e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVvIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15119  12 VLGVPGNAIV-IWVTGFKWKKTVNTLWFLNLAIAD-FVFVLFLPLHITYVALDFhWPFGVWLCKINSFVAVLNMFASVLF 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15119  90 LTVISLDRYISLAHPVWSHRYRTLKSALILCGIVWLSAAAISGPAL 135
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
60-192 1.25e-06

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 49.67  E-value: 1.25e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIV--FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15416   7 FLVIysVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTV 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYR 192
Cdd:cd15416  87 ECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFS 141
7tmA_BK-2 cd15381
bradykinin receptor B2, member of the class A family of seven-transmembrane G protein-coupled ...
61-188 1.31e-06

bradykinin receptor B2, member of the class A family of seven-transmembrane G protein-coupled receptors; The bradykinin receptor family is a group of the seven transmembrane G-protein coupled receptors, whose endogenous ligand is the pro-inflammatory nonapeptide bradykinin that mediates various vascular and pain responses. Two major bradykinin receptor subtypes, B1 and B2, have been identified based on their pharmacological properties. The B1 receptor is rapidly induced by tissue injury and inflammation, whereas the B2 receptor is ubiquitously expressed on many tissue types. Both receptors contain three consensus sites for N-linked glycosylation in extracellular domains and couple to G(q) protein to activate phospholipase C, leading to phosphoinositide hydrolysis and intracellular calcium mobilization. They can also interact with G(i) protein to inhibit adenylate cyclase and activate the MAPK (mitogen-activated protein kinase) pathways.


Pssm-ID: 320503 [Multi-domain]  Cd Length: 284  Bit Score: 49.77  E-value: 1.31e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATlVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15381  10 IFVLGTIENAFVLIVFCLHKSSCTVAEIYLGNLAAADLLLVC-CLPFWAINISNGFnWPFGEFLCKSVNAVIYMNLYSSI 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15381  89 YFLMMVSIDRYLALVKTMSSGRMRRPACAKLNCLIIWMFGLLMSTPMIV 137
7tmA_S1PR2_Edg5 cd15347
sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial ...
385-447 1.37e-06

sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial differentiation gene 5 (Edg5), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320469 [Multi-domain]  Cd Length: 266  Bit Score: 49.81  E-value: 1.37e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   385 VVMGVFVLCWFPFFFIYSLYGICR-EACQVpgpLFK--FFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15347 204 IVLGVFIVCWLPAFIILLLDTSCKvKSCPI---LYKadYFFSVATLNSALNPVIYTLRSKDMRKEF 266
7tmA_HCAR-like cd14991
hydroxycarboxylic acid receptors and related proteins, member of the class A family of ...
67-155 1.91e-06

hydroxycarboxylic acid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the hydroxycarboxylic acid receptors (HCARs) as well as their closely related receptors, GPR31 and oxoeicosanoid receptor 1 (OXER1). HCARs are members of the class A family of G-protein coupled receptors (GPCRs). HCAR subfamily contain three receptor subtypes: HCAR1, HCAR2, and HCAR3. The endogenous ligand of HCAR1 (also known as lactate receptor 1, GPR104, or GPR81) is L-lactic acid. The endogenous ligands of HCAR2 (also known as niacin receptor 1, GPR109A, nicotinic acid receptor) and HCAR3 (also known as niacin receptor 2, orGPR109B) are 3-hydroxybutyric acid and 3-hydroxyoctanoic acid, respectively. All three HCA receptors are expressed in adipocytes, and are coupled to G(i)-proteins mediating anti-lipolytic effects in fat cells. OXER1 is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid, whereas GPR31 is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid (12-S-HETE).


Pssm-ID: 320122 [Multi-domain]  Cd Length: 280  Bit Score: 49.37  E-value: 1.91e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    67 VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATlVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd14991  16 PGNVVALWIFCFHSRTWKANTVYLFNLVLADFLLLI-CLPFRIDYYLRGeHWIFGEAWCRVNLFMLSVNRSASIAFLTAV 94
                        90
                ....*....|
gi 178194   146 SLDRYWSVTQ 155
Cdd:cd14991  95 ALDRYFKVVH 104
7tmA_PAR1 cd15369
protease-activated receptor 1, member of the class A family of seven-transmembrane G ...
69-189 2.07e-06

protease-activated receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Protease-acted receptors (PARs) are seven-transmembrane proteins that belong to the class A G-protein coupled receptor (GPCR) family. Four different types of the protease-activated receptors have been identified: PAR1, PAR2, PAR3, and PAR4. PARs are predominantly expressed in platelets and are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320491  Cd Length: 281  Bit Score: 49.38  E-value: 2.07e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15369  18 NILALVVFLRKMRVKKPAVIYMLNLACADLLFV-LLLPFKIAYHFSGNdWLFGEAMCRVVTAAFYCNMYCSILLMTCISV 96
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS 189
Cdd:cd15369  97 DRFLAVVYPMQSLSWRTLRRASFTCAAIWLLSIAGVVPLLLS 138
7tmA_ET_R cd15128
endothelin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
61-185 2.19e-06

endothelin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelins are 21-amino acid peptides which able to activate a number of signal transduction processes including phospholipase A2, phospholipase C, and phospholipase D, as well as cytosolic protein kinase activation. They play an important role in the regulation of the cardiovascular system and are the most potent vasoconstrictors identified, stimulating cardiac contraction, regulating the release of vasoactive substances, and stimulating mitogenesis in blood vessels. Two endothelin receptor subtypes have been isolated and identified in vertebrates, endothelin A receptor (ET-A) and endothelin B receptor (ET-B), and are members of the seven transmembrane class A G-protein coupled receptor family which activate multiple effectors via different types of G protein. Some vertebrates contain a third subtype, endothelin A receptor (ET-C). ET-A receptors are mainly located on vascular smooth muscle cells, whereas ET-B receptors are present on endothelial cells lining the vessel wall. Endothelin receptors have also been found in the brain.


Pssm-ID: 320256 [Multi-domain]  Cd Length: 300  Bit Score: 49.44  E-value: 2.19e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSS-- 138
Cdd:cd15128  10 IFIVGIIGNSTLLRIIYQNKCMRNGPNALIASLALGDLLYIVIDLPINVYKLLAMDWPFGDQPFGQFLCKLVPFIQKAsv 89
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 178194   139 ---IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15128  90 gitVLNLCALSVDRYRAVASWSRIQGIGIPMWTAVEIVMIWMLSAVLAVP 139
7tmA_GPR171 cd15167
orphan G protein-coupled receptor 171, member of the class A family of seven-transmembrane G ...
60-235 2.22e-06

orphan G protein-coupled receptor 171, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR171 is phylogenetically related to the P2Y family of purinergic G protein-coupled receptors. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. A recent study has been reported that the peptide LENSSPQAPARRLLPP (BigLEN) activates GPR17 to regulate body weight in mice; however the biological role of the receptor remains unknown. GPR171 is a member of the class A G protein-coupled receptor superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A common feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. G-proteins regulate a variety of cellular functions including metabolic enzymes, ion channels, and transporters, among many others.


Pssm-ID: 320295 [Multi-domain]  Cd Length: 282  Bit Score: 48.99  E-value: 2.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANEL-MAYWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15167   7 YYLIFLIgfIGSCFALWAFIQKRSSRKCINIYLINLLTADFLL-TLALPVKIAVDLgIAPWKLKIFHCQVTACLIYINMY 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDET----WYIL 212
Cdd:cd15167  86 LSIIFLGFVSIDRYLQLTHSSKLYRIQEPGFAKMISAVVWTLVLFIMVPNMAIPIKTIEEKPGVGCADFKTEfgrhWHVL 165
                       170       180
                ....*....|....*....|....*....
gi 178194   213 SS--CIGSFF-APCLIM---GLVYARIYR 235
Cdd:cd15167 166 TNfiCMAIFLnFSAIILisnFLVIRKLYR 194
7tmA_Bradykinin_R cd15189
bradykinin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
61-188 2.55e-06

bradykinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The bradykinin receptor family is a group of the seven transmembrane G-protein coupled receptors, whose endogenous ligand is the pro-inflammatory nonapeptide bradykinin that mediates various vascular and pain responses. Two major bradykinin receptor subtypes, B1 and B2, have been identified based on their pharmacological properties. The B1 receptor is rapidly induced by tissue injury and inflammation, whereas the B2 receptor is ubiquitously expressed on many tissue types. Both receptors contain three consensus sites for N-linked glycosylation in extracellular domains and couple to G(q) protein to activate phospholipase C, leading to phosphoinositide hydrolysis and intracellular calcium mobilization. They can also interact with G(i) protein to inhibit adenylate cyclase and activate the MAPK (mitogen-activated protein kinase) pathways.


Pssm-ID: 320317 [Multi-domain]  Cd Length: 284  Bit Score: 49.00  E-value: 2.55e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPF---SLANELMayWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15189  10 LCLFGLLGNLFVLLVFLLHRRRLTVAEIYLGNLAAAD-LVFVSGLPFwamNILNQFN--WPFGELLCRVVNGVIKVNLYT 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15189  87 SIYLLVMISQDRYLALVKTMAARRLRRRRYAKLICVLIWVVGLLLSIPTFL 137
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
69-239 2.58e-06

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 48.77  E-value: 2.58e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAT-LVMPFslaneLMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd15962  18 NAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCgLILNF-----VFQYVIQSETISLITVGFLVASFTASVSSLLAITV 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAypqCG----LNDETWYILSScigSFFAPC 223
Cdd:cd15962  93 DRYLSLYNALTYYSEKTVLGVHLMLAATWGVSLCLGLLPVLGWNCLEERAS---CSivrpLTKSNVTLLSA---SFFFIF 166
                       170
                ....*....|....*.
gi 178194   224 LIMGLVYARIYRVAKR 239
Cdd:cd15962 167 ILMLHLYIKICKIVCR 182
7tmA_ETBR-LP2 cd15126
endothelin B receptor-like protein 2, member of the class A family of seven-transmembrane G ...
61-188 2.69e-06

endothelin B receptor-like protein 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelin B receptor-like protein 2, also called GPR37L1, is almost exclusively expressed in the nervous system. It has recently been shown to act as a receptor for the neuropeptide prosaptide, the active fragment of the secreted neuroprotective and glioprotective factor prosaposin (also called sulfated glycoprotein-1). Both prosaptide and prosaposin protect primary astrocytes against oxidative stress. GPR37L1 is part of the class A family of GPCRs that includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320254  Cd Length: 298  Bit Score: 49.09  E-value: 2.69e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15126   8 LVVFAVgiVGNLSVMCIVWHSYYLKSAWNSILASLALWDFLVLFFCLPVVVFNEITKKRLLGDVSCRVVPYMEVTSLGVT 87
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   139 IVHLCAISLDRYWSVTQAveynlKRTPRRVK------ATIVAVWLISAVISFPPLV 188
Cdd:cd15126  88 TFSLCALGIDRFHAATSP-----QPKARPVErcqsilAKLAVIWVGSMTLAVPELL 138
7tmA_CCR3 cd15185
CC chemokine receptor type 3, member of the class A family of seven-transmembrane G ...
60-239 2.87e-06

CC chemokine receptor type 3, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR3 is a highly promiscuous receptor that binds a variety of inflammatory CC-type chemokines, including CCL11 (eotaxin-1), CCL3L1, CCL5 (regulated on activation, normal T cell expressed and secreted; RANTES), CCL7 (monocyte-specific chemokine 3 or MCP-3), CCL8 (MCP-2), CCL11, CCL13 (MCP-4), CCL15, CCL24 (eotaxin-2), CCL26 (eotaxin-3), and CCL28. Among these, the eosinophil chemotactic chemokines (CCL11, CCL24, and CCL26) are the most potent and specific ligands. In addition to eosinophil, CCR3 is expressed on cells involved in allergic responses, such as basophils, Th2 lymphocytes, and mast cells. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341339 [Multi-domain]  Cd Length: 278  Bit Score: 48.67  E-value: 2.87e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15185   7 YSLVFIVglLGNVVVVVILIKYRRLRIMTNIYLLNLAISDLLF-LFTLPFWIHYVRWNNWVFGHGMCKLLSGFYYLGLYS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPD------GAAYPQCglNDETW-- 209
Cdd:cd15185  86 EIFFIILLTIDRYLAIVHAVFALRARTVTFGIITSIITWGLAVLAALPEFIFYETQELfeeflcSPLYPED--TEDSWkr 163
                       170       180       190
                ....*....|....*....|....*....|.
gi 178194   210 -YILSSCIGSFFAPCLIMGLVYARIYRVAKR 239
Cdd:cd15185 164 fHALRMNIFGLALPLLIMVICYTGIIKTLLR 194
7tmA_FFAR cd14983
free fatty acid receptors, member of the class A family of seven-transmembrane G ...
69-252 3.24e-06

free fatty acid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the free fatty acid receptors (FFARs) which bind free fatty acids (FFAs). They belong to the class A G-protein coupled receptors and are composed of three members, each encoded by a separate gene (FFAR1, FFAR2, and FFAR3). These genes and a fourth pseudogene, GPR42, are localized together on chromosome 19. FFAR1 is a receptor for medium- and long-chain FFAs, whereas FFAR2 and FFAR3 are receptors for short chain FFAs (SCFAs), which have different ligand affinities. FFAR1 directly mediates FFA stimulation of glucose-stimulated insulin secretion and also indirectly increases insulin secretion by enhancing the release of incretin. FFAR2 activation by SCFA suppresses adipose insulin signaling, which leads to the inhibition of fat accumulation in adipose tissue. FAAR3 is expressed in intestinal L cells, which produces glucagon-like peptide 1 (GLP-1) and peptide YY (PYY), suggesting that this receptor may be involved in energy homeostasis. FFARs are considered important components of the body's nutrient sensing mechanism, and therefore, these receptors are potential therapeutic targets for the treatment of metabolic disorders, such as type 2 diabetes and obesity.


Pssm-ID: 320114 [Multi-domain]  Cd Length: 278  Bit Score: 48.58  E-value: 3.24e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVV-IAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd14983  18 NLLALyAFVNRARLRLTPNVIYMINLCLSD-LVFILSLPIKIVEALSSAWTLPAVLCPLYNLAHFSTLYASTCFLTAISA 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLIsaVISFPPLVSLYRQPDGAAYPQCGLNDE-TWY--------------IL 212
Cdd:cd14983  97 GRYLGVAFPIKYQLYKKPLYSCLVCVAIWAL--VIFHVTLVFILETSGGTLDINTPVGNSsTCYenftpeqlallapvRL 174
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 178194   213 SSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVG 252
Cdd:cd14983 175 ELSLVLFFLPLAITAFCYVRCIRILVRSRLHERRKRRAVR 214
7tmA_BK-1 cd15380
bradykinin receptor B1, member of the class A family of seven-transmembrane G protein-coupled ...
63-185 3.50e-06

bradykinin receptor B1, member of the class A family of seven-transmembrane G protein-coupled receptors; The bradykinin receptor family is a group of the seven transmembrane G-protein coupled receptors, whose endogenous ligand is the pro-inflammatory nonapeptide bradykinin that mediates various vascular and pain responses. Two major bradykinin receptor subtypes, B1 and B2, have been identified based on their pharmacological properties. The B1 receptor is rapidly induced by tissue injury and inflammation, whereas the B2 receptor is ubiquitously expressed on many tissue types. Both receptors contain three consensus sites for N-linked glycosylation in extracellular domains and couple to G(q) protein to activate phospholipase C, leading to phosphoinositide hydrolysis and intracellular calcium mobilization. They can also interact with G(i) protein to inhibit adenylate cyclase and activate the MAPK (mitogen-activated protein kinase) pathways.


Pssm-ID: 320502 [Multi-domain]  Cd Length: 286  Bit Score: 48.64  E-value: 3.50e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELMAY-WYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15380  12 FFGLLGNLFVLFVFLLPRRRLTIAEIYLANLAASD-LVFVLGLPFWAENIRNQFnWPFGNFLCRVISGVIKANLFISIFL 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15380  91 VVAISQDRYRTLVHTMTSRRQRSRRQAQVICLLIWVFGGLLSIP 134
7tmA_GPR39 cd15135
G protein-coupled receptor 39, member of the class A family of seven-transmembrane G ...
90-200 3.81e-06

G protein-coupled receptor 39, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR39 is an orphan G protein-coupled receptor that belongs to the growth hormone secretagogue and neurotensin receptor subfamily. GPR39 is expressed in peripheral tissues such as pancreas, gut, gastrointestinal tract, liver, kidney as well as certain regions of the brain. The divalent metal ion Zn(2+) has been shown to be a ligand capable of activating GPR39. Thus, it has been suggested that GPR39 function as a G(q)-coupled Zn(2+)-sensing receptor which involved in the regulation of endocrine pancreatic function, body weight, gastrointestinal mobility, and cell death.


Pssm-ID: 320263 [Multi-domain]  Cd Length: 320  Bit Score: 48.64  E-value: 3.81e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    90 LVSLASADILVATLVMPFSLANELMA--YWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRtPRR 167
Cdd:cd15135  42 MVSLACSDLLVLLLGMPVELYSAIWDpfATPSGNIACKIYNFLFEACSYATILNVATLSFERYIAICHPFKYKALS-GSR 120
                        90       100       110
                ....*....|....*....|....*....|...
gi 178194   168 VKATIVAVWLISAVISFPPLVSLyrqpdGAAYP 200
Cdd:cd15135 121 VRLLICFVWLTSALVALPLLFAM-----GTEDP 148
7tmA_Encephalopsin cd15078
encephalopsins (opsin-3), member of the class A family of seven-transmembrane G ...
66-241 4.37e-06

encephalopsins (opsin-3), member of the class A family of seven-transmembrane G protein-coupled receptors; Encephalopsin, also called Opsin-3 or Panopsin, is a mammalian extra-retinal opsin that is highly localized in the brain. It is thought to play a role in encephalic photoreception. Encephalopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320206 [Multi-domain]  Cd Length: 279  Bit Score: 48.29  E-value: 4.37e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15078  15 VCNNLLVLILYYKFKRLRTPTNLLLVNISLSDLLVSLLGVTFTFMSCVRGRWVFDVAGCVWDGFSNSLFGIVSIMTLTVL 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEYNLKRTPRrvkaTIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLN------DETWYILSSCIGSF 219
Cdd:cd15078  95 AYERYIRVVHAKVVNFSWSWR----AITYIWLYSLAWTGAPLLGWNRYTLEVHGLGCSFDwkskdpNDTSFVLLFFLGCL 170
                       170       180
                ....*....|....*....|...
gi 178194   220 FAPCLIMGLVYARI-YRVAKRRT 241
Cdd:cd15078 171 VVPLGIMAYCYGHIlYEIRMLRS 193
7tmA_GPR15 cd15194
G protein-coupled receptor 15, member of the class A family of seven-transmembrane G ...
66-235 4.45e-06

G protein-coupled receptor 15, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR15, also called as Brother of Bonzo (BOB), is an orphan G-protein coupled receptor that was originally identified as a co-receptor for human immunodeficiency virus. GPR15 is upregulated in patients with rheumatoid arthritis and shares high sequence homology with angiotensin II type AT1 and AT2 receptors; however, its endogenous ligand is unknown. GPR15 controls homing of T cells, especially FOXP3(+) regulatory T cells, to the large intestine mucosa and thereby mediates local immune homeostasis. Moreover, GRP15-deficient mice were shown to be prone to develop more severe large intestine inflammation.


Pssm-ID: 320322 [Multi-domain]  Cd Length: 281  Bit Score: 48.31  E-value: 4.45e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANEL-MAYWYFGQVWCGVYLALDVLFCTSSIVHLCA 144
Cdd:cd15194  15 AVGNAILMGALVFKRGVRRLIDIFISNLAASD-FIFLVTLPLWVDKEVvLGPWRSGSFLCKGSSYIISVNMYCSVFLLTC 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   145 ISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVS-LYRQPDGAAY--PQCGLNDETWYILSSCIGSFFA 221
Cdd:cd15194  94 MSLDRYLAIVLPLVSRKFRTKHNAKVCCTCVWMLSCLLGLPTLLSrELKKYEEKEYcnEDAGTPSKVIFSLVSLIVAFFL 173
                       170
                ....*....|....
gi 178194   222 PCLIMGLVYARIYR 235
Cdd:cd15194 174 PLLSILTCYCTIIW 187
7tmA_FFAR2_FFAR3 cd15170
free fatty acid receptors 2, 3, and similar proteins, member of the class A family of ...
60-180 4.51e-06

free fatty acid receptors 2, 3, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes free fatty acid receptor 2 (FFAR2), FFAR3, and similar proteins. They are a member of the class A G-protein coupled receptors that bind free fatty acids. The FFAR subfamily is composed of three receptors, each encoded by a separate gene (FFAR1, FFAR2, and FFAR3). These genes and a fourth pseudogene, GPR42, are localized together on chromosome 19. FFAR2 and FFAR3 are cell-surface receptors for short chain FFAs (SCFAs) with different ligand affinities, whereas FFAR1 is a receptor for medium- and long-chain FFAs. FFAR2 activation by SCFA suppresses adipose insulin signaling, which leads to inhibition of fat accumulation in adipose tissue. FAAR3 is expressed in intestinal L cells, which produces glucagon-like peptide 1 (GLP-1) and peptide YY (PYY), thus suggesting that this receptor may be involved in energy homeostasis. FFARs are considered important components of the body's nutrient sensing mechanism, and therefore, these receptors are potential therapeutic targets for the treatment of metabolic disorders, such as type 2 diabetes and obesity.


Pssm-ID: 320298  Cd Length: 278  Bit Score: 48.02  E-value: 4.51e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTvvGNVLVVIAVLTS-RALRAPQNLFLVSLASADILVaTLVMPFSLANELMAY-WYFGQVWCGvyLALDVLFCT- 136
Cdd:cd15170  11 FLIGLP--ANLLAFYTFIRKvRRKPTPIDILLLNLTVSDLIF-LLFLPFKMAEAASGMiWPLPYFLCP--LSSFIFFSTi 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   137 -SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISA 180
Cdd:cd15170  86 yISTLFLTAISVERYLGVAFPIKYKLRRRPLYAVIASVFFWVLAF 130
7tmA_Glyco_hormone_R cd15136
glycoprotein hormone receptors, member of the class A family of seven-transmembrane G ...
60-247 4.95e-06

glycoprotein hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors (GPHRs) are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG) and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. GPHRs couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein.


Pssm-ID: 320264 [Multi-domain]  Cd Length: 275  Bit Score: 47.98  E-value: 4.95e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAT--LVMPFSLANELMAYWYFGQVW-----CGVYLALDV 132
Cdd:cd15136   9 FVFLLALVGNIIVLLVLLTSRTKLTVPRFLMCNLAFADFCMGIylGLLAIVDAKTLGEYYNYAIDWqtgagCKTAGFLAV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL--VSLYRqpdgaAYPQC-----GLN 205
Cdd:cd15136  89 FSSELSVFTLTVITLERWYAITHAMHLNKRLSLRQAAIIMLGGWIFALIMALLPLvgVSSYS-----KTSIClpfetETP 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 178194   206 DETWYILSSCIGSFFAPCLIMGLvYARIYRVAKRRTRTLSEK 247
Cdd:cd15136 164 VSKAYVIFLLLFNGLAFLIICGC-YIKIYLSVRGSGRAANSN 204
7tmA_Retinal_GPR cd15072
retinal G protein coupled receptor, member of the class A family of seven-transmembrane G ...
69-150 4.98e-06

retinal G protein coupled receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the retinal G-protein coupled receptor (RGR) found exclusively in retinal pigment epithelium (RPE) and Muller cells. RGR is a member of the class A rhodopsin-like receptor family. As with other opsins, RGR binds all-trans retinal and contains a conserved lysine reside on the seventh helix. RGR functions as a photoisomerase to catalyze the conversion of all-trans-retinal to 11-cis-retinal. Two mutations in RGR gene are found in patients with retinitis pigmentosa, indicating that RGR is essential to the visual process.


Pssm-ID: 320200 [Multi-domain]  Cd Length: 260  Bit Score: 47.74  E-value: 4.98e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAT--LVMPFSlanELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAIS 146
Cdd:cd15072  18 NGLTILSFCKTRELRTPSNLLVLSLAVADMGISLnaLVAASS---SLLRRWPYGSEGCQAHGFQGFFTALASICSSAAIA 94

                ....
gi 178194   147 LDRY 150
Cdd:cd15072  95 WDRY 98
7tmA_LWS_opsin cd15081
long wave-sensitive opsins, member of the class A family of seven-transmembrane G ...
60-192 5.49e-06

long wave-sensitive opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Long Wave-Sensitive opsin is also called red-sensitive opsin or red cone photoreceptor pigment, which mediates visual transduction in response to light at long wavelengths. Vertebrate cone opsins are expressed in cone photoreceptor cells of the retina and involved in mediating photopic vision, which allows color perception. The cone opsins can be classified into four classes according to their peak absorption wavelengths: SWS1 (ultraviolet sensitive), SWS2 (short wave-sensitive), MWS/LWS (medium/long wave-sensitive), and RH2 (medium wave-sensitive, rhodopsin-like opsins). Members of this group belong to the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320209 [Multi-domain]  Cd Length: 292  Bit Score: 47.98  E-value: 5.49e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCgVYLALDVLFC-TSS 138
Cdd:cd15081  21 FVVFASVFTNGLVLVATLKFKKLRHPLNWILVNLAIADLGETVIASTISVVNQIFGYFILGHPMC-VLEGFTVSVCgITG 99
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 178194   139 IVHLCAISLDRyWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYR 192
Cdd:cd15081 100 LWSLTIISWER-WVVVCKPFGNIKFDGKLAIVGIIFSWVWSAVWCAPPIFGWSR 152
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
60-184 7.14e-06

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 47.30  E-value: 7.14e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15915   9 LLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEA 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15915  89 MLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHAL 133
7tmA_ET-CR cd15977
endothelin C receptor, member of the class A family of seven-transmembrane G protein-coupled ...
61-185 7.14e-06

endothelin C receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelins are able to activate a number of signal transduction processes including phospholipase A2, phospholipase C, and phospholipase D, as well as cytosolic protein kinase activation. They play an important role in the regulation of the cardiovascular system and are the most potent vasoconstrictors identified, stimulating cardiac contraction, regulating the release of vasoactive substances, and stimulating mitogenesis in blood vessels. Two endothelin receptor subtypes have been isolated and identified in vertebrates, endothelin A receptor (ET-A) and endothelin B receptor (ET-B), and are members of the seven transmembrane class A G-protein coupled receptor family which activate multiple effectors via different types of G protein. Some vertebrates contain a third subtype, endothelin A receptor (ET-C). ET-A receptors are mainly located on vascular smooth muscle cells, whereas ET-B receptors are present on endothelial cells lining the vessel wall. Endothelin receptors have also been found in the brain. The ET-C receptor is specific for endothelin-3 on frog dermal melanophores; its activation causes dispersion of pigment granules.


Pssm-ID: 320643 [Multi-domain]  Cd Length: 296  Bit Score: 47.59  E-value: 7.14e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15977  10 IFLVGIIGNSTLLRIIYKNKCMRNGPNVLIASLALGDLLYILIAIPINVIKLIAEDWPFGVHVCKLYPFIQKASVGITVL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15977  90 SLCALSIDRYRAVASWSRIRGIGIPVWKAVEVTLIWAVAIIVAVP 134
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
60-205 8.88e-06

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 47.09  E-value: 8.88e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELM-------------AYWYFgqvwc 124
Cdd:cd15912   7 LLLTYllTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSgkktisfagcfaqSFFYF----- 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   125 gvylaldvLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRqpdgaaYPQCGL 204
Cdd:cd15912  82 --------FLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQ------LPFCGP 147

                .
gi 178194   205 N 205
Cdd:cd15912 148 N 148
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
60-183 9.00e-06

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 47.06  E-value: 9.00e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIV--FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYW---YFGqvwCGVYLALDVLF 134
Cdd:cd15227   7 FLLIylAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRsisFLG---CVAQVFLFIFF 83
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   135 CTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVIS 183
Cdd:cd15227  84 AASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYG 132
7tmA_GPR37 cd15127
G protein-coupled receptor 37, member of the class A family of seven-transmembrane G ...
66-188 1.04e-05

G protein-coupled receptor 37, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR37, also called parkin-associated endothelin-like receptor (Pael-R), was isolated from a set of human brain frontal lobe expressed sequence tags. It is highly expressed in the mammalian CNS. It is a substrate of parkin and is involved in the pathogenesis of Parkinson's disease. GPR37 has recently been shown to act as a receptor for the neuropeptide prosaptide, the active fragment of the secreted neuroprotective and glioprotective factor prosaposin (also called sulfated glycoprotein-1). Both prosaptide and prosaposin protect primary astrocytes against oxidative stress. GPR37 is part of the class A family of GPCRs that includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320255 [Multi-domain]  Cd Length: 298  Bit Score: 47.16  E-value: 1.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15127  15 IMGNVAVMCIVCHNYYMRSISNSLLANLAFWDFLIIFFCLPLVIFHELTKKWLLGDFSCKIVPYIEVASLGVTTFTLCAL 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 178194   146 SLDRYWSVTQA-VEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15127  95 CIDRFRAATNVqMYYEMIENCTSTTAKLAVIWVGALLLALPEVV 138
7tmA_P2Y8 cd15368
purinergic receptor P2Y8, member of the class A family of seven-transmembrane G ...
61-185 1.17e-05

purinergic receptor P2Y8, member of the class A family of seven-transmembrane G protein-coupled receptors; P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320490 [Multi-domain]  Cd Length: 281  Bit Score: 47.07  E-value: 1.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATlVMPFSLANELMAY-WYFGQVWCGVylaLDVLFCT--- 136
Cdd:cd15368  10 VALISIPGNLFSLWLLCFHTKPKTPSIIFMINLSLTDLMLAC-FLPFQIVYHIQRNhWIFGKPLCNV---VTVLFYAnmy 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15368  86 SSILTMTCISIERYLGVVYPMRSMRWRKKRYAVAACIGMWLLVLTALSP 134
7tmA_S1PR5_Edg8 cd15348
sphingosine-1-phosphate receptor subtype 5 (S1PR5 or S1P5), also called endothelial ...
383-444 1.18e-05

sphingosine-1-phosphate receptor subtype 5 (S1PR5 or S1P5), also called endothelial differentiation gene 8 (Edg8), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320470 [Multi-domain]  Cd Length: 277  Bit Score: 46.74  E-value: 1.18e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   383 LAVVMGVFVLCWFPFFFIYSLYGICR-EACQVpgpLFK--FFFWIGYCNSSLNPVIYTVFNQDFR 444
Cdd:cd15348 213 VTIVLGTFVACWLPLFLLLLLDVSCPaQACPV---LLKadYFLGLAMINSLLNPIIYTLTSRDMR 274
7tmA_GPR185-like cd15960
G protein-coupled receptor 185 and similar proteins, member of the class A family of ...
62-261 1.21e-05

G protein-coupled receptor 185 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR185, also called GPRx, is a member of the constitutively active GPR3/6/12 subfamily of G protein-coupled receptors. It plays a role in the maintenance of meiotic arrest in Xenopus laevis oocytes through G(s) protein, which leads to increased cAMP levels. In Xenopus laevis, GPR185 is primarily expressed in brain, ovary, and testis; however, its ortholog has not been identified in other vertebrate genomes. GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest.


Pssm-ID: 320626 [Multi-domain]  Cd Length: 268  Bit Score: 46.81  E-value: 1.21e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVL-----VVIAVL-TSRALRAPQNLFLVSLASADIL-----VATLVMPFSLANELMAYwyfgqvwCGVYLAL 130
Cdd:cd15960   5 IALCVTGTVMacenaIVIAILfYTPSLRAPMFILIGSLALADLLaglglIANFVAIYVMNSEAVTL-------CSAGLLL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   131 DVLfcTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCG-LNDETW 209
Cdd:cd15960  78 AAF--SASVCSLLAITVDRYLSLYNALTYHTERTLTFTYGLLALLWLTCIGIGLLPAMGWNCLRAPASCSVLRpVTKNNA 155
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   210 YILSSCIGSFFApcLIMGLvYARIYRVAKRRTRTLSEKRAPVGPDGASPTTE 261
Cdd:cd15960 156 AVLAVSFLLLFA--LMMQL-YLQICRIAFRHAQQIAVQHQFVNFCLASSTRK 204
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
61-228 1.32e-05

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 46.78  E-value: 1.32e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15084  20 VVALASFVNGLVIVVSIKYKKLRSPLNYILVNLAVADLLVTLFGSSVSFSNNIVGFFVFGKTMCEFEGFMVSLTGIVGLW 99
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAV-EYNLKRtpRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNdetWYI----LSSC 215
Cdd:cd15084 100 SLAILAFERYLVICKPMgDFRFQQ--RHAVSGCAFTWGWSLLWTSPPLFGWSSYVPEGLRTSCGPN---WYTggtnNNSY 174
                       170
                ....*....|...
gi 178194   216 IGSFFAPCLIMGL 228
Cdd:cd15084 175 ILALFVTCFALPL 187
7tmA_PAR2 cd15370
protease-activated receptor 2, member of the class A family of seven-transmembrane G ...
60-238 1.32e-05

protease-activated receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Protease-acted receptors (PARs) are seven-transmembrane proteins that belong to the class A G-protein coupled receptor (GPCR) family. Four different types of the protease-activated receptors have been identified: PAR1, PAR2, PAR3, and PAR4. PARs are predominantly expressed in platelets and are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341349 [Multi-domain]  Cd Length: 280  Bit Score: 46.71  E-value: 1.32e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVV--GNVLVVIAVLTSRALRAPQNLFLVSLASADILvATLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCT 136
Cdd:cd15370   7 YIIVFVVGlpSNAMALWVFLFRTKKKHPAVIYMANLALADLL-FVIWFPLKIAYHINGnNWIYGEALCKVLIGFFYGNMY 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTQAVEYNlKRTPRRVKATIVAVWLISAVISFPplVSLYRQ----PD-------GAAYPQCGLN 205
Cdd:cd15370  86 CSILFMTCLSVQRYWVIVNPMSHS-RKKANIAIGISLAIWLLILLVTIP--LYLVKQtvfiPAldittchDVLPEQLLVG 162
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   206 DETWYILSSCIGSFFAPCLIMGLVYARIYRVAK 238
Cdd:cd15370 163 DMFNYFLSLAIGVFLFPAFLTAVAYVLMIRALK 195
7tmA_C5aR cd15114
complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of ...
66-252 1.60e-05

complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320242 [Multi-domain]  Cd Length: 274  Bit Score: 46.24  E-value: 1.60e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVViAVLTSRALRAPQNLFLVSLASADILvATLVMPFsLANELM--AYWYFGQVWCGVYLALDVLFCTSSIVHLC 143
Cdd:cd15114  15 VPGNALVA-WVTGFEAKRSVNAVWFLNLAVADLL-CCLSLPI-LAVPIAqdGHWPFGAAACKLLPSLILLNMYASVLLLT 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQPDGAAYP---QCGLN-------DETWYILS 213
Cdd:cd15114  92 AISADRCLLVLRPVWCQNHRRARLAWIACGAAWLLALLLTVPSFI--YRRIHQEHFPektVCVVDyggstgvEWAVAIIR 169
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 178194   214 SCIGsFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVG 252
Cdd:cd15114 170 FLLG-FLGPLVVIASCHGVLLVRTWSRRRQKSRRTLKVV 207
7tmA_LPAR2_Edg4 cd15342
lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial ...
375-447 1.68e-05

lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial differentiation gene 4 (Edg4), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320464 [Multi-domain]  Cd Length: 274  Bit Score: 46.33  E-value: 1.68e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   375 REKRFTFVLAVVM--GVFVLCWFPFFFIYSLYGICREACQVPGpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15342 201 RETVLGLMKTVVIilGAFVVCWTPGQVVLLLDGLGCESCNVLA-YEKYFLLLAEINSLVNPIVYSYRDKEMRKTF 274
7tmA_S1PR1_Edg1 cd15346
sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial ...
385-447 1.69e-05

sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320468 [Multi-domain]  Cd Length: 277  Bit Score: 46.41  E-value: 1.69e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   385 VVMGVFVLCWFPFFFIYSLYGICR-EACQVpgpLFK--FFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15346 215 IVLSVFIACWAPLFILLLLDVGCKvKTCSI---LFKaeYFLVLAVLNSATNPIIYTLTNKEMRRAF 277
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
60-194 1.72e-05

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 46.27  E-value: 1.72e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIV--FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15424   7 ILIIylLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGST 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP 194
Cdd:cd15424  87 ECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHP 143
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
62-242 2.62e-05

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 45.53  E-value: 2.62e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAVLTSRALR--APqNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15219  10 LVVSLLSNLLVLLCFLYSAELRkqVP-GIFLLNLSFCNLLLTVLNMPFTLLGVVRNRQPFGDGFCQAVGFLETFLTSNAM 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISavISFpPLVSLYRQPDG--AAYPQCGLNDE--------TW 209
Cdd:cd15219  89 LSMAALSIDRWIAVVFPLSYTSKMRYRDAALMVGYSWLHS--LTF-SLVALFLSWLGysSLYASCTLHLPreeerrrfAV 165
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   210 YILSSCIGSFFAPCLIMGLVYARIYRVaKRRTR 242
Cdd:cd15219 166 FTAFFHAFTFLLSLLVLCVTYLKVLKV-RRRQR 197
7tmA_S1PR3_Edg3 cd15345
sphingosine-1-phosphate receptor subtype 3 (S1PR3 or S1P3), also called endothelial ...
385-447 2.73e-05

sphingosine-1-phosphate receptor subtype 3 (S1PR3 or S1P3), also called endothelial differentiation gene 3 (Edg3), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320467 [Multi-domain]  Cd Length: 270  Bit Score: 45.58  E-value: 2.73e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   385 VVMGVFVLCWFPFFFIYSLYGICR-EACQVpgpLFK--FFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15345 208 IVVGVFIACWSPLFILLLIDVACEvKQCPI---LYKadWFIALAVLNSAMNPIIYTLASKEMRRAF 270
7tmA_LTB4R2 cd15122
leukotriene B4 receptor subtype 2 (LTB4R2 or BLT2), member of the class A family of ...
68-193 2.79e-05

leukotriene B4 receptor subtype 2 (LTB4R2 or BLT2), member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the Gq-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320250 [Multi-domain]  Cd Length: 281  Bit Score: 45.56  E-value: 2.79e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    68 GNVLVVIAVLTSRALRAPQ--NLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15122  17 GNGFIIWSILWKMKARGRSvtCILILNLAVADGAV-LLLTPFFITFLTRKTWPFGQAVCKAVYYLCCLSMYASIFIIGLM 95
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   146 SLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQ 193
Cdd:cd15122  96 SLDRCLAVTRPYLAQSLRKKALVRKILLAIWLLALLLALPAFV--YRH 141
PHA02638 PHA02638
CC chemokine receptor-like protein; Provisional
60-185 3.56e-05

CC chemokine receptor-like protein; Provisional


Pssm-ID: 165021 [Multi-domain]  Cd Length: 417  Bit Score: 45.77  E-value: 3.56e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194     60 FLIVFTV--VGNVLVVIaVLTSRALRAPQNLFLVSLASADiLVATLVMPFSLANELmAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:PHA02638 105 YIIIFILglFGNAAIIM-ILFCKKIKTITDIYIFNLAISD-LIFVIDFPFIIYNEF-DQWIFGDFMCKVISASYYIGFFS 181
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 178194    138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:PHA02638 182 NMFLITLMSIDRYFAILYPISFQKYRTFNIGIILCIISWILSLIITSP 229
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
60-203 3.63e-05

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 45.48  E-value: 3.63e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPfslanELMAYWYFGQVWCGVYLALDVLFC--TS 137
Cdd:cd15950   9 SMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVP-----KMLSIFWLGSAEISFEACFTQMFFvhSF 83
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   138 SIVH---LCAISLDRYWSVTQAVEYNLKRTPRRVkATIVAVWLISAVISFPPLVSLYRQpdgaaYPQCG 203
Cdd:cd15950  84 TAVEsgvLLAMAFDRYVAICHPLRYSAILTSQVI-AQIGLAIVLRALLFMTPLTCLVTS-----LPYCG 146
7tmA_P2Y6_P2Y3-like cd15968
P2Y purinoceptors 6 and 3, and similar proteins, member of the class A family of ...
60-188 3.66e-05

P2Y purinoceptors 6 and 3, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes P2Y receptor 6 (P2Y6), P2Y3, and P2Y3-like proteins. These receptors belong to the G(i) class of a family of purinergic G-protein coupled receptors. In the CNS, P2Y6 plays a role in microglia activation and phagocytosis, and is involved in the secretion of interleukin from monocytes and macrophages in the immune system. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320634 [Multi-domain]  Cd Length: 285  Bit Score: 45.54  E-value: 3.66e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAtLVMPFSLANELMA-YWYFGQVWCGV--YLALDVLFCt 136
Cdd:cd15968   9 FVFLLGLPLNSVVLTRCCRHTKAWTRTAIYMVNLALADLLYA-LSLPLLIYNYAMRdRWLFGDFMCRLvrFLFYFNLYG- 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 178194   137 sSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15968  87 -SILFLTCISVHRYLGICHPMRPWHKETRRAAWLTCVLVWILVFAQTLPILI 137
7tmA_HCAR-like cd14991
hydroxycarboxylic acid receptors and related proteins, member of the class A family of ...
373-447 3.98e-05

hydroxycarboxylic acid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the hydroxycarboxylic acid receptors (HCARs) as well as their closely related receptors, GPR31 and oxoeicosanoid receptor 1 (OXER1). HCARs are members of the class A family of G-protein coupled receptors (GPCRs). HCAR subfamily contain three receptor subtypes: HCAR1, HCAR2, and HCAR3. The endogenous ligand of HCAR1 (also known as lactate receptor 1, GPR104, or GPR81) is L-lactic acid. The endogenous ligands of HCAR2 (also known as niacin receptor 1, GPR109A, nicotinic acid receptor) and HCAR3 (also known as niacin receptor 2, orGPR109B) are 3-hydroxybutyric acid and 3-hydroxyoctanoic acid, respectively. All three HCA receptors are expressed in adipocytes, and are coupled to G(i)-proteins mediating anti-lipolytic effects in fat cells. OXER1 is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid, whereas GPR31 is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid (12-S-HETE).


Pssm-ID: 320122 [Multi-domain]  Cd Length: 280  Bit Score: 45.13  E-value: 3.98e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   373 QAREKRFTFVLAVVMGVFVLCWFP------FFFIYSLYGICREACQVPGpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPS 446
Cdd:cd14991 201 QARVQRAIRLVFLVVIVFVLCFLPsiiaglLALVFKNLGSCRCLNSVAQ-LFHISLAFTYLNSALDPVIYCFSSPWFRNS 279

                .
gi 178194   447 F 447
Cdd:cd14991 280 L 280
7tmA_LPAR6_P2Y5 cd15156
lysophosphatidic acid receptor 6, member of the class A family of seven-transmembrane G ...
60-185 3.98e-05

lysophosphatidic acid receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; Lysophosphatidic acid receptor 6 (LPAR6), also known as P2Y5, is a G(i), G(12/13) G protein-coupled receptor that is activated by the bioactive lipid lysophosphatidic acid (LPA), which is released by activated platelets and constitutively present in serum. LPAR6 plays an important role in maintenance of human hair growth. Thus, mutations in the receptor are responsible for both autosomal recessive wooly hair and hypotrichosis. Phylogenetic analysis of the class A GPCRs shows that LAPR6 (P2Y5) is classified into the cluster consisting of receptors that are preferentially activated by adenosine and uridine nucleotides. Although LPA6 (P2Y5) is expressed in human hair follicle cells, LPA4 and LPA5 are not. These three receptors are highly homologous and mediate an increase in intracellular cAMP production.


Pssm-ID: 320284 [Multi-domain]  Cd Length: 285  Bit Score: 45.23  E-value: 3.98e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15156   7 FSMVFVLglIANCVAIYIFMCTLKVRNETTTYMINLAISDLLF-VFTLPFRIFYFVQRNWPFGDLLCKISVTLFYTNMYG 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15156  86 SILFLTCISVDRFLAIVYPFRSKTLRTKRNAKIVCAAVWLTVLAGSLP 133
7tmA_GPR87 cd15969
G protein-coupled receptor 87, member of the class A family of seven-transmembrane G ...
88-250 4.19e-05

G protein-coupled receptor 87, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR87 acts as one of multiple receptors for lysophosphatidic acid (LPA). This orphan receptor has been shown to be over-expressed in several malignant tumors including lung squamous cell carcinoma and regulated by p53. GPR87 is phylogenetically closely related to the G(i) class of the P2Y family of purinergic G protein-coupled receptors. P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-sugars. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase.


Pssm-ID: 320635 [Multi-domain]  Cd Length: 283  Bit Score: 45.17  E-value: 4.19e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    88 LFLVSLASADILVaTLVMPFSLANEL-MAYWYFGQVWCGVYlalDVLFCTS---SIVHLCAISLDRYWSVTQAVE----Y 159
Cdd:cd15969  36 FYLKNIVIADLLM-TLTFPFKIIQDSgLGPWNFNFFLCRYT---SVLFYASmytSIVFLGLISLDRYLKVVKPFGdsrmY 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   160 NLKRTprrvKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC----GLNDETWYILSS--CIGSFFAPCLIMGLVYA-- 231
Cdd:cd15969 112 SITFT----KVLSACVWLIMAFLSLPNIILTNGQPTEDNIHDCsklkSPLGVKWHTAVSyiNICIFVAVLVILIVCYIsi 187
                       170       180
                ....*....|....*....|.
gi 178194   232 --RIYRVAKRRTRTLSEKRAP 250
Cdd:cd15969 188 srYIYKSSKQFISSSSRTRKH 208
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
69-188 4.89e-05

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 44.83  E-value: 4.89e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALR-APQNLFLVSLASADILvATLVMPFSLANelmAYWYFGQVWCGVYL----ALDVLFcTSSIVHLC 143
Cdd:cd15341  18 NVAVLYLILSSPKLRrKPSYLFIGSLALADFL-ASVVFACSFVD---FHVFHGVDSSAIFLlklgGVTMSF-TASLGSLL 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLV 188
Cdd:cd15341  93 LMAFDRYVCIYYPSEYKALVTRKRALVALAVMWVLTALIAYLPLM 137
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
60-193 5.04e-05

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 44.95  E-value: 5.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnelmAYWyFGQVWCGVYLALDVLFC--TS 137
Cdd:cd15953   9 LMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALC----IFW-FNLKEITFSGCLTQMFFihTL 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   138 SIVH---LCAISLDRYWSVTQAVEYNLKRTPRRVkATIVAVWLISAVISFPPLVSLYRQ 193
Cdd:cd15953  84 SIMEsavLVAMAFDRYVAICNPLRYATILTNSRI-AKLGLVGLIRGVLLILPLPLLLSR 141
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
69-176 5.93e-05

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 44.77  E-value: 5.93e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAtlvMPFSLANELMAYWYFGqvwcgvYL------------ALDVLFCT 136
Cdd:cd15350  18 NLLVLVAVIKNKNLHSPMYFFICSLAVSDMLGS---LYKTLENILIILADMG------YLnrrgpfetklddIMDSLFCL 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 178194   137 S---SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVW 176
Cdd:cd15350  89 SllgSIFSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIW 131
7tmA_PGE2_EP4 cd15142
prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G ...
60-177 6.18e-05

prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP4, also called prostanoid EP4 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Like the EP2 receptor, stimulation of the EP4 receptor by PGE2 causes cAMP accumulation through G(s) protein activation. Knockout studies in mice suggest that EP4 receptor may be involved in the maintenance of bone mass and fracture healing. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320270 [Multi-domain]  Cd Length: 302  Bit Score: 44.80  E-value: 6.18e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLF-LV-SLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15142   9 VMFIFGVVGNLIAIVVLCKSRKEQKETTFYtLVcGLAVTDLLGTCLASPVTIATYLKGRWPGGQPLCEYFSFILLFFSLS 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWL 177
Cdd:cd15142  89 GLSIICAMSIERYLAINHAYFYNHYVDKRLAGLTLFAIYA 128
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
64-249 6.38e-05

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 44.38  E-value: 6.38e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    64 FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-----VATLVMPFSLANELM-AYWYFGQvwCGVYLALdvlfcTS 137
Cdd:cd15102  13 FIVLENLLVLIAIWRHMKFHRPMYYFLGNLALSDLLagaayLANILLSGARTLRLSpAQWFLRE--GSMFVAL-----SA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTpRRVKATIVAVWLISAVISFPPLVSLYRQpdgAAYPQCGLNDETW---YILsS 214
Cdd:cd15102  86 SVFSLLAIAIERHLTMAKMKPYGASKT-SRVLLLIGACWLISLLLGGLPILGWNCL---GALDACSTVLPLYskhYVL-F 160
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   215 CIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15102 161 CVTIFAGILAAIVALYARIYCLVRASGRKATRASA 195
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
60-184 7.23e-05

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 44.35  E-value: 7.23e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15945  20 FLLVYllTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKSIPFYGCALQMFFFAAFADA 99
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15945 100 ECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSL 146
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
383-447 7.78e-05

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 44.38  E-value: 7.78e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   383 LAVVMGVFVLCWFPFFFIYSLYGICR-EACQVpgpLFK--FFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15102 206 VLIVLLVFIACWGPLFILLLLDVACPvKTCPI---LYKadWFLALAVLNSALNPIIYTLRSRELRRAV 270
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
60-190 8.62e-05

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 44.14  E-value: 8.62e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWY------FGQVWCGVYLALd 131
Cdd:cd15431   7 LLIVYlvTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTisysrcLAQMYISLFLGI- 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   132 vlfcTSSIVhLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd15431  86 ----TECLL-LAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPVLTM 139
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
60-181 9.52e-05

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 44.00  E-value: 9.52e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15944  20 FLIIYlvNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKVISFSGCATQFAFFVGFVDA 99
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAV 181
Cdd:cd15944 100 ECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLV 143
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
66-249 1.07e-04

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 44.04  E-value: 1.07e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    66 VVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAI 145
Cdd:cd15385  15 VIGNSSVLLALYKTKKKASRMHLFIKHLSLADLVVAFFQVLPQLCWDITYRFYGPDFLCRIVKHLQVLGMFASTYMLVMM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   146 SLDRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPP--LVSLYRQPDGAAYPQCGLN-DETW----YILSSCIGS 218
Cdd:cd15385  95 TADRYIAICHPLK-TLQQPTKRSYLMIGSAWALSFILSTPQyfIFSLSEIENGSGVYDCWANfIVPWgikaYITWITISI 173
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   219 FFAPCLIMGLVYA----RIYRVAKRRTRTLSEKRA 249
Cdd:cd15385 174 FVVPVIILLTCYGficyNIWRNIKCKTRRGLSDNA 208
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
60-184 1.12e-04

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 43.97  E-value: 1.12e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLI--VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15940   7 FLVlyLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACT 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15940  87 EIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSL 133
7tmA_Relaxin_R cd15137
relaxin family peptide receptors, member of the class A family of seven-transmembrane G ...
63-243 1.37e-04

relaxin family peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes relaxin/insulin-like family peptide receptor 1 (RXFP1 or LGR7) and 2 (RXFP2 or LGR8), which contain a very large extracellular N-terminal domain with numerous leucine-rich repeats responsible for hormone recognition and binding. Relaxin is a member of the insulin superfamily that has diverse actions in both reproductive and non-reproductive tissues. The relaxin-like peptide family includes relaxin-1, relaxin-2, and the insulin-like (INSL) peptides such as INSL3, INSL4, INSL5 and INSL6. The relaxin family peptides share high structural but low sequence similarity, and exert their physiological functions by activating a group of four GPCRs, RXFP1-4. Relaxin and INSL3 are the endogenous ligands for RXFP1 and RXFP2, respectively. Upon receptor binding, relaxin activates a variety of signaling pathways to produce second messengers such as cAMP.


Pssm-ID: 320265 [Multi-domain]  Cd Length: 284  Bit Score: 43.73  E-value: 1.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELM--AYWYFGQVW-----CGVYLALDVLFC 135
Cdd:cd15137  12 IIALLGNLFVLIWRLKYKEENKVHSFLIKNLAIADFLMGVYLLIIASVDLYYrgVYIKHDEEWrsswlCTFAGFLATLSS 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 TSSIVHLCAISLDRYWSVTqaveYNLKR---TPRRVKATIVAVWLISAVISFPPLvsLYRQPDGAAYPQCG------LND 206
Cdd:cd15137  92 EVSVLILTLITLDRFICIV----FPFSGrrlGLRRAIIVLACIWLIGLLLAVLPL--LPWDYFGNFYGRSGvclplhITD 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 178194   207 ET---W-YILSSCIGSFFAPCLIMGLVYARIYRVAKRRTRT 243
Cdd:cd15137 166 ERpagWeYSVFVFLGLNFLAFVFILLSYIAMFISIRRTRKA 206
7tmA_GPR55-like cd15165
G protein-coupled receptor 55 and similar proteins, member of the class A family of ...
89-248 1.53e-04

G protein-coupled receptor 55 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR55 shares closest homology with GPR35, and they belong to the class A G protein-coupled receptor superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. GPR55 has been reported to couple to G(13), G(12), or G(q) proteins. Activation of GPR55 leads to activation of phospholipase C, RhoA, ROCK, ERK, p38MAPK, and calcium release. Lysophosphatidylinositol (LPI) is currently considered as the endogenous ligand for GPR55, although the receptor was initially de-orphanized as a cannabinoid receptor and binds many cannabinoid ligands.


Pssm-ID: 320293 [Multi-domain]  Cd Length: 277  Bit Score: 43.48  E-value: 1.53e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    89 FLVSLASADILVaTLVMPFSLanelmayWYFGQVWcgvylALDVLFCT-----------SSIVHLCAISLDRYWSVTQAV 157
Cdd:cd15165  38 YMINLALNDLLL-LLSLPFKM-------HSSKKQW-----PLGRTLCSfleslyfvnmyGSILIIVCISVDRYIAIRHPF 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   158 EYNLKRTPRrvKATIV--AVWLISAVISFpPLVSLYRQPDGAAYPQCGLNDETW---YILSSCIGSFFAPCLIMGLVYAR 232
Cdd:cd15165 105 LAKRLRSPR--KAAIVclTIWVFVWAGSI-PIYSFHDKPTNNTRCFHGFSNKTWskkVIVVVEEFGFLIPMAVMVFCSVQ 181
                       170
                ....*....|....*.
gi 178194   233 IYRVAKRRTRTLSEKR 248
Cdd:cd15165 182 IIRTLLDMRRPEQPKV 197
7tmA_LPAR cd15101
lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane ...
60-246 1.83e-04

lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341325 [Multi-domain]  Cd Length: 274  Bit Score: 43.27  E-value: 1.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL--VATLVMPFSL----ANELMAYWYFGQVWCGVYLaldvl 133
Cdd:cd15101   9 TVCIFIMLANLLVIAAIYKNRRFHFPIYYLLANLAAADFFagLAYFFLMFNTgpntRRLTVSTWFLRQGLLDTSL----- 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   134 fcTSSIVHLCAISLDRYWSVTqAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYILS 213
Cdd:cd15101  84 --TASVANLLAIAVERHISVM-RMQLHSRLSNRRVVVLIVLVWTMAIVMGAIPSVGWNCLCAIDACSNMAPLYSRSYLVF 160
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   214 SCIGSFFApCLIMGLVYARIYRVAKRRTRTLSE 246
Cdd:cd15101 161 WAISNLVT-FLVMVVVYARIFVYVRRRTNRMSP 192
7tmA_LPAR cd15101
lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane ...
385-447 1.88e-04

lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341325 [Multi-domain]  Cd Length: 274  Bit Score: 43.27  E-value: 1.88e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 178194   385 VVMGVFVLCWFPFFFIYSLYGICREACQVPGpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15101 213 IVLGAFVVCWTPGLVVLLLDGLCCRQCNVLA-VEKFFLLLAEFNSAVNPIIYSYRDKEMSGTF 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
60-194 2.17e-04

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 42.87  E-value: 2.17e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnelmAYWyFGQVWCGVYLALDVLFC--TS 137
Cdd:cd15222   9 LLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLG----IFW-FNAREISFDACLAQMFFihTF 83
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   138 SIVH---LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP 194
Cdd:cd15222  84 SFMEssvLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLP 143
7tmA_CysLTR1 cd15158
cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G ...
60-249 2.26e-04

cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cysteinyl leukotrienes (LTC4, LTD4, and LTE4) are the most potent inflammatory lipid mediators that play an important role in human asthma. They are synthesized in the leucocytes (cells of immune system) from arachidonic acid by the actions of 5-lipoxygenase and induce bronchial constriction through G protein-coupled receptors, CysLTR1 and CysLTR2. Activation of CysLTR1 by LTD4 induces airway smooth muscle contraction and proliferation, eosinophil migration, and damage to the lung tissue. They belong to the class A GPCR superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320286 [Multi-domain]  Cd Length: 285  Bit Score: 42.81  E-value: 2.26e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFSLANEL-MAYWYFGQVWCGV-YLALDV-LFC 135
Cdd:cd15158   9 VITVFGLVGNGFALYVLIKTYRQKSAFHIYMLNLAVSDLLcVCTL--PLRVVYYVhKGQWLFGDFLCRIsSYALYVnLYC 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 tsSIVHLCAISLDRYWSVTQAVEyNLKR-TPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAY-----PQCGLNDETW 209
Cdd:cd15158  87 --SIYFMTAMSFTRFLAIVFPVQ-NLNLvTVKKARIVCVGIWIFVTLTSSPFLMSGSHDTETNKTkcfepPQSNQQLTKL 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 178194   210 YILS--SCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRA 249
Cdd:cd15158 164 LVLNyiSLVVGFIIPFLVILICYAMIIRTLLKNTMKARKQQS 205
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
61-233 2.28e-04

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 42.70  E-value: 2.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV 140
Cdd:cd15420  10 LYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   141 HLCAISLDRYWSVTQAVEYNLKRTpRRVKATIVAV-WLISAVISFPPLVSLYRqpdgaaYPQCGLND------------- 206
Cdd:cd15420  90 LLAVMSYDRYVAICHPLRYTVIMN-WRVCTTLAATsWACGFLLALVHVVLLLR------LPFCGPNEvnhffceilavlk 162
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   207 ----ETW----YILSSCIGSFFAPCLIMGLVYARI 233
Cdd:cd15420 163 lacaDTWineiLIFAGCVFILLGPFSLILISYLHI 197
7tmA_P2Y11 cd15376
P2Y purinoceptor 11, member of the class A family of seven-transmembrane G protein-coupled ...
63-187 2.62e-04

P2Y purinoceptor 11, member of the class A family of seven-transmembrane G protein-coupled receptors; P2Y11 belongs to the P2Y receptor family of purinergic G-protein coupled receptors. The activation of P2Y11 is a major pathway of macrophage activation that leads to the release of cytokines. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320498 [Multi-domain]  Cd Length: 284  Bit Score: 42.76  E-value: 2.62e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLT-SRALRAPQNLFLVSLASADILVAtLVMPFslaneLMAY------WYFGQVWCGvyLALDVLFC 135
Cdd:cd15376  12 LVAVLGNGLALWLFVTrERRPWHTGVVFSFNLAVSDLLYA-LSLPL-----LAAYyyppknWRFGEAACK--LERFLFTC 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 178194   136 T--SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL 187
Cdd:cd15376  84 NlyGSIFFITCISLNRYLGIVHPFFTRSHVRPKHAKLVSLAVWLLVAALSAPVL 137
7tmA_LPAR3_Edg7 cd15343
lysophosphatidic acid receptor subtype 3 (LPAR3 or LPA3), also called endothelial ...
60-245 3.03e-04

lysophosphatidic acid receptor subtype 3 (LPAR3 or LPA3), also called endothelial differentiation gene 7 (Edg7), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320465 [Multi-domain]  Cd Length: 274  Bit Score: 42.56  E-value: 3.03e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL--VATLVMPFS---LANEL-MAYWYFGQVWCGVYLaldvl 133
Cdd:cd15343   9 FCCLFIFVSNSLVIAAVVKNKRFHYPFYYLLANLAAADFFagIAYVFLMFNtgpVSKTLtVNRWFLRQGLLDTSL----- 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   134 fcTSSIVHLCAISLDRYWSVTQ-AVEYNLkrTPRRVKATIVAVWLISAVIsfpplvslyrqpdgAAYPQCGLNDETWYIL 212
Cdd:cd15343  84 --SASLTNLLVIAVERHISIMRmKVHSNL--TKRRVTLLIALVWAIAIFM--------------GAVPTLGWNCICNISA 145
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 178194   213 SSCIGSFFAPC-------------LIMGLVYARIYRVAKRRTRTLS 245
Cdd:cd15343 146 CSSLAPIYSRSylvfwsvsnlvvfLIMVVVYLRIYVYVQRKTNVLS 191
7tmA_FPR-like cd15117
N-formyl peptide receptors, member of the class A family of seven-transmembrane G ...
374-447 3.10e-04

N-formyl peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The formyl peptide receptors (FPRs) are chemoattractant GPCRs that involved in mediating immune responses to infection. They are expressed at elevated levels on polymorphonuclear and mononuclear phagocytes. FPRs bind N-formyl peptides, which are derived from the mitochondrial proteins of ruptured host cells or invading pathogens. Activation of FPRs by N-formyl peptides such as N-formyl-Met-Leu-Phe (FMLP) triggers a signaling cascade that stimulates neutrophil accumulation, phagocytosis and superoxide production. These responses are mediated through a pertussis toxin-sensitive G(i) protein that activates a PLC-IP3-calcium signaling pathway. While FPRs are involved in host defense responses to bacterial infection, they can also suppress the immune system under certain conditions. Yet, the physiological role of the FPR family is not fully understood.


Pssm-ID: 320245 [Multi-domain]  Cd Length: 288  Bit Score: 42.41  E-value: 3.10e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   374 AREKRFTFVLAVVMGVFVLCWFPFFfIYSLYGICREACQVPGpLFKFFFWI-------GYCNSSLNPVIYTVFNQDFRPS 446
Cdd:cd15117 210 VHSSRPFRVLTAVVAAFFLCWFPFH-LVSLLELVVILNQKED-LNPLLILLlplssslACVNSCLNPLLYVFVGRDFRER 287

                .
gi 178194   447 F 447
Cdd:cd15117 288 L 288
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
60-183 3.18e-04

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 42.22  E-value: 3.18e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANEL-----------MAYWYFgqvwCGV 126
Cdd:cd15918   7 FLGMYlvTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQtqsksisyagcLTQMYF----FLL 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   127 YLALDVLFctssivhLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVIS 183
Cdd:cd15918  83 FGDLDNFL-------LAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHS 132
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
60-194 3.36e-04

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 42.47  E-value: 3.36e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIV--FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd13954   7 FLLIylLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGT 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQP 194
Cdd:cd13954  87 ECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLP 143
7tmA_LPAR2_Edg4 cd15342
lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial ...
63-246 3.90e-04

lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial differentiation gene 4 (Edg4), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320464 [Multi-domain]  Cd Length: 274  Bit Score: 42.09  E-value: 3.90e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL--VATLVMPFSLA---NELMAY-WYFGQVWCGVYLaldvlfcT 136
Cdd:cd15342  12 VIVLLTNLLVIAAIFINRRFHYPIYYLLGNLAAADLFagVAYLFLMFHTGpwtAKLSLYqWFLRQGLLDTSL-------T 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   137 SSIVHLCAISLDRYWSVTqAVEYNLKRTPRRVKATIVAVWLISAVISFPP------LVSLYRQPDGAayPQCGLNDETWY 210
Cdd:cd15342  85 ASVANLLAIAVERHQTIF-TMQLHSKMSNQRVVILIFGIWMVALILGLIPamgwncLCDLKRCSTMA--PLYSRSYLVFW 161
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 178194   211 ILSSCIgSFfapcLIMGLVYARIYRVAKRRTRTLSE 246
Cdd:cd15342 162 ALSNLL-TF----LIMVAVYTRIFIYVRRKSQRMSE 192
7tmA_OXER1 cd15200
oxoeicosanoid receptor 1, member of the class A family of seven-transmembrane G ...
62-155 3.91e-04

oxoeicosanoid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; OXER1, also called GPR170, is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid. OXER1 is a member of the class A family of seven-transmembrane G-protein coupled receptors and appears to be coupled to the G(i/o) protein. The receptor is expressed in various tissues except brain. Phylogenetic analysis showed that GPR31 and OXER1 are the most closely related receptors to the hydroxycarboxylic acid receptor family (HCARs). OXER1, like GPR31, activates the ERK1/2 (MAPK3/MAPK1) pathway of intracellular signaling, but unlike GPR31, does cause increase in the cytosolic calcium level.


Pssm-ID: 320328 [Multi-domain]  Cd Length: 276  Bit Score: 42.06  E-value: 3.91e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVAT---LVMPFSLANELmayWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15200  11 FVLGLVGNGIALFIFCFHRRPWKSNTMYLLSLVVADFFLIInlpFRIDYYLRNEV---WRFGATACQVNLFMLSMNRTAS 87
                        90
                ....*....|....*..
gi 178194   139 IVHLCAISLDRYWSVTQ 155
Cdd:cd15200  88 IVFLTAIALNRYLKVVH 104
7tmA_GPR82 cd14996
orphan G protein-coupled receptor 82, member of the class A family of seven-transmembrane G ...
60-202 4.48e-04

orphan G protein-coupled receptor 82, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the G-protein coupled receptor 82 of unknown function. GPR82 is a member of the rhodopsin-like, class A GPCRs, which is a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320127 [Multi-domain]  Cd Length: 305  Bit Score: 42.10  E-value: 4.48e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATlVMPFSLANELMA-YWYFGQVWCGVY-----LALDVL 133
Cdd:cd14996   9 FLFVTGVFGNLLSLWVFLTKISKKTSTHIYLINLVTANLLVCS-AMPFQAAYFLKGfYWKYQSTQCRIAnffgtLVIHVS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   134 FCTsSIVHLCAISLDRYWSV------TQAVEYNLK----------RTPRRVKATIVAVWLISAVISFpPLVSLY--RQPD 195
Cdd:cd14996  88 MCV-SILILSWIAISRYATLmkhdsaTQKQSCYEKifyghflkrfRQPKFARYLCIYIWGVVLCIII-PVVVYYsvREAD 165

                ....*..
gi 178194   196 GAAYPQC 202
Cdd:cd14996 166 EDGESLC 172
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
60-183 6.46e-04

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 41.58  E-value: 6.46e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15406  16 FLGIYvvTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIA 95
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRrvkatiVAVWLISAVIS 183
Cdd:cd15406  96 ECYMLTAMAYDRYVAICNPLLYNVTMSPR------VCSLLVAGVYI 135
7tmA_Apelin_R cd15190
apelin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
373-444 7.42e-04

apelin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Apelin (APJ) receptor is a G protein-coupled receptor that binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake.


Pssm-ID: 341340 [Multi-domain]  Cd Length: 304  Bit Score: 41.29  E-value: 7.42e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   373 QAREKRFTFVLAVVMGVFVLCWFPFFFIYSLY-----GICREACQVPGPLFKFFFW---IGYCNSSLNPVIYTVFNQDFR 444
Cdd:cd15190 222 DKKKRRLLKIIITLVVTFALCWLPFHLVKTLYalmylGILPFSCGFDLFLMNAHPYatcLAYVNSCLNPFLYAFFDPRFR 301
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
60-188 7.86e-04

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 41.39  E-value: 7.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPfslanELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15956   9 FIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAP-----KLLAILWFGATAISSYVCLSQMFLVHAF 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 178194   140 VH-----LCAISLDRYWSVTQAVEYNLKRTPRRVK--ATIVAVWLISAVISFPPLV 188
Cdd:cd15956  84 SAmesgvLVAMALDRFVAICNPLHYATILTLEVVAkaGLLLALRGVAIVIPFPLLV 139
7tmA_SUCNR1_GPR91 cd15378
succinate receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
63-246 7.93e-04

succinate receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Succinate receptor (SUCNR1) GPR91 exclusively couples to G(i) protein to inhibit cAMP production and also activates PLC-beta to increase intracellular calcium concentrations in an inositol phosphate dependent mechanism. Succinate, an intermediate molecule of the citric cycle, is shown to cause cardiac hypertrophy via GPR91 activation. Furthermore, succinate-induced GPR91 activation is involved in the regulation of renin-angiotensin system and is suggested to play an important role in the development of renovascular hypertension and diabetic nephropathy. SUCNR1 belongs to the class A GPCR superfamily and is phylogenetically related to the purinergic P2Y1-like receptor subfamily, whose members are coupled to G(q) protein to activate phospholipase C (PLC).


Pssm-ID: 320500 [Multi-domain]  Cd Length: 283  Bit Score: 41.24  E-value: 7.93e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASAD-ILVATLVM-PFSLANELmayWYFGQVWCGV--YLALDVLFctSS 138
Cdd:cd15378  12 VLGFIGNTIVILGYIFCLKNWKSSNIYLFNLSVSDlAFLCTLPMlVYSYSNGQ---WLFGDFLCKSnrYLLHANLY--SS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLIsAVISFPPLVSLYRQPDGAAYPQC-------GLNDETWYI 211
Cdd:cd15378  87 ILFLTFISIDRYLLIKYPFREHILQKKRSAVAISLAIWVL-VTLELLPILTFIGPNLKDNVTKCkdyassgDATNSLIYS 165
                       170       180       190
                ....*....|....*....|....*....|....*
gi 178194   212 LSSCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSE 246
Cdd:cd15378 166 LFLTVTGFLIPLCVMCFFYYKIALFLKNRNRQLAN 200
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
60-185 7.96e-04

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 41.12  E-value: 7.96e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTV--VGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANelmaYWY----------FGQVWCgVY 127
Cdd:cd15223   7 FLLLYLValVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAI----FWFdantislpgcFAQMFF-IH 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   128 LaldvLFCTSSIVHLCaISLDRYWSVTQAVEYNLKRTPRRV-KATIVAVwLISAVISFP 185
Cdd:cd15223  82 F----FTAMESSILLV-MALDRYVAICKPLRYPSIITKSFIlKLVLFAL-IRSGLLVLP 134
7tmA_VA_opsin cd15082
non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane ...
69-228 9.39e-04

non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The vertebrate ancient (VA) opsin photopigments were originally identified in salmon and they appear to have diverged early in the evolution of vertebrate opsins. VA opsins are localized in the inner retina and the brain in teleosts. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extraretinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity, and body color change. The VA opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320210 [Multi-domain]  Cd Length: 291  Bit Score: 40.94  E-value: 9.39e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    69 NVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGqVWCGVYLALDV-LFCTSSIVHLCAISL 147
Cdd:cd15082  31 NFAVMLVTFRFKQLRQPLNYIIVNLSVADFLVSLTGGTISFLTNARGYFFLG-VWACVLEGFAVtFFGIVALWSLAVLAF 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEyNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNdetWYILS----SCIGSFFAPC 223
Cdd:cd15082 110 ERFFVICRPLG-NIRLQGKHAALGLLFVWTFSFIWTIPPVLGWSSYTVSKIGTTCEPN---WYSGNmhdhTYIITFFTTC 185

                ....*
gi 178194   224 LIMGL 228
Cdd:cd15082 186 FILPL 190
7tmA_AT2R cd15191
type 2 angiotensin II receptor, member of the class A family of seven-transmembrane G ...
373-447 1.03e-03

type 2 angiotensin II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2R, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Moreover, AT1R promotes cell proliferation, whereas AT2R inhibits proliferation and stimulates cell differentiation. The AT2R is highly expressed during fetal development, however it is scarcely present in adult tissues and is induced in pathological conditions. Generally, the AT1R mediates many actions of Ang II, while the AT2R is involved in the regulation of blood pressure and renal function.


Pssm-ID: 341341 [Multi-domain]  Cd Length: 285  Bit Score: 40.89  E-value: 1.03e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   373 QAREKRFTFVLAVVMGvFVLCWFPFFFIYSLYGICRE----ACQVPG---PLFKFFFWIGYCNSSLNPVIYTVFNQDFRP 445
Cdd:cd15191 205 QRRDKVLKMVAAVVLA-FLICWFPFHVLTFLDALARMgvinNCWVITvidKALPFAICLGFSNSCINPFLYCFVGNHFRE 283

                ..
gi 178194   446 SF 447
Cdd:cd15191 284 KL 285
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
60-184 1.28e-03

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 40.38  E-value: 1.28e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLI--VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15413   7 FLViyLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIIS 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15413  87 ELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVAL 133
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
60-106 1.29e-03

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 40.66  E-value: 1.29e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*....
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMP 106
Cdd:cd15939   7 FLLIYlaTVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAP 55
7tmA_P2Y14 cd15149
P2Y purinoceptor 14, member of the class A family of seven-transmembrane G protein-coupled ...
88-235 1.37e-03

P2Y purinoceptor 14, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y14 receptor is activated by UDP-sugars and belongs to the G(i) class of the P2Y family of purinergic G-protein coupled receptors. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-sugars. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5 and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12 and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-sugars (P2Y14). P2Y14 receptor has been reported to be involved in a diverse set of physiological responses in many epithelia as well as in immune and inflammatory cells.


Pssm-ID: 320277 [Multi-domain]  Cd Length: 284  Bit Score: 40.60  E-value: 1.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    88 LFLVSLASADiLVATLVMPFS-LANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPR 166
Cdd:cd15149  36 VYLKNIVFAD-LLMSLTFPFKiLSDVELGPWQLNVIVCRYSAVIFYLNMYVGIIFFGLIGFDRYYKIVKPLHTSFVQNVG 114
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   167 RVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQC-GLNDE---TWYILSS--CIGSFFAPCLIMGLVYARIYR 235
Cdd:cd15149 115 YSKALSVVVWMLMAVLSVPNIILTNQSFHEANYTKCaRLKSElgiQWHKASNyiCVSIFWVVFLLLIIFYVAISR 189
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
60-159 1.45e-03

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 40.33  E-value: 1.45e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIV--FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15231   7 FLIIylVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGT 86
                        90       100
                ....*....|....*....|..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEY 159
Cdd:cd15231  87 ECLLLAVMAYDRYVAICNPLHY 108
7tmA_LPAR5 cd15154
lysophosphatidic acid receptor 5, member of the class A family of seven-transmembrane G ...
62-185 1.69e-03

lysophosphatidic acid receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; Lysophosphatidic acid receptor 5 (LPAR5) is a G protein-coupled receptor that binds the bioactive lipid lysophosphatidic acid (LPA) and is involved in maintenance of human hair growth. Phylogenetic analysis of the class A GPCRs shows that LAPR5 is classified into the cluster consisting receptors that are preferentially activated by adenosine and uridine nucleotides. Although LPA6 (P2Y5) is expressed in human hair follicle cells, LPA4 and LPA5 are not. These three receptors are highly homologous and mediate an increase in intracellular cAMP production. Activation of LPAR5 is coupled to G(q) and G(12/13) proteins.


Pssm-ID: 320282 [Multi-domain]  Cd Length: 285  Bit Score: 40.13  E-value: 1.69e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    62 IVFTVVGNVLVVIAV-LTSRALRAPQ--NLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSS 138
Cdd:cd15154   8 SLLFPVGLLLNAVALwVFVRYLRLHSvvSIYMCNLALSDLLF-TLSLPLRIYYYANHYWPFGNFLCQFSGSIFQMNMYGS 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   139 IVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15154  87 CLFLMCINVDRYLAIVHPLRFRHLRRPKVARLLCLAVWALILGGSVP 133
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
65-177 1.86e-03

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 40.16  E-value: 1.86e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    65 TVVGN-VLVVIAVLTSRaLRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLC 143
Cdd:cd15433  14 TLVGNtIIILLSVRDLR-LHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLLA 92
                        90       100       110
                ....*....|....*....|....*....|....
gi 178194   144 AISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWL 177
Cdd:cd15433  93 VMAFDRYAAVCRPLHYAALMSPRLCQTLASISWL 126
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
60-166 2.02e-03

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 39.77  E-value: 2.02e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15428   7 FLIIYlmTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGIT 86
                        90       100
                ....*....|....*....|....*....
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPR 166
Cdd:cd15428  87 ECALLSVMSYDRYVAICLPLRYSLIMTWK 115
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
63-193 2.03e-03

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 40.02  E-value: 2.03e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15951  12 AVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTMESGIF 91
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPRRVkATIVAVWLISAVISFPPLVSLYRQ 193
Cdd:cd15951  92 VAMALDRYVAICNPLRHSTILTNSVV-AKIGLAVVLRGGILVSPHPFLLRR 141
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
63-166 2.07e-03

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 40.08  E-value: 2.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHL 142
Cdd:cd15409  12 LITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFLL 91
                        90       100
                ....*....|....*....|....
gi 178194   143 CAISLDRYWSVTQAVEYNLKRTPR 166
Cdd:cd15409  92 AAMAYDRYVAICNPLLYPVVMSNR 115
7tmA_S1PR1_Edg1 cd15346
sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial ...
60-257 2.29e-03

sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320468 [Multi-domain]  Cd Length: 277  Bit Score: 39.86  E-value: 2.29e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIV--FTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY------WYFGQvwCGVYLALd 131
Cdd:cd15346   7 FIIIccFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYkltptqWFLRE--GSMFVAL- 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   132 vlfcTSSIVHLCAISLDRYWSVTQAVEYNLKRTpRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWYI 211
Cdd:cd15346  84 ----SASVFSLLAIAIERYITMLKMKLHNGSNS-FRSFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYI 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 178194   212 LSsCIGSFFAPCLIMGLVYARIYRVAKRRTRTLSEKRAPVGPDGAS 257
Cdd:cd15346 159 LF-CTTVFTLLLLSIVILYCRIYSLVRTRSRRLTFRKNIRKASRSS 203
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
60-184 2.44e-03

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 39.62  E-value: 2.44e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15936   7 FLLVYltTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGA 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15936  87 EVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSI 133
7tmA_C5aR cd15114
complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of ...
372-447 2.48e-03

complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320242 [Multi-domain]  Cd Length: 274  Bit Score: 39.69  E-value: 2.48e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   372 AQAREKRFTFVLAVVMGVFvLCWFPfffiYSLYGICREACQVPGPLFK-------FFFWIGYCNSSLNPVIYTVFNQDFR 444
Cdd:cd15114 197 RQKSRRTLKVVTAVVVGFF-LCWTP----YHVVGLIIAASAPNSRLLAnalkadpLTVSLAYINSCLNPIIYVVAGRGFR 271

                ...
gi 178194   445 PSF 447
Cdd:cd15114 272 KSL 274
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
383-447 3.73e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 38.99  E-value: 3.73e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 178194   383 LAVVMGVFVLCWFPFFFIYSLYGICREA--CQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15350 204 LTILLGVFVCCWAPFVLHLLLMMFCPMNpyCACYRSLFQVNGTLIMSHAVIDPAIYAFRSPELRNTF 270
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
61-257 3.74e-03

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 39.03  E-value: 3.74e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    61 LIVF-TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSI 139
Cdd:cd15387   9 LILFlALTGNICVLLAIHTTRHKHSRMYFFMKHLSIADLVVAVFQVLPQLIWDITFRFYGPDFLCRLVKYLQVVGMFAST 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   140 VHLCAISLDRYWSVTQAVEYNLKRTPRrvkATIVAVWLISAVISFPPL-VSLYRQPDGAAYPQCGLNDETW----YILSS 214
Cdd:cd15387  89 YMLLLMSIDRCLAICQPLRSLHRRSDR---VYVLFSWLLSLVFSIPQVhIFSLREVGNGVYDCWADFIQPWgpkaYITWI 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 178194   215 CIGSFFAPCLIM----GLVYARIYRVAKRRTRTLSEKRAPVGPDGAS 257
Cdd:cd15387 166 TLSVYIIPVLILsvcyGLISFKIWQNVKLKTRRETKTPLSSAASGGA 212
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
60-110 3.77e-03

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 38.95  E-value: 3.77e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLA 110
Cdd:cd15942   7 FLVVYllTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIA 59
7tmA_TSH-R cd15964
thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family ...
60-190 3.88e-03

thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. TSH-R plays an important role thyroid physiology, and its activation stimulates the production of thyroxine (T4) and triiodothyronine (T3). Defects in TSH-R are a cause of several types of hyperthyroidism. The receptor is predominantly found on the surface of the thyroid epithelial cells and couples to the G(s)-protein and activates adenylate cyclase, thereby promoting cAMP production. TSH and cAMP stimulate thyroid cell proliferation, differentiation, and function.


Pssm-ID: 320630 [Multi-domain]  Cd Length: 275  Bit Score: 39.12  E-value: 3.88e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQV--W-----CGVYLALDV 132
Cdd:cd15964   9 FVNLLAILGNVFVLLILLTSHYKLTVPRFLMCNLAFADFCMGIYLLLIASVDLHTRSEYYNHAidWqtgpgCNTAGFFTV 88
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd15964  89 FASELSVYTLTVITLERWYAITFAMRLDRKIRLRHASAIMLGGWVFCFLLALLPLVGV 146
7tmA_P2Y12-like cd15924
P2Y purinoceptors 12, 13, 14, and similar proteins, member of the class A family of ...
88-248 3.95e-03

P2Y purinoceptors 12, 13, 14, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5 and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12 and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y12-like receptors as well as closely related orphan receptor, GPR87.


Pssm-ID: 341352 [Multi-domain]  Cd Length: 284  Bit Score: 38.97  E-value: 3.95e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    88 LFLVSLASADILVaTLVMPFSLANEL-MAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPR 166
Cdd:cd15924  36 IYLKNTVVADLLM-ILTFPFKILSDAgLGPWQLRTFVCRVTSVLFYFTMYTSIVFLGLISIDRYLKIVRPFKTSFPKSVS 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   167 RVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCG-LNDE---TWYILSS--CIGSFFAPCLIMGLVYA----RIYRV 236
Cdd:cd15924 115 FAKILSVVVWALMFLLSLPNMILTNQQPREKNVKKCSfLKSElglKWHEIVNyiCQVIFWIVFLLMIVCYTaitkKVYRS 194
                       170
                ....*....|..
gi 178194   237 AKRRTRTLSEKR 248
Cdd:cd15924 195 YRRVFRSSSSRR 206
7tmA_Mrgpr cd14973
mas-related G protein-coupled receptors, member of the class A family of seven-transmembrane G ...
60-243 4.08e-03

mas-related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The Mas-related G-protein coupled receptor (Mrgpr) family constitutes a group of orphan receptors exclusively expressed in nociceptive primary sensory neurons and mast cells in the skin. Members of the Mrgpr family have been implicated in the modulation of nociception, pruritus (itching), and mast cell degranulation. The Mrgpr family in rodents and humans contains more than 50 members that can be grouped into 9 distinct subfamilies: MrgprA, B, C (MrgprX1), D, E, F, G, H (GPR90), and the primate-specific MrgprX subfamily. Some Mrgprs can be activated by endogenous ligands such as beta-alanine, adenine (a cell metabolite and potential transmitter), RF-amide related peptides, or salusin-beta (a bioactive peptide). However, the effects of these agonists are not clearly understood, and the physiological role of the individual receptor family members remains to be determined. Also included in this family is Mas-related G-protein coupled receptor 1-like (MAS1L) which is only found in primates. The angiotensin-II metabolite angiotensin is an endogenous ligand for MAS1L.


Pssm-ID: 320104 [Multi-domain]  Cd Length: 272  Bit Score: 39.16  E-value: 4.08e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFT----VVGNVLVvIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVwCGVYLALDVLFC 135
Cdd:cd14973   5 SLTVLLslcgLVGNGLV-LWLLGFRIKRNPFSVYILNLAAADFLFLSCQAIQSLEDLLGGSLPGFAL-CRLLATLMFFSY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 TSSIVHLCAISLDRYWSVTQAVEYNLKRtPRRVKATIVA-VWLISAVISFPPLVSLYRQPDGAAYPQCglndETWYILss 214
Cdd:cd14973  83 TVGLSLLAAISTERCLSVLFPIWYRCHR-PKHLSAVVCAlLWALSLLLSVLESYFCGFLFWKFNESAC----RTFNFL-- 155
                       170       180       190
                ....*....|....*....|....*....|...
gi 178194   215 CIGSFFAPCLIMGL----VYARIYRVAKRRTRT 243
Cdd:cd14973 156 SALLFLLLFLVMCVssltLLIRVQCSSQRRPPT 188
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
60-111 4.24e-03

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 38.98  E-value: 4.24e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAN 111
Cdd:cd15225   7 FLLIYlvTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVN 60
7tmA_PD2R2_CRTH2 cd15118
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
63-185 4.61e-03

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor, also known as CRTH2, is a chemoattractant G-protein coupled receptor expressed on T helper type 2 cells that binds prostaglandin D2 (PGD2). PGD2 functions as a mast cell-derived mediator to trigger asthmatic responses and also causes vasodilation. PGD2 exerts its inflammatory effects by binding to two G-protein coupled receptors, the D-type prostanoid receptor (DP) and PD2R2 (CRTH2). PD2R2 couples to the G protein G(i/o) type which leads to a reduction in intracellular cAMP levels and an increase in intracellular calcium. PD2R2 is involved in mediating chemotaxis of Th2 cells, eosinophils, and basophils generated during allergic inflammatory processes. CRTH2 (PD2R2), but not DP receptor, undergoes agonist-induced internalization which is one of key processes that regulates the signaling of the GPCR.


Pssm-ID: 320246 [Multi-domain]  Cd Length: 284  Bit Score: 39.02  E-value: 4.61e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVvIAVLTSRALRAPQNLFLVSLASADILvATLVMP-FSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15118  12 TLGIVENLLI-LWVVGFRLRRTVISIWILNLALSDLL-ATLSLPfFTYYLASGHTWELGTTFCRIHSSIFFLNMFVSGFL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15118  90 LAAISLDRCLLVVKPVWAQNHRNVAAAKKICGVIWAMALINTIP 133
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
60-185 5.14e-03

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 38.80  E-value: 5.14e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLI--VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANEL-----------MAYWYFgqvwcgv 126
Cdd:cd15224   7 FLIayVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLsqnksisfvgcMTQLYF------- 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 178194   127 YLAldvLFCTSSIVhLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFP 185
Cdd:cd15224  80 FLS---LACTECVL-LAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMI 134
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
60-203 6.32e-03

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 38.51  E-value: 6.32e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANelmaYW-------YFGqvwCGVYLALDV 132
Cdd:cd15434   9 IFYLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVN----LWgpdktisYVG---CAIQLFIAL 81
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLI---SAVISFPPLVSLyrqpdgaayPQCG 203
Cdd:cd15434  82 GLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIgfgNSLVLSPLTLSL---------PRCG 146
7tmA_LTB4R cd14975
leukotriene B4 receptors, member of the class A family of seven-transmembrane G ...
68-241 6.75e-03

leukotriene B4 receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the G(q)-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320106 [Multi-domain]  Cd Length: 278  Bit Score: 38.23  E-value: 6.75e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    68 GNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISL 147
Cdd:cd14975  17 GNSFVIWSILIKVKQRSVTMLLVLNLALADLAV-LLTLPVWIYFLATGTWDFGLAACKGCVYVCAVSMYASVFLITLMSL 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   148 DRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVslYRQPDGAA-YPQCGLND-----ETWYILSSCIGSFFA 221
Cdd:cd14975  96 ERFLAVSRPFVSQGWRAKALAHKVLAIIWLLAVLLATPVIA--FRHVEETVeNGMCKYRHysdgqLVFHLLLETVVGFAV 173
                       170       180
                ....*....|....*....|
gi 178194   222 PCLIMGLVYARIYRVAKRRT 241
Cdd:cd14975 174 PFTAVVLCYSCLLRRLRRRR 193
7tmA_GPR34-like cd15148
putative G protein-coupled receptor 34, member of the class A family of seven-transmembrane G ...
63-190 7.24e-03

putative G protein-coupled receptor 34, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the G-protein coupled receptor 34 of unknown function. Orphan GPR34 is a member of the rhodopsin-like, class A GPCRs, which is a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320276 [Multi-domain]  Cd Length: 282  Bit Score: 38.14  E-value: 7.24e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVaTLVMPFSLANELMA-YWYFGQVWCGVYLALDVLFCTSSIVH 141
Cdd:cd15148  12 LFGLVGNLLALWVFLFIHRKRNSVRIFLINVAIADLLL-IICLPFRILYHVNNnQWTLGPLLCKVVGNLFYMNMYISIIL 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 178194   142 LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLIsAVISFPPLVSL 190
Cdd:cd15148  91 LGFISLDRYLKINRSSRRQKFLTRKWSIVACGVLWAV-ALVGFVPMIVL 138
7tmA_CysLTR cd15921
cysteinyl leukotriene receptors, member of the class A family of seven-transmembrane G ...
60-196 7.53e-03

cysteinyl leukotriene receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cysteinyl leukotrienes (LTC4, LTD4, and LTE4) are the most potent inflammatory lipid mediators that play an important role in human asthma. They are synthesized in the leucocytes (cells of immune system) from arachidonic acid by the actions of 5-lipoxygenase and induce bronchial constriction through G protein-coupled receptors, CysLTR1 and CysLTR2. Activation of CysLTR1 by LTD4 induces airway smooth muscle contraction and proliferation, eosinophil migration, and damage to the lung tissue. They belong to the class A GPCR superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320587 [Multi-domain]  Cd Length: 283  Bit Score: 38.25  E-value: 7.53e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFT--VVGNVLVVIAVLTSRALRAPQNLFLVSLASADIL-VATLvmPFSLANELM-AYWYFGQVWCGVYLALDVLFC 135
Cdd:cd15921   7 YILIFIlgLTGNSISVYVFLSQYRSQTPVSVLMVNLAISDLLlVCTL--PLRLTYYVLnSHWPFGDIACRIILYVLYVNM 84
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194   136 TSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDG 196
Cdd:cd15921  85 YSSIYFLTALSVFRYLALVWPYLYLRVQTHSVAGIICGLIWILMGLASSPLLFAKSKQHDE 145
7tmA_CB1 cd15340
cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G ...
373-447 7.82e-03

cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320462 [Multi-domain]  Cd Length: 292  Bit Score: 38.35  E-value: 7.82e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   373 QAR-EKRFTFVLAVVMGVFVLCWFPFFFI--YSLYGICREACQVpgpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15340 218 QTRmDIRLAKTLVLILVVLIICWGPLLAImvYDVFGKMNKLIKT---VFAFCSMLCLLNSTVNPIIYALRSKDLRHAF 292
7tmA_GPR139 cd15919
G-protein-coupled receptor GPR139, member of the class A family of seven-transmembrane G ...
60-241 8.78e-03

G-protein-coupled receptor GPR139, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR139, a vertebrate orphan receptor, is very closely related to GPR142, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and plays an important role in mediating insulin secretion and maintaining glucose homeostasis, whereas GPR139 is expressed almost exclusively in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139. These orphan receptors are phylogenetically clustered with invertebrate FMRFamide receptors such as Drosophila melanogaster DrmFMRFa-R.


Pssm-ID: 320585 [Multi-domain]  Cd Length: 270  Bit Score: 37.95  E-value: 8.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAV--LTSRALRAPQNlFLVSLASADILVATLV--MPFSLANELMAYwYFGQVWCGVYLALDVLFC 135
Cdd:cd15919   9 LLLCLGLPANILTVIILsqLVARRQKSSYN-YLLALAAADILVLFFIvfVDFLLEDFILNK-QMPQVLDKIIEVLEFSSI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194   136 TSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPplvsLYRQPDGAAYPQCGLNDETWYILSSC 215
Cdd:cd15919  87 HTSIWITVPLTIDRYIAVCHPLKYHTVSYPARTRKVIVSVYITCFLTSIP----YYWWPNIWIEDYTSTSMHHVLIWIHC 162
                       170       180
                ....*....|....*....|....*.
gi 178194   216 IGSFFAPCLIMGLVYARIYRVAKRRT 241
Cdd:cd15919 163 FTVYLVPCSIFFVLNSIIVYKLRRKS 188
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
60-177 8.97e-03

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 37.77  E-value: 8.97e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVF--TVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15429   7 FLVMYllTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGT 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWL 177
Cdd:cd15429  87 EFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWT 126
7tmA_FSH-R cd15360
follicle-stimulating hormone receptor, member of the class A family of seven-transmembrane G ...
60-190 9.26e-03

follicle-stimulating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. FSH-R functions in gonad development and is found in the ovary, testis, and uterus. Defects in this receptor cause ovarian dysgenesis type 1, and also ovarian hyperstimulation syndrome. The FSH-R activation couples to the G(s)-protein and stimulates adenylate cyclase, thereby promoting cAMP production.


Pssm-ID: 320482  Cd Length: 275  Bit Score: 37.92  E-value: 9.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQV--W-----CGVYLALDV 132
Cdd:cd15360   9 FINILAITGNIVVLAILLTSQYKLTVPRFLMCNLAFADLCMGIYLLLIASVDIRTKSQYYNYAidWqtgagCAAAGFFTV 88
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSL 190
Cdd:cd15360  89 FASELSVYTLTVITLERWHTITYAMQLDRKVRLRHAAVIMVGGWIFAFTVALLPIFGI 146
7tmA_LPAR1_Edg2 cd15344
lysophosphatidic acid receptor subtype 1 (LPAR1 or LPA1), also called endothelial ...
383-447 9.36e-03

lysophosphatidic acid receptor subtype 1 (LPAR1 or LPA1), also called endothelial differentiation gene 2 (Edg2), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341348 [Multi-domain]  Cd Length: 273  Bit Score: 37.70  E-value: 9.36e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 178194   383 LAVVMGVFVLCWFPFFFIYsLYGICREACQVPGpLFKFFFWIGYCNSSLNPVIYTVFNQDFRPSF 447
Cdd:cd15344 211 VVIVLGAFIICWTPGLVLL-LLDVCCPQCDVLA-YEKFFLLLAEFNSAMNPIIYSYRDKEMSATF 273
7tmA_V2R cd15388
vasopressin receptor 2, member of the class A family of seven-transmembrane G protein-coupled ...
371-439 9.37e-03

vasopressin receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The vasopressin type 2 receptor (V2R) is a G(s)-coupled receptor that controls balance of water and sodium ion by regulating their reabsorption in the renal collecting duct. Mutations of V2R is responsible for nephrogenic diabetes insipidus. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320510 [Multi-domain]  Cd Length: 295  Bit Score: 37.83  E-value: 9.37e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 178194   371 VAQAREK--RFTFVLAVVmgvFVLCWFPFFFIySLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVF 439
Cdd:cd15388 221 VSKAMIKtvKMTLVIVLV---YVLCWAPFFLV-QLWSVWDPKAPTEGATFTILMLLASLNSCTNPWIYMAF 287
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
60-184 9.39e-03

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 38.07  E-value: 9.39e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    60 FLI--VFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTS 137
Cdd:cd15411   7 FLViyVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATT 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 178194   138 SIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISF 184
Cdd:cd15411  87 ECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSL 133
7tmA_LPAR4 cd15155
lysophosphatidic acid receptor 4, member of the class A family of seven-transmembrane G ...
63-178 9.85e-03

lysophosphatidic acid receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; Lysophosphatidic acid receptor 4 (LPAR4) is a G protein-coupled receptor that binds and is activated by the bioactive lipid lysophosphatidic acid (LPA), which is released by activated platelets and constitutively found in serum. Phylogenetic analysis of the class A GPCRs shows that LAPR4 is classified into the cluster consisting receptors that are preferentially activated by adenosine and uridine nucleotides. Although LPA6 (P2Y5) is expressed in human hair follicle cells, LPA4 and LPA5 are not. These three receptors are highly homologous and mediate an increase in intracellular cAMP production. Activation of LPAR5 is coupled to G(12/13) proteins, leading to neurite retraction and stress fiber formation, whereas coupling to G(q) protein leads to increases in calcium levels.


Pssm-ID: 320283 [Multi-domain]  Cd Length: 283  Bit Score: 37.98  E-value: 9.85e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 178194    63 VFTVVGNVLVVIAVLTSRA----------LRAPQNLFLVSLASADiLVATLVMPFSLANELMAYWYFGQVWCGVYLALDV 132
Cdd:cd15155   2 LYGAVYSVVFILGLITNCAslfvfcfrmkMRNETAIFMTNLAVSD-LLFVFTLPFKIFYNFNRHWPFGDSLCKISGTAFL 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 178194   133 LFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLI 178
Cdd:cd15155  81 TNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWIL 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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