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Conserved domains on  [gi|20072167|gb|AAH26174|]
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EXOC4 protein [Homo sapiens]

Protein Classification

exocyst complex component 4( domain architecture ID 366393)

exocyst complex component 4 (EXOC4) is a component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane

Gene Ontology:  GO:0006887|GO:0006893|GO:0030165
TCDB:  1.F.2

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Sec8_exocyst super family cl23539
Sec8 exocyst complex component specific domain;
57-143 5.66e-14

Sec8 exocyst complex component specific domain;


The actual alignment was detected with superfamily member pfam04048:

Pssm-ID: 367782  Cd Length: 141  Bit Score: 68.85  E-value: 5.66e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20072167    57 DLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQ 136
Cdd:pfam04048  55 ALQEVVNEHHQGFNSSIGSYHQILSSIQDSQEDIRQLKQSLEESKKKLGTRSPELQELNQRSQKYKEMIEILDAIEELLS 134


                  ....*..
gi 20072167   137 VPQKLEQ 143
Cdd:pfam04048 135 VPDKIEQ 141
 
Name Accession Description Interval E-value
Sec8_exocyst pfam04048
Sec8 exocyst complex component specific domain;
57-143 5.66e-14

Sec8 exocyst complex component specific domain;


Pssm-ID: 367782  Cd Length: 141  Bit Score: 68.85  E-value: 5.66e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20072167    57 DLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQ 136
Cdd:pfam04048  55 ALQEVVNEHHQGFNSSIGSYHQILSSIQDSQEDIRQLKQSLEESKKKLGTRSPELQELNQRSQKYKEMIEILDAIEELLS 134


                  ....*..
gi 20072167   137 VPQKLEQ 143
Cdd:pfam04048 135 VPDKIEQ 141
 
Name Accession Description Interval E-value
Sec8_exocyst pfam04048
Sec8 exocyst complex component specific domain;
57-143 5.66e-14

Sec8 exocyst complex component specific domain;


Pssm-ID: 367782  Cd Length: 141  Bit Score: 68.85  E-value: 5.66e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20072167    57 DLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQ 136
Cdd:pfam04048  55 ALQEVVNEHHQGFNSSIGSYHQILSSIQDSQEDIRQLKQSLEESKKKLGTRSPELQELNQRSQKYKEMIEILDAIEELLS 134


                  ....*..
gi 20072167   137 VPQKLEQ 143
Cdd:pfam04048 135 VPDKIEQ 141
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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