|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-344 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 700.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00119 37 LLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNT 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00119 117 GVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00119 197 HLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00119 277 FAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLAS 356
|
330 340
....*....|....*....|....
gi 19908554 321 LSYFTIILILFPLTAALENKILKL 344
Cdd:MTH00119 357 ILYFTILLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-338 |
2.28e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 372.59 E-value: 2.28e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSY-----LNk 75
Cdd:COG1290 45 LALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 76 etWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVI 154
Cdd:COG1290 124 --WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 155 AGLTLVHLTFLHETGSNNPLGI----PSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNllGDPENFTPANPLSTP 230
Cdd:COG1290 202 LALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATP 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 231 PHIKPEWYFLFAYAILRSIP--NKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPV 308
Cdd:COG1290 280 AHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP 359
|
330 340 350
....*....|....*....|....*....|
gi 19908554 309 ehPFIIIGQLASLSYFTIILILFPLTAALE 338
Cdd:COG1290 360 --IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-171 |
1.94e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 248.82 E-value: 1.94e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLN--KETW 78
Cdd:cd00284 28 LLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKKprELTW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 79 NIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLT 158
Cdd:cd00284 108 VIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIV 187
|
170
....*....|...
gi 19908554 159 LVHLTFLHETGSN 171
Cdd:cd00284 188 ILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-169 |
1.49e-71 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 220.72 E-value: 1.49e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYG--SYLNKETW 78
Cdd:pfam00033 19 LLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTW 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 79 NIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLT 158
Cdd:pfam00033 99 VIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILM 178
|
170
....*....|.
gi 19908554 159 LVHLTFLHETG 169
Cdd:pfam00033 179 LLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
201-304 |
1.49e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 61.74 E-value: 1.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 201 LILLVSLALFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLMPLLHT-SKHRS 279
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQN 122
|
90 100
....*....|....*....|....*
gi 19908554 280 MTFRPLSQILFwalVANLLVLTWVG 304
Cdd:TIGR01156 123 PFRRPVATTVF---LFGTVVALWLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-344 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 700.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00119 37 LLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNT 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00119 117 GVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00119 197 HLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00119 277 FAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLAS 356
|
330 340
....*....|....*....|....
gi 19908554 321 LSYFTIILILFPLTAALENKILKL 344
Cdd:MTH00119 357 ILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-343 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 642.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00100 36 LLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNI 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00100 116 GIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMV 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00100 196 HLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00100 276 FAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLAS 355
|
330 340
....*....|....*....|...
gi 19908554 321 LSYFTIILILFPLTAALENKILK 343
Cdd:MTH00100 356 ILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-343 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 640.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00131 36 LLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNI 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00131 116 GVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATIL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00131 196 HLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00131 276 FAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVAS 355
|
330 340
....*....|....*....|...
gi 19908554 321 LSYFTIILILFPLTAALENKILK 343
Cdd:MTH00131 356 VLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-344 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 616.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00074 37 LLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00074 117 GVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASII 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00074 197 HLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00074 277 FAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAAS 356
|
330 340
....*....|....*....|....
gi 19908554 321 LSYFTIILILFPLTAALENKILKL 344
Cdd:MTH00074 357 ILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-333 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 592.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00191 33 LLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00191 113 GVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00191 193 HLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00191 273 FAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISS 352
|
330
....*....|...
gi 19908554 321 LSYFTIILILFPL 333
Cdd:MTH00191 353 FLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-331 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 581.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00156 26 LLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMS 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00156 106 GVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00156 186 HLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00156 266 FAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILT 345
|
330
....*....|.
gi 19908554 321 LSYFTIILILF 331
Cdd:MTH00156 346 ILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-342 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 572.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00145 37 LLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00145 117 GVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00145 197 HLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00145 277 FAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFT 356
|
330 340
....*....|....*....|..
gi 19908554 321 LSYFTIILILfPLTAALENKIL 342
Cdd:MTH00145 357 VLYFLFFLIL-PLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-342 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 570.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00034 36 LLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNI 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00034 116 GVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSII 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00034 196 HLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00034 276 FAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVAS 355
|
330 340
....*....|....*....|..
gi 19908554 321 LSYFTIILILFPLTAALENKIL 342
Cdd:MTH00034 356 VLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-343 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 535.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00016 37 LLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00016 117 GVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00016 197 HLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00016 277 WAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFT 356
|
330 340
....*....|....*....|...
gi 19908554 321 LSYFTiILILFPLTAALENKILK 343
Cdd:MTH00016 357 VFYFF-YFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-344 |
3.87e-173 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 485.75 E-value: 3.87e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00053 37 LLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00053 117 GVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALV 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00053 197 HLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00053 277 FAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIAS 356
|
330 340
....*....|....*....|....
gi 19908554 321 LSYFTIILILFPLTAALENKILKL 344
Cdd:MTH00053 357 IFYFAYFLILMPLAGYLENKLLKL 380
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-343 |
3.44e-172 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 483.43 E-value: 3.44e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00022 35 LLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNV 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00022 115 GVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIV 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00022 195 HLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00022 275 FAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLS 354
|
330 340
....*....|....*....|...
gi 19908554 321 LSYFTIILILFPLTAALENKILK 343
Cdd:MTH00022 355 FFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-343 |
4.61e-160 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 452.84 E-value: 4.61e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00224 37 LLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00224 117 GVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATIL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00224 197 HIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00224 277 WMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFT 356
|
330 340
....*....|....*....|...
gi 19908554 321 LSYFTiILILFPLTAALENKILK 343
Cdd:MTH00224 357 ILYFS-YFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-339 |
3.19e-129 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 374.66 E-value: 3.19e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00033 33 LLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00033 113 GVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLA 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFS--PNLLGDPENFTPANPLSTPPHIKPEWY 238
Cdd:MTH00033 193 HLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQPEWY 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 239 FLFAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPV-EHPFIIIGQ 317
Cdd:MTH00033 273 FLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGR 352
|
330 340
....*....|....*....|..
gi 19908554 318 LASLSYFTIILILFPLTAALEN 339
Cdd:MTH00033 353 IATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-338 |
2.28e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 372.59 E-value: 2.28e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSY-----LNk 75
Cdd:COG1290 45 LALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 76 etWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVI 154
Cdd:COG1290 124 --WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 155 AGLTLVHLTFLHETGSNNPLGI----PSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNllGDPENFTPANPLSTP 230
Cdd:COG1290 202 LALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATP 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 231 PHIKPEWYFLFAYAILRSIP--NKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPV 308
Cdd:COG1290 280 AHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP 359
|
330 340 350
....*....|....*....|....*....|
gi 19908554 309 ehPFIIIGQLASLSYFTIILILFPLTAALE 338
Cdd:COG1290 360 --IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-331 |
1.81e-113 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 333.44 E-value: 1.81e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00086 25 MLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWIS 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00086 105 GLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLF 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFaLMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFL 240
Cdd:MTH00086 185 HLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 241 FAYAILRSIPNKLGGVLALAASVLVLFLMPLLhtsKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLAS 320
Cdd:MTH00086 264 FAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFS 340
|
330
....*....|.
gi 19908554 321 LSYFTIILILF 331
Cdd:MTH00086 341 FIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-331 |
1.15e-88 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 270.32 E-value: 1.15e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKETWNI 80
Cdd:MTH00046 27 VLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 81 GVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLV 160
Cdd:MTH00046 107 GFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVV 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 161 HLTFLHETGSNNPLGIPSD-CDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYF 239
Cdd:MTH00046 187 HLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYF 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 240 LFAYAILRSIPNKLGGvLALAASVLVLFLMPllhtSKHRSMTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLA 319
Cdd:MTH00046 267 LAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLF 341
|
330
....*....|..
gi 19908554 320 SLSyftIILILF 331
Cdd:MTH00046 342 SVL---MVLLLF 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-171 |
1.94e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 248.82 E-value: 1.94e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLN--KETW 78
Cdd:cd00284 28 LLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKKprELTW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 79 NIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLT 158
Cdd:cd00284 108 VIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIV 187
|
170
....*....|...
gi 19908554 159 LVHLTFLHETGSN 171
Cdd:cd00284 188 ILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-169 |
1.49e-71 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 220.72 E-value: 1.49e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 1 LLGICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYG--SYLNKETW 78
Cdd:pfam00033 19 LLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTW 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 79 NIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLT 158
Cdd:pfam00033 99 VIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILM 178
|
170
....*....|.
gi 19908554 159 LVHLTFLHETG 169
Cdd:pfam00033 179 LLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
172-319 |
8.62e-58 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 184.00 E-value: 8.62e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 172 NPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPN 251
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 19908554 252 KLGGVLALAASVLVLFLMPLLHTSKHRSmTFRPLSQILFWALVANLLVLTWVGSQPVEHPFIIIGQLA 319
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
223-323 |
1.87e-49 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 160.72 E-value: 1.87e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 223 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLMPLLHTSKHRSMTFRPLSQILFWALVANLLVLTW 302
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 19908554 303 VGSQPVEHPFIIIGQLASLSY 323
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
53-218 |
1.14e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 153.55 E-value: 1.14e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 53 SLFFICIYFHIGRGIYYGSYLNKE--TWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAW 130
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 131 GGFSVDNPTLTRFFALHF-LLPFVIAGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMLILLVSLAL 209
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 19908554 210 FSPNLLGDP 218
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
4-174 |
7.78e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 126.75 E-value: 7.78e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 4 ICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKE--TWNIG 81
Cdd:PRK03735 50 FCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 82 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIAGLTLV 160
Cdd:PRK03735 130 VLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLA 209
|
170
....*....|....
gi 19908554 161 HLTFLHETGSNNPL 174
Cdd:PRK03735 210 HFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
4-174 |
2.22e-30 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 114.82 E-value: 2.22e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 4 ICLMTQIVTGLLLAMHYTADTALAFNSVAHTCRNVQFGWLIRNLHANGASLFFICIYFHIGRGIYYGSYLNKE--TWNIG 81
Cdd:CHL00070 42 TCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 82 VILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIAGLTLV 160
Cdd:CHL00070 122 VVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLM 201
|
170
....*....|....
gi 19908554 161 HLTFLHETGSNNPL 174
Cdd:CHL00070 202 HFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
203-304 |
1.25e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 64.81 E-value: 1.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 203 LLVSLALFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLMPLLHT-SKHRSMT 281
Cdd:COG5679 51 LCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQNPF 125
|
90 100
....*....|....*....|...
gi 19908554 282 FRPLSQILFwalVANLLVLTWVG 304
Cdd:COG5679 126 RRPVATAVF---LFGTLVTLWLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
194-304 |
1.36e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 64.64 E-value: 1.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 194 ILGfalMLILLVSLALFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLMPLL- 272
Cdd:CHL00058 44 ILG---TIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115
|
90 100 110
....*....|....*....|....*....|..
gi 19908554 273 HTSKHRSMTFRPLSQILFwalVANLLVLTWVG 304
Cdd:CHL00058 116 NVNKFQNPFRRPVATTVF---LIGTAVALWLG 144
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
201-304 |
1.49e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 61.74 E-value: 1.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19908554 201 LILLVSLALFSPNLLGDPenftpANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLMPLLHT-SKHRS 279
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQN 122
|
90 100
....*....|....*....|....*
gi 19908554 280 MTFRPLSQILFwalVANLLVLTWVG 304
Cdd:TIGR01156 123 PFRRPVATTVF---LFGTVVALWLG 144
|
|
| |
