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Conserved domains on  [gi|31282507|gb|AAN61546|]
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NADH dehydrogenase subunit III, partial (mitochondrion) [Passerella iliaca]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.17e-50

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 155.85  E-value: 1.17e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 31282507   81 QLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.17e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 155.85  E-value: 1.17e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 31282507   81 QLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 3.06e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.26  E-value: 3.06e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    20 ALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-HSPITTLTWTSTLILL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 31282507    99 LTLGLVYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 20-114 4.86e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 78.24  E-value: 4.86e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507  20 ALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLHS-PITTLTWTSTLILL 98
Cdd:COG0838  24 LLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAI 101

                        90
                ....*....|....*.
gi 31282507  99 LTLGLVYEWTQGGLEW 114
Cdd:COG0838 102 LLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.17e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 155.85  E-value: 1.17e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 31282507   81 QLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 2.01e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 147.83  E-value: 2.01e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    3 MILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 31282507   83 HSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 1.45e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 145.41  E-value: 1.45e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    2 NMILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 31282507   82 LHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 23-116 6.47e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 128.90  E-value: 6.47e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   23 FWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLHSPITTLTWTSTLILLLTLG 102
Cdd:MTH00106  22 FWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALS 101

                         90
                 ....*....|....
gi 31282507  103 LVYEWTQGGLEWAE 116
Cdd:MTH00106 102 LAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 7.11e-35

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 116.23  E-value: 7.11e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 31282507   81 QLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 2.66e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 104.21  E-value: 2.66e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 31282507   81 QLHSPitTLTWTSTLILLLTLGLVYEWTQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 3.06e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.26  E-value: 3.06e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    20 ALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-HSPITTLTWTSTLILL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 31282507    99 LTLGLVYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 5.10e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 5.10e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLAQMTP-DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 31282507   80 TQLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 31-114 1.45e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 87.14  E-value: 1.45e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   31 DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLHSPITTLTWTSTLILLLTLGLVYEWTQG 110
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 31282507  111 GLEW 114
Cdd:MTH00161 110 ALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 30-114 5.28e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 80.91  E-value: 5.28e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   30 PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLHS-PITTLTWTSTLILLLTLGLVYEWT 108
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQiGLFGFWVMYLFLIILTIGLIYEWV 111


                 ....*.
gi 31282507  109 QGGLEW 114
Cdd:MTH00055 112 KGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 6.36e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 80.81  E-value: 6.36e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWL-AQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 31282507   80 TQLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 21-115 1.26e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 79.91  E-value: 1.26e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   21 LNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLH-SPITTLTWTSTLILLL 99
Cdd:PRK06602  28 AGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFReIGWLGFVEAMIFILVL 105

                         90
                 ....*....|....*.
gi 31282507  100 TLGLVYEWTQGGLEWA 115
Cdd:PRK06602 106 LVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 20-114 4.86e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 78.24  E-value: 4.86e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507  20 ALNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLHS-PITTLTWTSTLILL 98
Cdd:COG0838  24 LLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAI 101

                        90
                ....*....|....*.
gi 31282507  99 LTLGLVYEWTQGGLEW 114
Cdd:COG0838 102 LLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 1.10e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 77.59  E-value: 1.10e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507    1 MNMILFMLTLSLTLSILLTALNFWLA-QMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 31282507   80 TQLHSPITTLTWTSTLILLLTLGLVYEWTQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 21-114 5.00e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.87  E-value: 5.00e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   21 LNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLHSPItTLTWTSTLILLLT 100
Cdd:MTH00018  20 ASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPF-GFWTMVGFLFILT 98

                         90
                 ....*....|....
gi 31282507  101 LGLVYEWTQGGLEW 114
Cdd:MTH00018  99 LGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 30-114 1.61e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.88  E-value: 1.61e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   30 PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLHS-PITTLTWTSTLILLLTLGLVYEWT 108
Cdd:MTH00030  39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQlNLFSFWIVYTFLIVLAIGLAYEWI 116


                 ....*.
gi 31282507  109 QGGLEW 114
Cdd:MTH00030 117 KGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 34-114 1.82e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.91  E-value: 1.82e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   34 KLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQLHS-PITTLTWTSTLILLLTLGLVYEWTQG 110
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114


                 ....
gi 31282507  111 GLEW 114
Cdd:PRK07928 115 GLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 24-114 3.72e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 50.37  E-value: 3.72e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   24 WLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLHS-PITTLTWTSTLILLLTLG 102
Cdd:CHL00022  30 LLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVlGVSAFIEALIFVLILIVG 107

                         90
                 ....*....|..
gi 31282507  103 LVYEWTQGGLEW 114
Cdd:CHL00022 108 LVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 21-74 2.58e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.96  E-value: 2.58e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 31282507   21 LNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092  21 LNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
24-114 3.00e-06

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 42.81  E-value: 3.00e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31282507   24 WLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQLHS-PITTLTWTSTLILLLTLG 102
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKlGLFALIEMLIFVVMLLVG 109

                         90
                 ....*....|..
gi 31282507  103 LVYEWTQGGLEW 114
Cdd:PRK07756 110 LAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
25-79 1.73e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.81  E-value: 1.73e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 31282507   25 LAQMTPDSEKLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWA 79
Cdd:PRK08489  38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 9.23e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.73  E-value: 9.23e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 31282507   36 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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