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Conserved domains on  [gi|27733637|gb|AAO21669|]
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NADH subunit 1 (mitochondrion) [Oxyzygonectes dovii]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009580)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-324 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177192  Cd Length: 324  Bit Score: 612.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    1 MISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTT 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   81 PVLAFALALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  161 IFTGGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  241 NTLSAVLFLGASLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGL 320
Cdd:MTH00134 241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320


                 ....
gi 27733637  321 PPQL 324
Cdd:MTH00134 321 PPQL 324
 
Name Accession Description Interval E-value
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 612.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    1 MISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTT 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   81 PVLAFALALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  161 IFTGGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  241 NTLSAVLFLGASLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGL 320
Cdd:MTH00134 241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320


                 ....
gi 27733637  321 PPQL 324
Cdd:MTH00134 321 PPQL 324
NADHdh pfam00146
NADH dehydrogenase;
13-309 6.53e-124

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 357.17  E-value: 6.53e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    13 LILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALALTLW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    93 TPMPL--PFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTLQT 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   171 FSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 27733637   251 AsLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:pfam00146 243 G-WLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-309 3.62e-116

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 338.64  E-value: 3.62e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   2 ISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTP 81
Cdd:COG1005   5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  82 VLAFALALTLWTPMPL--PFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNA 159
Cdd:COG1005  85 ILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637 160 IIFTGGFTLQTFSTAQEST-WLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIL 238
Cdd:COG1005 165 VLLAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27733637 239 LMNTLSAVLFLG-------ASLHHSFPETtsIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:COG1005 245 LVSALATTLFLGgwlgpfpILPLGGLPGI--LWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 612.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    1 MISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTT 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   81 PVLAFALALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  161 IFTGGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  241 NTLSAVLFLGASLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGL 320
Cdd:MTH00134 241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320


                 ....
gi 27733637  321 PPQL 324
Cdd:MTH00134 321 PPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 4-323 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 555.00  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    4 TLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVL 83
Cdd:MTH00071   3 TLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTM 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   84 AFALALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFT 163
Cdd:MTH00071  83 ALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLT 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  164 GGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTL 243
Cdd:MTH00071 163 GGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  244 SAVLFLGASLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGLPPQ 323
Cdd:MTH00071 243 STILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 2-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 549.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    2 ISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTP 81
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   82 VLAFALALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAII 161
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  162 FTGGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMN 241
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  242 TLSAVLFLGASLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGLP 321
Cdd:MTH00111 241 TLTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ...
gi 27733637  322 PQL 324
Cdd:MTH00111 321 PQL 323
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 9-324 1.58e-180

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 501.08  E-value: 1.58e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00104   3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL 168
Cdd:MTH00104  83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  169 QTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 248
Cdd:MTH00104 163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 27733637  249 LGASLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGLPPQL 324
Cdd:MTH00104 243 LGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-322 2.30e-159

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 447.43  E-value: 2.30e-159
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00218   5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL 168
Cdd:MTH00218  85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  169 QTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 248
Cdd:MTH00218 165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27733637  249 LGASLhhsfpetTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGLPP 322
Cdd:MTH00218 245 LGTSL-------TTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 9-322 1.79e-155

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 437.87  E-value: 1.79e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00040   7 LINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL 168
Cdd:MTH00040  87 LLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  169 QTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 248
Cdd:MTH00040 167 SSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILF 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27733637  249 LGASLHHS-FPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGLPP 322
Cdd:MTH00040 247 LGGGSPFNeIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
NADHdh pfam00146
NADH dehydrogenase;
13-309 6.53e-124

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 357.17  E-value: 6.53e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    13 LILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALALTLW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    93 TPMPL--PFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTLQT 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   171 FSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 27733637   251 AsLHHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:pfam00146 243 G-WLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 9-319 1.31e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 356.74  E-value: 1.31e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00195   5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL 168
Cdd:MTH00195  85 LILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  169 QTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 248
Cdd:MTH00195 165 TIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27733637  249 LGASlhhsfpetTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSG 319
Cdd:MTH00195 245 LGGG--------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 9-306 1.85e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 353.79  E-value: 1.85e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00143   4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL 168
Cdd:MTH00143  84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  169 QTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 248
Cdd:MTH00143 164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 27733637  249 LGASLhhSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLAL 306
Cdd:MTH00143 244 FGGSS--VLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-315 3.73e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 352.92  E-value: 3.73e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    5 LFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLA 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   85 FALALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  165 GFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27733637  245 AVLFLGASLhhsfpetTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPL 315
Cdd:MTH00193 241 VLMFLGGDL-------LSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-313 2.35e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 338.16  E-value: 2.35e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    7 SALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFA 86
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   87 LALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGF 166
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  167 TLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAV 246
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 27733637  247 LFLGASLhhsfpETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSL 313
Cdd:MTH00225 242 LFFGGFF-----VTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-309 3.62e-116

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 338.64  E-value: 3.62e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   2 ISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTP 81
Cdd:COG1005   5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  82 VLAFALALTLWTPMPL--PFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNA 159
Cdd:COG1005  85 ILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637 160 IIFTGGFTLQTFSTAQEST-WLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIL 238
Cdd:COG1005 165 VLLAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27733637 239 LMNTLSAVLFLG-------ASLHHSFPETtsIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:COG1005 245 LVSALATTLFLGgwlgpfpILPLGGLPGI--LWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-322 3.21e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 333.63  E-value: 3.21e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    1 MISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTT 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   81 PVLAFALALTLWTPMPLP--FPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLN 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  159 AIIFTGGFTLQTFSTAQES-TWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  238 LLMNTLSAVLFLGASLHH-SFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLT 316
Cdd:MTH00216 241 ILMSCLTTILFLGGWLSPiKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                 ....*.
gi 27733637  317 LSGLPP 322
Cdd:MTH00216 321 FNGPPP 326
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 9-322 1.94e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 331.31  E-value: 1.94e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPL--PFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGF 166
Cdd:MTH00054  85 FIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  167 TLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAV 246
Cdd:MTH00054 165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27733637  247 LFLGASLHHSFPET---TSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLSLPLTLSGLPP 322
Cdd:MTH00054 245 LFLGGWLVISGPTSyfsNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-309 2.11e-109

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 320.99  E-value: 2.11e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    1 MISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTT 80
Cdd:PRK06076   5 GPDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   81 PVLAFALALTLWTPMPL--PFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLN 158
Cdd:PRK06076  85 PVIAFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLA 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  159 AIIFTGGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIL 238
Cdd:PRK06076 165 VVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMI 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27733637  239 LMNTLSAVLFLGASLHHSFPETT---SIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:PRK06076 245 LVSALITTLFLGGWLPPFPLGGGipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-322 1.05e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 292.31  E-value: 1.05e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    2 ISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTP 81
Cdd:MTH00029   3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   82 VLAFALALTLWT--PMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNA 159
Cdd:MTH00029  83 IISFTLAILAWAivTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  160 IIFTGGFTLQTFSTAQESTWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILL 239
Cdd:MTH00029 163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  240 MNTLSAVLFLGASL----------------HHSFPETTSIFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLT 303
Cdd:MTH00029 243 MSCMMTIFFLGGWLspldgiptppeafsifEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                        330
                 ....*....|....*....
gi 27733637  304 LALVIWHLSLPLTLSGLPP 322
Cdd:MTH00029 323 LGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 7-317 7.93e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 280.90  E-value: 7.93e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    7 SALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFA 86
Cdd:MTH00010   4 SFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   87 LALTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGF 166
Cdd:MTH00010  84 LALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTF 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  167 TLQTFSTAQEStWLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAV 246
Cdd:MTH00010 164 SFSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSV 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27733637  247 LFLGASLHHSFPETtsiFLMTKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIwhLSLPLTL 317
Cdd:MTH00010 243 FFTSFIPSIFISDL---MLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMF 308
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 13-304 2.34e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 215.15  E-value: 2.34e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   13 LILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALALTLW 92
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   93 TPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL-QTF 171
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFvSSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  172 STAQESTWLilpawplaiMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLGA 251
Cdd:MTH00090 163 SLSLFVIYL---------PFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKF 233

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 27733637  252 SLHHSFpettsiflmtkaaLLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTL 304
Cdd:MTH00090 234 SFLMLF-------------LIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 9-304 3.93e-54

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 178.58  E-value: 3.93e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    9 LIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTPVLAFALA 88
Cdd:MTH00058   4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   89 LTLWTPMPLPFPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTL 168
Cdd:MTH00058  84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  169 QTFSTAQESTWLILPawPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 248
Cdd:MTH00058 164 VDFYYSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 27733637  249 LGASLhhsfpetTSIFLMtkaaLLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTL 304
Cdd:MTH00058 242 FGGGF-------VSIMLL----FHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-304 2.17e-48

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 165.89  E-value: 2.17e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637    2 ISTLFSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPNVVGPYGLLQPFADGLKLLTKEPVHPSTASPFLFLTTP 81
Cdd:CHL00032  23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   82 VLAFALALTLWTPMPLP--FPLADLNLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNA 159
Cdd:CHL00032 103 SIAVISILLSYLVIPFGyhLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  160 IIFTGGFTLQTFSTAQeSTWLILpAWPL------AIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAE 233
Cdd:CHL00032 183 SLLSNSLSTVDIVEAQ-SKYGFW-GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  234 YANILLMNTLSAVLFLGAS----LHHSFPE-------------TTSIFL-MTKAALLSVLFLWVRASYPRFRYDQLMHLI 295
Cdd:CHL00032 261 YLNLLVSSLFVTVLYLGGWnlsiPYIFIPElfeinktggvfgtTIGIFItLAKTYLFLFISITTRWTLPRLRMDQLLNLG 340


                 ....*....
gi 27733637  296 WKNFLPLTL 304
Cdd:CHL00032 341 WKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-309 6.25e-35

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 128.76  E-value: 6.25e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637   6 FSALIAPLILIIFIMLAVALLTLVERKVLGYMQLRKGPnvvgpyGLLQPFADGLKLLTKEPVHPSTASpFLFLTTPVLAF 85
Cdd:COG0650   1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637  86 ALALT------LWTPMPLPFPLADLnLGILFILALSSLTvysILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNA 159
Cdd:COG0650  74 AAMLLaallvpVLTTGPPLSFSGDL-IVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFAL 149

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27733637 160 IIFTGGFTLQTFSTAQEST---WLILPAWPLAIMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYAN 236
Cdd:COG0650 150 ALLAGSTSLSDIVAYQAAHgplLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALK 229

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 27733637 237 ILLMNTLSAVLFLGASLHHSFPETTSIFLMtKAALLSVLFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:COG0650 230 LFVLLSLFVNLFLPWGIALTLLLALLLFLL-KLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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