NS5A, partial [Hepacivirus hominis]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
HCV_NS5a_C super family | cl15181 | HCV NS5a protein C-terminal region; This is a family of proteins found in the hepatitis C ... |
1-66 | 6.24e-40 | ||
HCV NS5a protein C-terminal region; This is a family of proteins found in the hepatitis C virus. This family contains the C-terminal region of the NS5A protein. CC The molecular function of the non-structural 5a protein is uncertain. The NS5a protein is phosphorylated when expressed in mammalian cells. It is thought to interact with the ds RNA dependent (interferon inducible) kinase PKR. The actual alignment was detected with superfamily member pfam12941: Pssm-ID: 289693 Cd Length: 242 Bit Score: 130.83 E-value: 6.24e-40
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Name | Accession | Description | Interval | E-value | ||
HCV_NS5a_C | pfam12941 | HCV NS5a protein C-terminal region; This is a family of proteins found in the hepatitis C ... |
1-66 | 6.24e-40 | ||
HCV NS5a protein C-terminal region; This is a family of proteins found in the hepatitis C virus. This family contains the C-terminal region of the NS5A protein. CC The molecular function of the non-structural 5a protein is uncertain. The NS5a protein is phosphorylated when expressed in mammalian cells. It is thought to interact with the ds RNA dependent (interferon inducible) kinase PKR. Pssm-ID: 289693 Cd Length: 242 Bit Score: 130.83 E-value: 6.24e-40
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Name | Accession | Description | Interval | E-value | ||
HCV_NS5a_C | pfam12941 | HCV NS5a protein C-terminal region; This is a family of proteins found in the hepatitis C ... |
1-66 | 6.24e-40 | ||
HCV NS5a protein C-terminal region; This is a family of proteins found in the hepatitis C virus. This family contains the C-terminal region of the NS5A protein. CC The molecular function of the non-structural 5a protein is uncertain. The NS5a protein is phosphorylated when expressed in mammalian cells. It is thought to interact with the ds RNA dependent (interferon inducible) kinase PKR. Pssm-ID: 289693 Cd Length: 242 Bit Score: 130.83 E-value: 6.24e-40
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Blast search parameters | ||||
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