|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.07e-170 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 477.01 E-value: 3.07e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 1 MNPHTKLLSSLSLILGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 81 TGQWDITQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 66734957 321 TNTTIAILATLSVLTLPLSPLILTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
9.98e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 394.94 E-value: 9.98e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 1 MNPHTKLLSSLSLILGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 81 TGQWDITQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSlNPTLLTTMAIT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 66734957 321 TNTT-IAILATLSVLTLPLSPLILTIT 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.76e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 393.52 E-value: 3.76e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 1 MNPHTKLLSSLSLILGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 81 TGQWDITQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 66734957 321 TNTTIAILATLSVLTLPLSPLILTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.44e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 362.24 E-value: 7.44e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 1 MNPHTKLLSSLSLILGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 81 TGQWDITQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPnSTNHMKL-WHLPK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKMkWQFEN 319
|
330 340
....*....|....*....|....*...
gi 66734957 320 PTNTT-IAILATLSVLTLPLSPLILTIT 346
Cdd:MTH00105 320 TKPMTlLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
8.80e-101 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 300.73 E-value: 8.80e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 1 MNPHTKLLSSLSLILGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 81 TGQWDITQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 66734957 321 TNTTIAILATLSVLTLPLSPLILTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
16-336 |
1.48e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 274.89 E-value: 1.48e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTSS 95
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQL 175
Cdd:MTH00041 96 IIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 176 RKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLP 255
Cdd:MTH00041 176 RKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLP 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 256 PLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKPTNTTIAILATLSVLT 335
Cdd:MTH00041 256 PLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSILSSIS 335
|
.
gi 66734957 336 L 336
Cdd:MTH00041 336 I 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
8.87e-68 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 215.84 E-value: 8.87e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 1 MNPHTKLLSSLSLILGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 81 TGqwditqLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPtalLFLTSHSLNPTLLTTMAIT 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYhSTITLPPNSTNHMKLWHLpKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKK-NK 310
|
330 340
....*....|....*....|....*
gi 66734957 321 TNTTIAILATLSVLTLPLSPLILTI 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
16-302 |
8.03e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 182.39 E-value: 8.03e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDitqlthstSS 95
Cdd:MTH00144 16 GTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF--------SM 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALL-FLTSHSLNPTLLTTMAITSVALGGWMGLNQTQ 174
Cdd:MTH00144 88 SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 175 LRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSStKALKLATLMTSWTKSPTLNATLMLVLLSLAGL 254
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLSIISLLLSLGGL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 66734957 255 PPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTI 302
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
16-340 |
2.80e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 175.74 E-value: 2.80e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSmtnawsTGQWDITQLTHSTSS 95
Cdd:MTH00011 18 GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLKNITA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQL 175
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 176 RKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLP 255
Cdd:MTH00011 172 RPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLP 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 256 PLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYhSTITLPPNSTNhmkLWHLPKPTNTtiAILATLSVLT 335
Cdd:MTH00011 252 PFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS---LKSAPYEPKT--KILISMCTLS 325
|
....*
gi 66734957 336 LPLSP 340
Cdd:MTH00011 326 LGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
16-302 |
3.85e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 149.05 E-value: 3.85e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTgqwditqLTHSTSS 95
Cdd:MTH00197 10 GVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLSLLSV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPtaLLFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQL 175
Cdd:MTH00197 83 VLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 176 RKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATlMTSWTKSPTLN-ATLMLVLLSLAGL 254
Cdd:MTH00197 161 RQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNlVFLGLSFLSLGGL 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 66734957 255 PPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTI 302
Cdd:MTH00197 240 PPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
16-298 |
4.22e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 141.41 E-value: 4.22e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEAAIKYFLVQATASALLLF-SSMTNAwSTGQWDITQL---- 89
Cdd:COG1007 114 GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaaal 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 90 -THSTSSLLLTVAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALL-------FLTSHSLNPTLL 154
Cdd:COG1007 193 aAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveaFPGLAADWQLLL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 155 TTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGW-LAAVITYNPE-LALLTFYL--YILMTTTVFLTLSS-TKALKLAT 229
Cdd:COG1007 273 AVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYlLLGLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLlSRKGGEAE 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 66734957 230 LMTSW----TKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAY 298
Cdd:COG1007 353 EIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
16-296 |
4.59e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 127.63 E-value: 4.59e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTS 94
Cdd:PRK05777 115 GMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 95 S------------LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALL-------FLTSHSLNPTLLT 155
Cdd:PRK05777 195 DgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvaFGGLSEDWQQVLA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 156 TMAITSVALGGWMGLNQTQLRKILAFSSIAHLGW-LAAVITYNPE-LALLTFYL--YILMTTTVF--LTLSSTKALKLAT 229
Cdd:PRK05777 275 IIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYlLVGLAAGTAEgYSAVLFYLlaYLFMTLGAFgvISLLRRKGGEAES 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 66734957 230 LmTSWT----KSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRL 296
Cdd:PRK05777 355 I-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
16-297 |
7.03e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.90 E-value: 7.03e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTS 94
Cdd:TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 95 S------------LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALL-------FLTSHSLNPTLLT 155
Cdd:TIGR01770 194 NgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyiLFGFSEAWQIFLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 156 TMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPE--LALLTFYL--YILMTTTVFLTLSSTKALK----- 226
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLegIKAVLFYIfiYALMSLGAFGVLSLLRSYKdewie 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 66734957 227 -LATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLA 297
Cdd:TIGR01770 354 yISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-296 |
1.18e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.67 E-value: 1.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFI-SKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDI-------- 86
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinlvln 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 87 -----TQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFltSHSLNPTLLTTMAITS 161
Cdd:MTH00196 85 sgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 162 VALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNP----ELALLTFYLYILMTTTVFLTLSSTKALK--LATLMTSWT 235
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSGLSR 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 66734957 236 KSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRL 296
Cdd:MTH00196 243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
16-296 |
2.22e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 117.43 E-value: 2.22e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDI----TQLT 90
Cdd:MTH00199 109 GSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSILT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 91 HSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTtmAITSVALGGWMGL 170
Cdd:MTH00199 189 GDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAIGAL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 171 NQTQLRKILAFSSIAHLGW--LAAVITYNPELALLTFYL--YILMTTTVF---LTLSSTKALkLATLMTSWTKSPTLNAT 243
Cdd:MTH00199 267 NQTKIKRLLAYSGIGHMGFilFGVAIGSFESIQASLIYMiiYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNPVIALT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 66734957 244 LMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRL 296
Cdd:MTH00199 346 LALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.01e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 109.71 E-value: 1.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 23 STHWVMAWAGLELNTLAIIPFI-SKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 91 HSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLT-TALLLSTMMKLPPTALLFLTS--HSLNPT---LLTTMAITSVAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 165 GGWMGLNQTQLRKILAFSSIAHLGW----LAAVITYNPELALLTFYLYILMTTTVFLTLSS-----TKALKLATLMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYmliaLGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 66734957 236 KSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-296 |
3.66e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.45 E-value: 3.66e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 30 WAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTH----------STSSLLLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 100 VAIAMKLGLVPFHFWFPEVL-QGSSLTTALLLSTMMKLPPTAL-----LFLTSHSLNP--TLLTTMAITSVALGGWMGLN 171
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVYAIlrvltLLFGADPALFlgTLLLVLGLLTMLVGALGALA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 172 QTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYI----LMTTTVFLT----LSSTKALKLATLMTSWTKSPTLNAT 243
Cdd:COG0651 293 QRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAA 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 66734957 244 LMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRL 296
Cdd:COG0651 373 FLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-296 |
6.47e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 96.85 E-value: 6.47e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAI---------EAAIKYFLVQATASALLLFSSMTNAWSTGQ--- 83
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 84 -----------WDITQLTHSTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLppTALLFLTSHSLNPT 152
Cdd:MTH00198 280 lgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 153 LLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWL---AAVITYNPELALLTFYLYILMTT----TVFLTLSS---- 221
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligVSAGTYESLQASWTYAVTYLVSAlasfTVICTLEEfgtr 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 222 --------------TKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSL 287
Cdd:MTH00198 438 tptsrqrdgsfgnyNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVAL 517
|
330
....*....|....*.
gi 66734957 288 LGL-------FFYLRL 296
Cdd:MTH00198 518 FAIictcisaFYYIRI 533
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.17e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 83.56 E-value: 1.17e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 50 PRAIEAAIKYFLVQATASALLLF-SSMTNAWSTGQW---DITQLTHSTSSLLLTVA-------IAMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTqlsAIALALITSPSLGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 119 LQGSSLTTALLLSTMMKLPPTAL---LFLTSHSLNPT----LLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 192 AVITYNPELALLTFYLYILmtTTVFLTLSSTKALKLATLMTS----------WTKSPTLNATLMLVLLSLAGLPPLTGFL 261
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLL--AYLFMNLGAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 66734957 262 PK 263
Cdd:PRK02504 395 GK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
1.88e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 83.13 E-value: 1.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 51 RAIEAAIKYFLVQATASALLLFS-SMTNAWSTGQWDI---------TQLTHSTSSLL----LTVAIAMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 117 EVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPT-------LLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 190 LA-AVITYNPEL---ALLTFYL-YILMTTTVF----LTLSSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGF 260
Cdd:CHL00049 319 VIiGIIVGDSNDgyaSMITYMLfYIFMNLGTFacivLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
250 260 270
....*....|....*....|....*....|....*.
gi 66734957 261 LPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRL 296
Cdd:CHL00049 399 FGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-336 |
3.33e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 73.19 E-value: 3.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 49 HPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQW--DITQLTHSTSS--------LLLTVAIAMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPltaqlllfLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 119 L-QGSSLTTALLLSTMMKLPPTALL-FL------TSHSLNPTLLTtMAITSVALGGWMGLNQTQLRKILAFSSIAHLGW- 189
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKMGGYGLLrFAlplfpeASAYFAPLLAA-LGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFv 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 190 LAAVITYNPEL---ALLTFYLYILMTTTVFLTL----SSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLP 262
Cdd:COG1008 315 LLGIFALNPLGlqgAVLQMVSHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 66734957 263 KWLIIQELTKqemtsTATIIAILSLLGLFF---YLRLAYHSTITLPPNStnhmKLWHLPKPTNTTIAILATLSVLTL 336
Cdd:COG1008 395 EFLVLLGAFQ-----VNPWLAILAALGLILtaaYLLWMYQRVFFGPLKE----ELAELPDLNPRELAVLAPLAALIL 462
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-336 |
4.73e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.74 E-value: 4.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 33 LELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHS--------TSSLLLTVAIAM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlaenptvvTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 105 KLGLVPFHFWFPEVLQG-SSLTTALLLSTMMKLPPTALLFLTSHSLNP---------TLLTTMAITSVALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 175 LRKILAFSSIAHLGWLAAVITYNPELALL--TFYL--YILMTTTVFLTLSS----TKALKLATLMTSWTKSPTLNATLML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAievtYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 247 VLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHmklwHLPKPTNTTIA 326
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA----PKQEAPLGMLA 450
|
330
....*....|
gi 66734957 327 ILATLSVLTL 336
Cdd:PRK08375 451 PSLALALLSL 460
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
30-334 |
4.85e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.86 E-value: 4.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 30 WAGLELNTLAIIPFISKshhpRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTSS-----------LLL 98
Cdd:PRK08668 127 WEIMTFSSFMMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINdtstgfalivfLFL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 99 TVAIAMKLGLVPFHFWFPE-----------VLQGS-SLTTALLLSTMMKLPPTALLFLT-----SHSLNPTLLTTMAITS 161
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNIS 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 162 VALGGWMGLNQTQLRKILAFSSIAHLGW----LAAVITYNPELALLTFYLYILMTTTVFLTLSS----TKALKLATLMTS 233
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYilvgLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAviyrTGTTKISEMGGL 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 234 WTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYhsTITLPPNSTNHMK 313
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA--GVFLGQLPSDHKD 440
|
330 340
....*....|....*....|.
gi 66734957 314 LWHLPKPTNTTIAILATLSVL 334
Cdd:PRK08668 441 VKEAPLPMLIPMAILVLLNVV 461
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-306 |
5.63e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 63.42 E-value: 5.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 50 PRAIEAAIKYFLVQATASALLLFSSMTNAWSTG------QWDITQLTHSTSSLLLT---VAIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtfdllELLNLPLPFGVQTWLFLaffIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 120 QGSSLTTALLLSTMMKLPPTAL------LFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAAV 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 194 ITYNPELALLTFYLYI----LMTTTVFLTL----SSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMishgLITAALFLLVgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 66734957 266 IIQELTKqemtsTATIIAILSLLGLFF---YLRLAYHSTITLPP 306
Cdd:TIGR01972 392 ILLGSFK-----VNPVVAFLAALGIVLaaaYMLTLYKRVFFGEL 430
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-334 |
1.11e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.40 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 48 HHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHS----TSSLLLTVAIAM-------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAaptiLSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 117 EVLQGSSLTTALLLS-TM--------MKLPPtalLFLTSHSLNPTLLTTMAITSVaLGGWMGLNQTQLRKILAFSSIAHL 187
Cdd:COG1009 236 DAMEGPTPVSALLHAaTMvkagvyllARLSP---LFALSPVWLTVVAIIGAITAL-FAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 188 GWLAAVITynpeLALLTFYLYILMTTTVFltlsstKAL------------------KLATLmtsWTKSPTLNATLMLVLL 249
Cdd:COG1009 312 GYMFLALG----VGAYVAALFHLLTHAFF------KALlflgagsvihatgtrdirKMGGL---RKKMPITAITFLIGAL 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 250 SLAGLPPLTGFLPKWLIIQELTKQEMTST-ATIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKPTNTTIAIL 328
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALEAGGLGPlLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVL 458
|
....*.
gi 66734957 329 ATLSVL 334
Cdd:COG1009 459 AVLSLV 464
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-336 |
6.15e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.27 E-value: 6.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 53 IEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQL-----------THSTSSLLLTVAIAMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 122 SSLTTALLLSTMMK-------LPPTALLFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVI 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 195 TYNPELAL--LTFYLY--ILMTTTVFLTLSSTKAL----KLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAGIngAIFYLVhdMVVKTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 66734957 267 IQ-ELTKQEMTSTATIIA--ILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWhlpkptntTIAILATLSVLTL 336
Cdd:PRK12663 396 VQgALDNGAYILLALMLItsLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY--------RKLPLSILAVVVI 460
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-285 |
9.67e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.85 E-value: 9.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 109 VPFHFWFPEVLQGSSLTTALLLS-TMMKLPpTALLFLTSHSL------NPTLLTTMAITSVAlGGWMGLNQTQLRKILAF 181
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSaTMVKAG-IYLLARLNPVLggtplwQTILPLFGGLTMLT-GALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 182 SSIAHLGWLAAVITYNPELALLTFYLYI----LMTTTVFLTL------SSTKAL-KLATLmtsWTKSPTLNATLMLVLLS 250
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAgiidheTGTRDItKLGGL---RRAMPITAAAALLAALS 366
|
170 180 190
....*....|....*....|....*....|....*
gi 66734957 251 LAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAIL 285
Cdd:PRK12647 367 MAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAV 401
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
1.31e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.47 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 80 STGQWDITQL-THSTSSLLLTVAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTMM---------KLPPTall 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 143 FLTSHSLNPTLLTTMAITSVaLGGWMGLNQTQLRKILAFSSIAHLGWLAAVI---TYNPELALLTFYL-YILMTTTVFLT 218
Cdd:PRK12644 260 FADVPVWRPTVLVLGLATML-LGGWRALRQHDLKLILAYGTVSQLGFLTVLVgigTRDAALAGLAMLLaHALFKAALFLV 338
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 66734957 219 L------SSTKAL-KLATLmtsWTKSPTLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 339 VgiidhsTGTRDIrKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-334 |
2.68e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.10 E-value: 2.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 33 LELNTLAIIPFIS-KSHHPRAIEAAIKYFLVQATASALLLFS---------SMTNAWSTGQWDITQLTHSTSSL-LLTVA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 102 IAMKLGLVPFHFWFPEVLQG--SSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTT------MAITSVALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 174 QLRKILAFSSIAHLGWL-----AAVITYNPEL-----------ALLTFYLYILMTTTVFLT----LSSTKALKLATLMTS 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgVGLAALGDPAmasygeialagGIYHIVNHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 234 WTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIqELTKQEMTSTATIIAILSLLGLFFYLRLAYhsTITLPPNSTNHMK 313
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIY-ESSALFNPILGVIAMIGSVLTLASFVKVFH--TAFFGPPSEKVMN 466
|
330 340
....*....|....*....|.
gi 66734957 314 LWHLPKPTNTTIAILATLSVL 334
Cdd:PRK08376 467 VKEPPKPMLVPMLILAIAIIG 487
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-344 |
4.04e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 54.65 E-value: 4.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 51 RAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHS-----------TSSLLLTVAIAMKLGLVPFHFWFPEVL 119
Cdd:PRK06277 147 EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNAllvnptspviyGGLLLLIFGLLYGSGLPPFHTIKSDIY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 120 QGSSLTTALLLSTMMKLPPTALLF--------LTSHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLA 191
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 192 AVITYNPELALLTFYLY----ILMTTTVFL----TLSSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK06277 307 AGLALGTPLGIVAGIFHainhVIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 264 WLIIQELTKQEMTSTAtIIAILSLLGLFFYLRLAYHSTITLPPNSTNHMKLWHLPKPTNTTIAILATLSVLtLPLSPLIL 343
Cdd:PRK06277 387 LMLAQAAMQANMPELA-IIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLAVLTILCII-LGLFPDLV 464
|
.
gi 66734957 344 T 344
Cdd:PRK06277 465 T 465
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-335 |
9.28e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.58 E-value: 9.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQG---------SSLTTALLLSTMMKLPPT---ALLFLTSHSLNpTLLTTMAITSVA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDvfkANFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 164 LGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYI----LMTTTVFLTLSSTK----ALKLATLMTSWT 235
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTTKLEDCLNLWK 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 236 KSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRLAYHSTITLPPNSTN-HMKL 314
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKaNDKA 451
|
250 260
....*....|....*....|.
gi 66734957 315 WHLPKPTNTTIAILATLSVLT 335
Cdd:PRK12662 452 FKTPNAMVLCIWIMAILSIIV 472
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
1.07e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.51 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 29 AWaglELNTLAIIPFISKSHhPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTS-----------SLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 98 LTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALL--FLTSHSLNPT---LLTTMAITSVALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 173 TQLRKILAFSSIAHLGWLAAVITYNPELALLT----------FYLYILMTTTVFLTLSSTKALKlaTLMTSWTKSPTLNA 242
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAavvhtlahalFKSSLFMLIGVVDHQAGTRDIR--RLGSLWRRMPFTFV 371
|
250 260
....*....|....*....|.
gi 66734957 243 TLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
2.99e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 51.85 E-value: 2.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 20 TISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSS----------MTNAWSTGQW-DITQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 89 LTHSTSSLLLTVAIAM-------KLGLVPFHFWFPE-----------VLQGSSLTTALLLSTMMKLpptaLLFLTSHSLN 150
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYI----LIDAAIGSDF 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 151 P-TLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILM---TTTVFLTLSSTKALK 226
Cdd:PRK06458 280 PgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhslTKSAIFFASGNVLQK 359
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 66734957 227 LATLMTS-----WTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 360 YGTRDINvirglLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-336 |
4.61e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 51.36 E-value: 4.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 50 PRAIEAAIKYFLVQATASALLLFSSMT----NAWSTGQWDITQLTHSTSS--------LLLTVAIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPpgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 118 VLQ-----GSSLTTALLLST--------MMKLPPTAllfltSHSLNPtLLTTMAITSVALGGWMGLNQTQLRKILAFSSI 184
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMgaygllrfSLPLFPDA-----SHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 185 AHLGW-LAAVITYNPE-LALLTFYL--YILMTTTVFLTL----SSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPP 256
Cdd:PRK05846 311 SHMGFvTLGIFAGNQLgIQGAIFQMisHGLSSAALFLLVgvlyDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 257 LTGFLPKWLIIQELTKqemtsTATIIAILSLLGLFF---YLRLAYHSTITLPPNSTNHmklwHLPKPTNTTIAILATLSV 333
Cdd:PRK05846 391 TSGFVGEFLILLGSFQ-----VNPVIAFIATTGLILaavYSLWLYQRVMFGPVKNEVA----KLKDLNGRELLILLPLVA 461
|
...
gi 66734957 334 LTL 336
Cdd:PRK05846 462 LLL 464
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
6.66e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 50.85 E-value: 6.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 55 AAIKYFLVQATASALLLFSSMTNAWSTG-------QWDITQLTHSTSSLLLT---VAIAMKLGLVPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLApilVGFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 124 LTTALLLSTMMKLPPTALL------FLTSHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWL---AAVI 194
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYIllaAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 195 TYNPELAL--------LTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAAvfqmishgLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-292 |
8.91e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.52 E-value: 8.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 17 TTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEAAIKYFLVQATA------SALLLFSSMTNAWSTGQWDITQLT 90
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 91 H----------STSSLLLTVAIAMKLGLVPFHFWFPEV-LQGSSLTTALLLSTMMKLPPTALLFLTS-------HSLNPT 152
Cdd:PRK08676 195 AhasllspsvlGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAEQFSN 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 153 LLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTL--------SSTKA 224
Cdd:PRK08676 275 VLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhRQYRS 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 66734957 225 LKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILSLLGLFF 292
Cdd:PRK08676 355 DRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSF 422
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
9.35e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 45.33 E-value: 9.35e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 66734957 291 FFYLRLAYHSTITLPPNSTNHMKLWHLPKPTNTT-IAILATLSVLTLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
3.79e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 48.55 E-value: 3.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 55 AAIKYFLVQATASALLLFSSMTNAWSTGQWD------ITQ-LTHSTSSLLLT---VAIAMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTgllLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 125 TTALLLSTMM-KLPPTAL------LFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWL------- 190
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYIlvaaaag 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 191 ---------AAVITYNPELALLtFYLYILMTTTVfltlsSTKAL-KLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGF 260
Cdd:PRK07363 318 tqlsllgavAQMISHGLILALL-FHLVGIVERKV-----GTRDLdVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGF 391
|
....*...
gi 66734957 261 LPKWLIIQ 268
Cdd:PRK07363 392 VAEFIVFQ 399
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
4.30e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 48.57 E-value: 4.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 55 AAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTSS-----LLLTVAIAMKLGLVPFHFWFPEVLQGS-SLTTAL 128
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASpSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 129 LLSTMMKLPPTALLFLTSHSLNP-----TLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLG--------WLAAVIT 195
Cdd:PRK08667 243 MSGVMLKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 196 YNPELALLTF-------YLYILMTTTVFLTLSS----TKALKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALggalfhsLNHALFKSLLFLTAGSvvhaTGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*....
gi 66734957 265 LIIQELTkQEMTSTATIIAIL--SLLGLF 291
Cdd:PRK08667 403 LLYESFF-QSFSVADPLIKILlfSVLAIF 430
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-268 |
5.90e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 5.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 50 PRAIEAAIKYFLVQATASALLLFS-SMTNAwSTGQWDITQL----------THSTSSLLLTVAIAMKLGLVPFHFWFPEV 118
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGiALVYA-ATGTLNMADLavrldelpsgTRTALFAVLLVAFGIKAAVFPLSFWLPDS 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 119 L-QGSSLTTALLLSTMMKLPPTAL-----LFLTSHSLNpTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAA 192
Cdd:PRK12665 236 YpTAPAPVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVF 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 193 VITYNPELALLTFYLY----ILMTTTVFLTLS-------STKALKLATLMTSwtkSPTLNATLMLVLLSLAGLPPLTGFL 261
Cdd:PRK12665 315 GIALSTVAGLSGAIYYvahhITVQTTLFLVVGlierqagSSSLRRLGGLAKA---SPLLAVLFFVPALNLGGIPPFSGFI 391
|
....*..
gi 66734957 262 PKWLIIQ 268
Cdd:PRK12665 392 GKVALLE 398
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
86-293 |
2.64e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 45.90 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 86 ITQLTHSTSSLLLTVAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLF-----LTSHSLNPTL 153
Cdd:PRK12646 197 LGQADHIKNHGLFIPMIFMfllgaftKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplLGLSNMYIYI 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 154 LTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGW------LAAVITYNPELALLTFY-------LYILMTTTVFLTL- 219
Cdd:PRK12646 277 VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMimamvgIGGGYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCAl 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 220 ----------SSTKALKLATLMTSWTksPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTK--------QEMTSTATI 281
Cdd:PRK12646 357 fmgvgiidheAGTRDIRILSGMRQLF--PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVF 434
|
250
....*....|..
gi 66734957 282 IAILSLLGLFFY 293
Cdd:PRK12646 435 IGVIASIFTFTY 446
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
3.22e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.32 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 56 AIKYFLVQATASALLLFSSMTNAWSTGQWD-------ITQLTHSTSSLLLTVAI------AMKLGLVPFHFWFPE----- 117
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNmadisvkIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGsyyap 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 118 -----VLQGSSLTTALLLSTMMKLpptALLFLTSHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLGWLAA 192
Cdd:PRK07691 240 piaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILV 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 193 VITYNPELALL--TFYL--YILMTTTVFLTLSSTKAL-------KLATLMTSWtksPTLNATLMLVLLSLAGLPPLTGFL 261
Cdd:PRK07691 317 GVAMMTESGMIgaIYYLihDMIVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFY 393
|
250 260 270
....*....|....*....|....*....|....*
gi 66734957 262 PKWLIIQELTKQEMTSTATIIAILSLLGLFFYLRL 296
Cdd:PRK07691 394 GKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-291 |
4.59e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.97 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 33 LELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDIT---QLTHSTSS---LLLTVAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSalsGLHGSLKYlvfLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 107 GLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNP------TLLTTMAITSVALGGWMGLNQTQLRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 181 FSSIAHLGWLAAVITY---NPELALLTFYLYIL----MTTTVFL---TLS-STKALKLATLMTSWTKSPTLNATLMLVLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLailGSRLALEGSIAYIFnhafAKSLFFLvagALSySCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 66734957 250 SLAGLPPLTGFLPKWLIIqeLTKQEMTSTATIIAILSLLGLF 291
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF--AAGFELSVEYWILLPAMVLLLI 421
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
6.34e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.56 E-value: 6.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 33 LELNTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHS--TSSLLLTVAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATAdpEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 111 FHFWFPEVLQGSSLTTALLLS---TMMKLPPTALLFLTSHSLNPtLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgvvVKAGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 188 GWLAAvitynpelALLTFYLYILMTTTVFLTLSSTKALKLATLMTSWTKSPTLNATLMLVLL---SLAGLPPLTGFLPKW 264
Cdd:PRK07234 282 GFILA--------APLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMasfSIAGFPLLAGFVSKV 353
|
....*..
gi 66734957 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
96-298 |
1.32e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.53 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPTLLTTMAIT-----SVALGGWMGL 170
Cdd:MTH00020 214 LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVGL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 171 NQTQLRKILAFSSIAHLGWLAAVITynpelalLTFY---LYILMTTTVF--LTLSSTKALKLATL-------MTSWTKSP 238
Cdd:MTH00020 294 VQNDLKKVIAYSTCSQLGYMVVACG-------LSHYsisLFHLMNHAFFkaLLFLSAGSVIHALSdeqdmrkMGGLISFL 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 66734957 239 TLNATLMLV-LLSLAGLPPLTGFLPKWLIIQELTKQEMTSTATIIAILS-LLGLFFYLRLAY 298
Cdd:MTH00020 367 PLTYIFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
1.81e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.10 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 55 AAIKYFLVQATASALLLFSSMTNAWSTGQ--WDITQLTHSTSSLLLT--------VAIAMKLGLVPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 66734957 124 LTTALLLSTMMKLPPTALLFLT------SHSLNPTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLG 188
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNvqmlpdAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
96-268 |
1.92e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.41 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKlppTALLFLTSHS--------LNPTLLTTMAITSVALGGW 167
Cdd:MTH00032 229 ILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV---TAGVFLMIRSfplfekapLTLLIITIFGALTAFFAAT 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 168 MGLNQTQLRKILAFSSIAHLGWLAAVITYNPELALLTFYLYILMTTTVFLTLSSTKALKLATL-------MTSWTKSPTL 240
Cdd:MTH00032 306 VGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkMGGLIHSIPF 385
|
170 180
....*....|....*....|....*....
gi 66734957 241 NATLMLV-LLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 386 TYTMMLIgSFSIMGLPYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
80-268 |
2.74e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.83 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 80 STGQWDITQLTHSTSSLLLTVAI---AM-KLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALL-----FLTSHSLN 150
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWF 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 151 PTLLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLG-WLAAVITYNPELALLTFYLYILMTTTVFLTLSST-----KA 224
Cdd:MTH00207 243 NPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHS 322
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 66734957 225 LKLATLMTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 323 QDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.77e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 48 HHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTSSL--------------LLTVAIAMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 114 WFPEVLQGSSLTTALLLSTMMKLPPTALLFLTSHSLNPT-----LLTTMAITSVALGGWMGLNQTQLRKILAFSSIAHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 189 WLAAVITYNPE------LALLTFYLYILMTTTVFLTLSSTKALKLAT------LMTSWTKSPTLNATLMLVLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATFKACLFLVAGIVAHEAAtrdirkLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 66734957 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
3.01e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.51 E-value: 3.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTM-MKLPPTALLFLTSHSLNPTL-----LTTMAITSVALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 170 LNQTQLRKILAFSSIAHLG--------WLAAVITYNPELALLTFY--LYILMT-----TTVFLTLSS----TKALKLATL 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNhslfkSVLFLGAGSvwfrTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 66734957 231 MTSWTKSPTLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-267 |
1.05e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.68 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 100 VAIAMKLGLVPFHFWFPEV-LQGSSLTTALLLSTMMKLPPTALLFLT-------SHSLNPTLLtTMAITSVALGGWMGLN 171
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 172 QTQLRKILAFSSIAHLGwLAAVITYNPELALLTFYLYILMT-----------TTVFLTLSSTKALK----LATLMTSWtk 236
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAhgivssllfilVTILYDRHHTRLIKyyrgLSITMPIW-- 393
|
170 180 190
....*....|....*....|....*....|..
gi 66734957 237 sptlnATLMLVL-LSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 394 -----GTIMIVTsLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-290 |
2.15e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 39.83 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKLPPTALLFLT----------SHSLNPTLLTTMAITSVALG 165
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFAIMTKVGIYAILRLStllfgpeagaSAGFGQDWLLPGGLATLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 166 GWMGLNQTQLRKILAFSSIAHLGWLAAVITYNPElALLTFYLYILMTTTV-----FL--------------TLSSTKALK 226
Cdd:PRK12666 294 AIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNP-AATAAALYYLVHSTLaaaalFLladlverqrgaaadRLAVTPELY 372
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 66734957 227 LATLMTSWTKSPTLNATL-------MLVLLSLAGLPPLTGFLPKWLIIQELTKQEMTSTA-TIIAILSLLGL 290
Cdd:PRK12666 373 DLDEEEEEEVGVAIPATMallgllfFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAwWLWALVLLSGL 444
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
2.76e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 39.62 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 52 AIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDIT----QLTHSTSSLLLTVAIAMKLGL------------VPFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDgiadRLSELVSSGAVSGWLALLLCIlvflgpmaksaqFPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 116 PEVLQGSSLTTALL-LSTMMklppTALLFLTS-----HSLNPTLLTTMAIT---SVALGGWMGLNQTQLRKILAFSSIAH 186
Cdd:PRK07376 251 PDAMEGPTPISALIhAATMV----AAGVFLVArmypvFEQFPAVMTVIAWTgaiTAFLGASIALTQNDIKKGLAYSTISQ 326
|
....
gi 66734957 187 LGWL 190
Cdd:PRK07376 327 LGYM 330
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
16-270 |
4.18e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 16 GTTITISSTHWVMAWAGLElnTLAIIPFISKSHHPRAIEAAIKYFLVQATASALLLFSSMTNAWSTGQWDITQLTHSTSS 95
Cdd:PRK06459 84 GMAIVLTSDNYLLFLAGWE--IMTIPSYVAIALTKKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 96 LLLTVAIAMKLGLVPFHF--WFPEVLQGSSLTTALLLSTMMKLPP----TALLFLTSHS-LNPTLLTTMAI--TSVALGG 166
Cdd:PRK06459 162 ILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGvygiLKMTILTQTIpIGYFGLTILAIgaFSILFGA 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 66734957 167 WMGLNQTQLRKILAFSSIAHLGWLAA-----VITYNPELALLTFYLYILMT---------TTVFLTLSSTKALKLATLMT 232
Cdd:PRK06459 242 LYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQSITYSKK 321
|
250 260 270
....*....|....*....|....*....|....*...
gi 66734957 233 SWTKSPTLNATLMLvlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 322 IRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| |
