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Conserved domains on  [gi|73745904|gb|AAZ82031|]
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cytochrome b, partial (mitochondrion) [Neochanna cleaveri]

Protein Classification

cytochrome b( domain architecture ID 11475912)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-376 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 731.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00131   5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00131  85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00131 165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00131 245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEWA 376
Cdd:MTH00131 325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
 
Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-376 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 731.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00131   5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00131  85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00131 165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00131 245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEWA 376
Cdd:MTH00131 325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
18-369 2.09e-111

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 330.98  E-value: 2.09e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  18 PVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMHIGRG 97
Cdd:COG1290  31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  98 FYYGSylYKE----TWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATLTR 173
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904 174 FFAF-HFLFPFVMVGATVLHLLFLHQTGSNNPAG----LNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNllGD 248
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904 249 SENFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWALVA 326
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346

                       330       340       350       360
                ....*....|....*....|....*....|....*....|...
gi 73745904 327 DVLILTWIGGMPVehPYIIIGQVASTIYFAIFLVLAPIIGWAE 369
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 5-202 1.45e-74

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 229.95  E-value: 1.45e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   5 PLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA* 84
Cdd:cd00284   1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  85 FFFICIYMHIGRGFYYGSY--LYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWG 162
Cdd:cd00284  81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 73745904 163 GFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSN 202
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
14-200 2.88e-68

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 213.40  E-value: 2.88e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    14 LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMH 93
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    94 IGRGFYYG--SYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATL 171
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 73745904   172 TRFFAFHFLFPFVMVGATVLHLLFLHQTG 200
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 254-326 1.13e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 56.73  E-value: 1.13e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 73745904   254 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFR---PLTQFLFWALVA 326
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRrpvATTVFLFGTVVA 140
 
Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-376 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 731.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00131   5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00131  85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00131 165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00131 245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEWA 376
Cdd:MTH00131 325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
CYTB MTH00119
cytochrome b; Provisional
 1-375 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 647.73  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00119   6 RKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00119  86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEW 375
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00074
cytochrome b; Provisional
 1-375 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 643.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00074   6 RKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00074  86 NGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00074 166 WGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00074 246 FSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQIL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEW 375
Cdd:MTH00074 326 FWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00100
cytochrome b; Provisional
 1-375 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 620.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00100   5 RKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00100  85 NGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00100 165 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVL 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00100 245 FSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCL 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEW 375
Cdd:MTH00100 325 FWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00191
cytochrome b; Provisional
 1-364 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 604.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00191   2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00191  82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00191 162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00191 242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPI 364
Cdd:MTH00191 322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 7-361 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 572.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    7 LKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FF 86
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   87 FICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSV 166
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  167 DNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNLL 246
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  247 GDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWALVA 326
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 73745904  327 DVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVL 361
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00034
cytochrome b; Validated
 1-371 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 567.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00034   5 RKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00034  85 NGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00034 165 WGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLAL 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00034 245 LFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIA 324

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENK 371
Cdd:MTH00034 325 FWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENK 375
CYTB MTH00145
cytochrome b; Provisional
 1-373 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 549.12  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00145   6 RKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00145  86 NGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00145 166 WGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00145 246 FFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLaPIIGWAENKAL 373
Cdd:MTH00145 326 FWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKLWDNIL 377
CYTB MTH00016
cytochrome b; Validated
 1-361 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 516.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00016   6 RKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00016  86 NGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWL 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00016 166 WGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00016 246 LWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQIL 325

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVL 361
Cdd:MTH00016 326 FWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
CYTB MTH00022
cytochrome b; Validated
 1-373 5.58e-175

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 491.91  E-value: 5.58e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00022   4 RKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00022  84 NGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWV 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00022 164 WGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVY 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00022 244 FAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMA 323

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKAL 373
Cdd:MTH00022 324 FWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
CYTB MTH00053
cytochrome b; Provisional
 1-373 3.42e-168

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 474.96  E-value: 3.42e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00053   6 RKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00053  86 NGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00053 166 WGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVF 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00053 246 LFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKIL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFLVLAPIIGWAENKAL 373
Cdd:MTH00053 326 FWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLL 378
CYTB MTH00224
cytochrome b; Provisional
 1-373 7.90e-163

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 461.31  E-value: 7.90e-163
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    1 RK*HPLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHA 80
Cdd:MTH00224   6 RTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   81 NGA*FFFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWI 160
Cdd:MTH00224  86 NGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  161 WGGFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLAL 240
Cdd:MTH00224 166 WGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  241 FSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 320
Cdd:MTH00224 246 FEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 73745904  321 FWALVADVLILTWIGGMPVEHPYIIIGQVASTIYFAIFlVLAPIIGWAENKAL 373
Cdd:MTH00224 326 FWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYF-IISPAISKLWDDLL 377
CYTB MTH00033
cytochrome b; Provisional
 6-375 7.71e-129

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 375.04  E-value: 7.71e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    6 LLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*F 85
Cdd:MTH00033   8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   86 FFICIYMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFS 165
Cdd:MTH00033  87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  166 VDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALFS--P 243
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriE 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  244 NLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWA 323
Cdd:MTH00033 247 TLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWF 326

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 73745904  324 LVADVLILTWIGGMPV-EHPYIIIGQVASTIYFAIFLVLAPIIGWAENKALEW 375
Cdd:MTH00033 327 IVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLFYEY 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
18-369 2.09e-111

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 330.98  E-value: 2.09e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  18 PVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMHIGRG 97
Cdd:COG1290  31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  98 FYYGSylYKE----TWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATLTR 173
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904 174 FFAF-HFLFPFVMVGATVLHLLFLHQTGSNNPAG----LNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNllGD 248
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904 249 SENFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWALVA 326
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346

                       330       340       350       360
                ....*....|....*....|....*....|....*....|...
gi 73745904 327 DVLILTWIGGMPVehPYIIIGQVASTIYFAIFLVLAPIIGWAE 369
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 11-361 4.93e-107

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 318.42  E-value: 4.93e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   11 ND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICI 90
Cdd:MTH00086   4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   91 YMHIGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNAT 170
Cdd:MTH00086  84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  171 LTRFFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVaLLLALTSLALFSPNLLGDSE 250
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDPE 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  251 NFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQrglTFRPLTQFLFWALVADVLI 330
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVI 319

                        330       340       350
                 ....*....|....*....|....*....|.
gi 73745904  331 LTWIGGMPVEHPYIIIGQVASTIYFAIFLVL 361
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
CYTB MTH00046
cytochrome b; Validated
 14-360 5.21e-80

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 249.13  E-value: 5.21e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   14 LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMH 93
Cdd:MTH00046   9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   94 IGRGFYYGSYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATLTR 173
Cdd:MTH00046  89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  174 FFAFHFLFPFVMVGATVLHLLFLHQTGSNNPAGL-NSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNLLGDSENF 252
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  253 IPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGvLALLFSILVLMVVPilhtSKQRGLTFRPLTQFLFWALVADVLILT 332
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323

                        330       340
                 ....*....|....*....|....*...
gi 73745904  333 WIGGMPVEHPYIIIGQVASTIYFAIFLV 360
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFSVLMVLLLFI 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 5-202 1.45e-74

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 229.95  E-value: 1.45e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   5 PLLKIAND*LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA* 84
Cdd:cd00284   1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904  85 FFFICIYMHIGRGFYYGSY--LYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWG 162
Cdd:cd00284  81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 73745904 163 GFSVDNATLTRFFAFHFLFPFVMVGATVLHLLFLHQTGSN 202
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
14-200 2.88e-68

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 213.40  E-value: 2.88e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    14 LVDLPVPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMH 93
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    94 IGRGFYYG--SYLYKETWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATL 171
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 73745904   172 TRFFAFHFLFPFVMVGATVLHLLFLHQTG 200
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 203-350 2.97e-54

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 175.91  E-value: 2.97e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904 203 NPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNLLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPN 282
Cdd:cd00290   1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 73745904 283 KLGGVLALLFSILVLMVVPILHTSKQRGlTFRPLTQFLFWALVADVLILTWIGGMPVEHPYIIIGQVA 350
Cdd:cd00290  81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
254-354 1.69e-48

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 159.18  E-value: 1.69e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   254 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWALVADVLILTW 333
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 73745904   334 IGGMPVEHPYIIIGQVASTIY 354
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
85-248 7.80e-38

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 133.91  E-value: 7.80e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904    85 FFFICIYMHIGRGFYYGSYLYKE--TWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWG 162
Cdd:pfam13631   2 IFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   163 GFSVDNATLTRFFAF-HFLFPFVMVGATVLHLLFLHQTGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALF 241
Cdd:pfam13631  82 GPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161


                  ....*..
gi 73745904   242 SPNLLGD 248
Cdd:pfam13631 162 NPIWLGG 168
PRK03735 PRK03735
cytochrome b6; Provisional
 29-173 6.91e-24

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 98.25  E-value: 6.91e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   29 FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMHIGRGFYYGSYLYKE- 107
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 73745904  108 -TWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATLTR 173
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTR 190
petB CHL00070
cytochrome b6
 19-204 8.70e-18

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 81.31  E-value: 8.70e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   19 VPSNISVWW*FGSLLGLCL*SQILT**FLGMHYTSDIST*FSSVTHICRDVSYGWLI*NMHANGA*FFFICIYMHIGRGF 98
Cdd:CHL00070  26 VPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVY 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73745904   99 YYGSYLYKE--TWNIGVVLLLLVMMTAFVGHVLPWGQMS*WGAT***NLLSAVPYVGNELVQWIWGGFSVDNATLTRFFA 176
Cdd:CHL00070 106 LTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185

                        170       180
                 ....*....|....*....|....*....
gi 73745904  177 FHFLFPFVMVGATVL-HLLFLHQTGSNNP 204
Cdd:CHL00070 186 LHTFVLPLLTAVFMLmHFLMIRKQGISGP 214
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 254-325 2.33e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 58.65  E-value: 2.33e-10
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 73745904 254 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFR---PLTQFLFWALV 325
Cdd:COG5679  66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRrpvATAVFLFGTLV 140
petD CHL00058
cytochrome b6/f complex subunit IV
 254-326 4.87e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 57.70  E-value: 4.87e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 73745904  254 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFR---PLTQFLFWALVA 326
Cdd:CHL00058  65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFRrpvATTVFLIGTAVA 140
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 254-326 1.13e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 56.73  E-value: 1.13e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 73745904   254 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFR---PLTQFLFWALVA 326
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRrpvATTVFLFGTVVA 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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