|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
6.08e-61 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 182.04 E-value: 6.08e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 84374166 81 QLQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWAE 116
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
2-115 |
1.41e-54 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 165.82 E-value: 1.41e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 2 NMITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 84374166 82 LQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWA 115
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-116 |
1.86e-54 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 165.55 E-value: 1.86e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 3 MITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQL 82
Cdd:MTH00069 1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80
|
90 100 110
....*....|....*....|....*....|....
gi 84374166 83 QNPTTTLIWASTLILLLTLGLMYEWMQGGLEWAE 116
Cdd:MTH00069 81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
2.34e-44 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 140.07 E-value: 2.34e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMItFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00106 1 MNLM-LTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
|
90 100 110
....*....|....*....|....*....|....*.
gi 84374166 81 QLQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWAE 116
Cdd:MTH00106 80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
7.55e-40 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 128.56 E-value: 7.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 84374166 81 QLQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWAE 116
Cdd:MTH00042 81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
4.65e-36 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 118.85 E-value: 4.65e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80
|
90 100 110
....*....|....*....|....*....|....
gi 84374166 81 QLQNPttTLIWASTLILLLTLGLMYEWMQGGLEW 114
Cdd:MTH00203 81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
20-113 |
3.70e-28 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 98.26 E-value: 3.70e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 20 LLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWASTLILL 98
Cdd:pfam00507 2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79
|
90
....*....|....*
gi 84374166 99 LTLGLMYEWMQGGLE 113
Cdd:pfam00507 80 LLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
1.31e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 97.62 E-value: 1.31e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMSP-DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 84374166 80 TQLQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWAE 116
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
3-114 |
1.15e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 95.23 E-value: 1.15e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 3 MITFMITLSMILSIILTLLNFWIAQMSP-DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 84374166 82 LQNPTTTLIWASTLILLLTLGLMYEWMQGGLEW 114
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
6.84e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 90.82 E-value: 6.84e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMS-PDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 84374166 80 TQLQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWAE 116
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
4-114 |
1.63e-24 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 89.77 E-value: 1.63e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 4 ITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:MTH00055 8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85
|
90 100 110
....*....|....*....|....*....|..
gi 84374166 84 NPTTTLIWASTLILLLTLG-LMYEWMQGGLEW 114
Cdd:MTH00055 86 QIGLFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
4-114 |
5.55e-24 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 88.25 E-value: 5.55e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 4 ITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL- 82
Cdd:COG0838 8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFr 85
|
90 100 110
....*....|....*....|....*....|..
gi 84374166 83 QNPTTTLIWASTLILLLTLGLMYEWMQGGLEW 114
Cdd:COG0838 86 ELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.48e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 84.91 E-value: 1.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMSP-DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 84374166 80 TQLQNPTTTLIWASTLILLLTLGLMYEWMQGGLEWA 115
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
4-114 |
2.41e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 83.96 E-value: 2.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 4 ITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQ 83
Cdd:MTH00018 3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82
|
90 100 110
....*....|....*....|....*....|.
gi 84374166 84 NPTTTLIWAsTLILLLTLGLMYEWMQGGLEW 114
Cdd:MTH00018 83 APFGFWTMV-GFLFILTLGLIYEWIKGGLEW 112
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
14-115 |
1.84e-21 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 82.22 E-value: 1.84e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 14 LSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIW-A 92
Cdd:PRK06602 21 LGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVeA 98
|
90 100
....*....|....*....|...
gi 84374166 93 STLILLLTLGLMYEWMQGGLEWA 115
Cdd:PRK06602 99 MIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
12-114 |
3.92e-18 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 73.81 E-value: 3.92e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 12 MILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIW 91
Cdd:MTH00030 21 LLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFW 98
|
90 100
....*....|....*....|....
gi 84374166 92 ASTLILLLTLGLM-YEWMQGGLEW 114
Cdd:MTH00030 99 IVYTFLIVLAIGLaYEWIKGGLEW 122
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
10-114 |
8.19e-11 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 54.61 E-value: 8.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 10 LSMILSIILTLLNFWI----AQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQN- 84
Cdd:CHL00022 12 AFLIISSLIPILAFLIsgllAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVl 89
|
90 100 110
....*....|....*....|....*....|
gi 84374166 85 PTTTLIWASTLILLLTLGLMYEWMQGGLEW 114
Cdd:CHL00022 90 GVSAFIEALIFVLILIVGLVYAWRKGALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
34-114 |
2.58e-10 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 53.52 E-value: 2.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 34 KLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQLQN-PTTTLIWASTLILLLTLGLMYEWMQG 110
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114
|
....
gi 84374166 111 GLEW 114
Cdd:PRK07928 115 GLEW 118
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-74 |
8.64e-09 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 49.12 E-value: 8.64e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84374166 1 MNMITFMITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
3-114 |
4.78e-07 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 45.12 E-value: 4.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84374166 3 MITFM-ITLSMILSIILTLLNFWIAQMSPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQ 81
Cdd:PRK07756 10 MIVLIfLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVA 87
|
90 100 110
....*....|....*....|....*....|....
gi 84374166 82 LQN-PTTTLIWASTLILLLTLGLMYEWMQGGLEW 114
Cdd:PRK07756 88 YDKlGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
34-79 |
3.37e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 40.04 E-value: 3.37e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 84374166 34 KLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWA 79
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-77 |
4.94e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 39.50 E-value: 4.94e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 84374166 36 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|