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Conserved domains on  [gi|148285483|gb|ABQ57448|]
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agouti-related protein, partial [Catreus wallichii]

Protein Classification

Agouti domain-containing protein( domain architecture ID 10655107)

Agouti domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Agouti smart00792
Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing ...
 1-140 8.57e-42

Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing a black hair with a subapical yellow band. A highly homologous protein agouti signal protein (ASIP) is present in humans and is expressed at highest levels in adipose tissue where it may play a role in energy homeostasis and possibly human pigmentation.


:

Pssm-ID: 197876  Cd Length: 124  Bit Score: 135.02  E-value: 8.57e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148285483     1 ALLLCYGLLQGIQAILTSD*shsplqkmsSGLEEADRARYPSLLRKAKELSVELAGAIPRPDldQMEVQEGDGNLLQKSs 80
Cdd:smart00792   4 ATLLGCLLLLTVHSHLGAE----------EGLEDARGARSNSSLNQADFPSVSIVGLNKKPK--KISAEEAEKKLLQKK- 70

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 148285483    81 vlEPQALSTALQAAGReersSPRRCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRKI 140
Cdd:smart00792  71 --EKKALTNVLRPEPR----SPRRCVRLRDSCKGPQPPCCDPCATCYCRFFNAFCYCRKL 124
 
Name Accession Description Interval E-value
Agouti smart00792
Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing ...
 1-140 8.57e-42

Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing a black hair with a subapical yellow band. A highly homologous protein agouti signal protein (ASIP) is present in humans and is expressed at highest levels in adipose tissue where it may play a role in energy homeostasis and possibly human pigmentation.


Pssm-ID: 197876  Cd Length: 124  Bit Score: 135.02  E-value: 8.57e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148285483     1 ALLLCYGLLQGIQAILTSD*shsplqkmsSGLEEADRARYPSLLRKAKELSVELAGAIPRPDldQMEVQEGDGNLLQKSs 80
Cdd:smart00792   4 ATLLGCLLLLTVHSHLGAE----------EGLEDARGARSNSSLNQADFPSVSIVGLNKKPK--KISAEEAEKKLLQKK- 70

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 148285483    81 vlEPQALSTALQAAGReersSPRRCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRKI 140
Cdd:smart00792  71 --EKKALTNVLRPEPR----SPRRCVRLRDSCKGPQPPCCDPCATCYCRFFNAFCYCRKL 124
Agouti pfam05039
Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing ...
 97-138 4.57e-20

Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing a black hair with a subapical yellow band. A highly homologous protein agouti signal protein (ASIP)is present in humans and is expressed at highest levels in adipose tissue where it may play a role in energy homeostasis and possibly human pigmentation.


Pssm-ID: 428273  Cd Length: 43  Bit Score: 77.09  E-value: 4.57e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 148285483   97 EERSSPRRCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCR 138
Cdd:pfam05039   1 PRPPPPRRCVRLRESCKPHQVPCCDPCATCYCRFFRAFCYCR 42
 
Name Accession Description Interval E-value
Agouti smart00792
Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing ...
 1-140 8.57e-42

Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing a black hair with a subapical yellow band. A highly homologous protein agouti signal protein (ASIP) is present in humans and is expressed at highest levels in adipose tissue where it may play a role in energy homeostasis and possibly human pigmentation.


Pssm-ID: 197876  Cd Length: 124  Bit Score: 135.02  E-value: 8.57e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148285483     1 ALLLCYGLLQGIQAILTSD*shsplqkmsSGLEEADRARYPSLLRKAKELSVELAGAIPRPDldQMEVQEGDGNLLQKSs 80
Cdd:smart00792   4 ATLLGCLLLLTVHSHLGAE----------EGLEDARGARSNSSLNQADFPSVSIVGLNKKPK--KISAEEAEKKLLQKK- 70

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 148285483    81 vlEPQALSTALQAAGReersSPRRCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCRKI 140
Cdd:smart00792  71 --EKKALTNVLRPEPR----SPRRCVRLRDSCKGPQPPCCDPCATCYCRFFNAFCYCRKL 124
Agouti pfam05039
Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing ...
 97-138 4.57e-20

Agouti protein; The agouti protein regulates pigmentation in the mouse hair follicle producing a black hair with a subapical yellow band. A highly homologous protein agouti signal protein (ASIP)is present in humans and is expressed at highest levels in adipose tissue where it may play a role in energy homeostasis and possibly human pigmentation.


Pssm-ID: 428273  Cd Length: 43  Bit Score: 77.09  E-value: 4.57e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 148285483   97 EERSSPRRCVRLLESCLGHQIPCCDPCATCYCRFFNAFCYCR 138
Cdd:pfam05039   1 PRPPPPRRCVRLRESCKPHQVPCCDPCATCYCRFFRAFCYCR 42
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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