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Conserved domains on  [gi|152218380|gb|ABS31624|]
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small acid-soluble spore protein gamma-type [Bacillus subtilis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SspE COG5853
Small acid-soluble spore protein SspE (gamma-type) [Cell cycle control, cell division, ...
 1-56 1.21e-11

Small acid-soluble spore protein SspE (gamma-type) [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444555  Cd Length: 69  Bit Score: 53.31  E-value: 1.21e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 152218380  1 MANSKYSKTDVQQVKRQNQQSA--SGQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:COG5853   4 YAKEFASETNVQQVRQQNQQSAqaSGAGQFGTEFASETDVQQVRQQNQQSEAKKQQNS 61
 
Name Accession Description Interval E-value
SspE COG5853
Small acid-soluble spore protein SspE (gamma-type) [Cell cycle control, cell division, ...
 1-56 1.21e-11

Small acid-soluble spore protein SspE (gamma-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444555  Cd Length: 69  Bit Score: 53.31  E-value: 1.21e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 152218380  1 MANSKYSKTDVQQVKRQNQQSA--SGQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:COG5853   4 YAKEFASETNVQQVRQQNQQSAqaSGAGQFGTEFASETDVQQVRQQNQQSEAKKQQNS 61
SASP_gamma TIGR01442
small, acid-soluble spore protein, gamma-type; This model represents a family of small, ...
 7-56 7.20e-08

small, acid-soluble spore protein, gamma-type; This model represents a family of small, glutamine and asparagine-rich peptides that store amino acids in the spores of Bacillus subtilis and related bacteria. Most members of the family have two copies of the spore protease (GPR) cleavage motif, typically EFASE in this family, separating three low-complexity repeats. [Cellular processes, Sporulation and germination]


Pssm-ID: 273627 [Multi-domain]  Cd Length: 85  Bit Score: 44.00  E-value: 7.20e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 152218380   7 SKTDVQQVKRQNQQSA----------SGQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:TIGR01442 26 SETNVQEVKQQNAQSAaakaqssgaqSANASYGTEFASETDVQQVKKQNAKAEAKKQQSS 85
SASP_gamma pfam04259
Small, acid-soluble spore protein, gamma-type; The SASP family is a family of small, glutamine ...
 7-56 1.46e-07

Small, acid-soluble spore protein, gamma-type; The SASP family is a family of small, glutamine and asparagine-rich peptides that store amino acids in the spores of Bacillus subtilis and related bacteria.


Pssm-ID: 367886  Cd Length: 84  Bit Score: 43.36  E-value: 1.46e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 152218380   7 SKTDVQQVKRQNQQSASG--------QGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:pfam04259 27 SETNAQAVRQQNAQSAAKkaqasgasNGQFGTEFASETDAHAVRQQNQQSAANKSQNS 84
 
Name Accession Description Interval E-value
SspE COG5853
Small acid-soluble spore protein SspE (gamma-type) [Cell cycle control, cell division, ...
 1-56 1.21e-11

Small acid-soluble spore protein SspE (gamma-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444555  Cd Length: 69  Bit Score: 53.31  E-value: 1.21e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 152218380  1 MANSKYSKTDVQQVKRQNQQSA--SGQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:COG5853   4 YAKEFASETNVQQVRQQNQQSAqaSGAGQFGTEFASETDVQQVRQQNQQSEAKKQQNS 61
SASP_gamma TIGR01442
small, acid-soluble spore protein, gamma-type; This model represents a family of small, ...
 7-56 7.20e-08

small, acid-soluble spore protein, gamma-type; This model represents a family of small, glutamine and asparagine-rich peptides that store amino acids in the spores of Bacillus subtilis and related bacteria. Most members of the family have two copies of the spore protease (GPR) cleavage motif, typically EFASE in this family, separating three low-complexity repeats. [Cellular processes, Sporulation and germination]


Pssm-ID: 273627 [Multi-domain]  Cd Length: 85  Bit Score: 44.00  E-value: 7.20e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 152218380   7 SKTDVQQVKRQNQQSA----------SGQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:TIGR01442 26 SETNVQEVKQQNAQSAaakaqssgaqSANASYGTEFASETDVQQVKKQNAKAEAKKQQSS 85
SASP_gamma pfam04259
Small, acid-soluble spore protein, gamma-type; The SASP family is a family of small, glutamine ...
 7-56 1.46e-07

Small, acid-soluble spore protein, gamma-type; The SASP family is a family of small, glutamine and asparagine-rich peptides that store amino acids in the spores of Bacillus subtilis and related bacteria.


Pssm-ID: 367886  Cd Length: 84  Bit Score: 43.36  E-value: 1.46e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 152218380   7 SKTDVQQVKRQNQQSASG--------QGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:pfam04259 27 SETNAQAVRQQNAQSAAKkaqasgasNGQFGTEFASETDAHAVRQQNQQSAANKSQNS 84
SASP_gamma TIGR01442
small, acid-soluble spore protein, gamma-type; This model represents a family of small, ...
 7-56 8.22e-07

small, acid-soluble spore protein, gamma-type; This model represents a family of small, glutamine and asparagine-rich peptides that store amino acids in the spores of Bacillus subtilis and related bacteria. Most members of the family have two copies of the spore protease (GPR) cleavage motif, typically EFASE in this family, separating three low-complexity repeats. [Cellular processes, Sporulation and germination]


Pssm-ID: 273627 [Multi-domain]  Cd Length: 85  Bit Score: 41.30  E-value: 8.22e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 152218380   7 SKTDVQQVKRQNQQSAsgQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:TIGR01442  1 SGTSAQQVKKQNAQSS--MNQFGTEFASETNVQEVKQQNAQSAAAKAQSS 48
SASP_gamma pfam04259
Small, acid-soluble spore protein, gamma-type; The SASP family is a family of small, glutamine ...
 8-56 1.16e-06

Small, acid-soluble spore protein, gamma-type; The SASP family is a family of small, glutamine and asparagine-rich peptides that store amino acids in the spores of Bacillus subtilis and related bacteria.


Pssm-ID: 367886  Cd Length: 84  Bit Score: 41.05  E-value: 1.16e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 152218380   8 KTDVQQVKRQNQQSASGQGQYGTEFGSETDVQQVRKQNQSAEQNKQQNS 56
Cdd:pfam04259  1 ATNGQQVRSQNAQSAAGQGSFGTEFASETNAQAVRQQNAQSAAKKAQAS 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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