|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-183 |
1.51e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 270.54 E-value: 1.51e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 1 PVILSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTG 80
Cdd:MTH00112 3 PHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 TWDISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPAILMTLGLLSA 160
Cdd:MTH00112 83 QWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILST 162
|
170 180
....*....|....*....|...
gi 156152631 161 LVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00112 163 LIGGWGGLNQTQLRKIMAFSSIA 185
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-183 |
6.71e-88 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 261.28 E-value: 6.71e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 1 PVILSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTG 80
Cdd:MTH00135 3 PYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 TWDISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSlNPAILMTLGLLSA 160
Cdd:MTH00135 83 QWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLTST 161
|
170 180
....*....|....*....|...
gi 156152631 161 LVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00135 162 LVGGWGGLNQTQLRKILAYSSIA 184
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-183 |
4.08e-87 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 259.47 E-value: 4.08e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 1 PVILSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTG 80
Cdd:MTH00070 3 PYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 TWDISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPAILMTLGLLSA 160
Cdd:MTH00070 83 EWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLST 162
|
170 180
....*....|....*....|...
gi 156152631 161 LVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00070 163 LIGGWGGLNQTQLRKIMAYSSIA 185
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-183 |
1.87e-81 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 245.14 E-value: 1.87e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 1 PVILSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTG 80
Cdd:MTH00105 3 PLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 TWDISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPAILMTLGLLSA 160
Cdd:MTH00105 83 QWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSI 162
|
170 180
....*....|....*....|...
gi 156152631 161 LVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00105 163 LIGGWGGLNQTQLRKILAYSSIA 185
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
3-183 |
1.37e-69 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 214.79 E-value: 1.37e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 3 ILSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTW 82
Cdd:MTH00041 5 VLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 83 DISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPAILMTLGLLSALV 162
Cdd:MTH00041 85 SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLV 164
|
170 180
....*....|....*....|.
gi 156152631 163 GGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00041 165 GGWGGLNQTQTRKILAFSSIA 185
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-183 |
5.56e-65 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 202.89 E-value: 5.56e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 1 PVILSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTG 80
Cdd:MTH00200 3 PLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 TWDISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPAILMTLGLLSA 160
Cdd:MTH00200 83 QWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSV 162
|
170 180
....*....|....*....|...
gi 156152631 161 LVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00200 163 LVGGWGGLNQTQLRKILAYSSIA 185
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
6-182 |
2.38e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 144.20 E-value: 2.38e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 6 LMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWhtgtwdIS 85
Cdd:MTH00160 9 LFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------NL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 86 QLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLnpaILMTLGLLSALVGGW 165
Cdd:MTH00160 83 MLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN---FIIIIIILSAIIGAI 159
|
170
....*....|....*..
gi 156152631 166 GGLNQTQTRKIMAFSSI 182
Cdd:MTH00160 160 GGLNQTSLRKILAYSSI 176
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
3-183 |
2.76e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 141.18 E-value: 2.76e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 3 ILSLMLtsLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTW 82
Cdd:MTH00144 7 LLFLFL--MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 83 DISqltnhpacIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPA-ILMTLGLLSAL 161
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAyLLCVISVLSAL 156
|
170 180
....*....|....*....|..
gi 156152631 162 VGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSIS 178
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
4-182 |
1.01e-33 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 121.81 E-value: 1.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 4 LSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTnawhtgTWD 83
Cdd:MTH00011 8 MFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 84 ISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPAILMTLGLLSALVG 163
Cdd:MTH00011 82 FPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAG 161
|
170
....*....|....*....
gi 156152631 164 GWGGLNQTQTRKIMAFSSI 182
Cdd:MTH00011 162 GLGGMNQTQLRPLLAYSSI 180
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
5-182 |
1.08e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 105.52 E-value: 1.08e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 5 SLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDI 84
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 85 SqltnhpaCIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPmaLMLLTHSSLNPAILMTLGLLSALVGG 164
Cdd:MTH00197 81 S-------VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGG 151
|
170
....*....|....*...
gi 156152631 165 WGGLNQTQTRKIMAFSSI 182
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSI 169
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
5-183 |
8.75e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 91.33 E-value: 8.75e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 5 SLMLTSLAmGTIITMSSTHWLMAWVGLELNTLSIIPIIT-KHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWD 83
Cdd:COG1007 106 ALLLFATL-GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 84 ISQLTNH------------PACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALML-LTHSSLNPA 150
Cdd:COG1007 185 LAGIAAAlaaggansplllLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrLLVEAFPGL 264
|
170 180 190
....*....|....*....|....*....|....*....
gi 156152631 151 ------ILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:COG1007 265 aadwqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
5-183 |
3.18e-21 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 89.49 E-value: 3.18e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 5 SLMLTSLAmGTIITMSSTHWLMAWVGLELNTLSIIPIITKH-HYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWD 83
Cdd:PRK05777 107 LLVLFALL-GMMVMVSANDLLTLFLGLELLSLPLYALAALRrDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 84 ISQL--------TNHP----ACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALML-LTHSSLNPA 150
Cdd:PRK05777 186 FAGIakaladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrLLVVAFGGL 265
|
170 180 190
....*....|....*....|....*....|....*....
gi 156152631 151 ------ILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:PRK05777 266 sedwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
11-183 |
2.77e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 86.24 E-value: 2.77e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 11 LAMGTIITMSSTHWLMAWVGLELNTLSI-IPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDIS--QL 87
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSyiNL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 88 TNHPAC-----------IMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNpaILMTLG 156
Cdd:MTH00196 82 VLNSGQsfssvsvpigyLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180
....*....|....*....|....*..
gi 156152631 157 LLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIG 186
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
21-183 |
7.74e-20 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 84.29 E-value: 7.74e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 21 STHWLMAWVGLELNTLSIIPIITKHHY-PRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDISQLTNHP-------- 91
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKsPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 92 ---ACIMLTMALAMKLGLAPLHFWLPEVLQGAPLS-TALIITTWQKLAPMALM---LLTHSSLNPA--ILMTLGLLSALV 162
Cdd:pfam00361 81 lllLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIrrsLLYLPSSPFIqqILLILAIISMLL 160
|
170 180
....*....|....*....|.
gi 156152631 163 GGWGGLNQTQTRKIMAFSSIA 183
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSIS 181
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-182 |
1.71e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 84.68 E-value: 1.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 11 LAMGTIITMSSTHWLMAWVGLELNTLSI-IPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDI----S 85
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 86 QLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNpaILMTLGLLSALVGGW 165
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170
....*....|....*..
gi 156152631 166 GGLNQTQTRKIMAFSSI 182
Cdd:MTH00199 264 GALNQTKIKRLLAYSGI 280
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
5-183 |
3.11e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 78.07 E-value: 3.11e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 5 SLMLTSLAmGTIITMSSTHWLMAWVGLELNTLSIIPIIT-KHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWD 83
Cdd:TIGR01770 106 ILLLFALL-GIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 84 ISQLTNHPACIMLT------------MALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALML-------LTH 144
Cdd:TIGR01770 185 FEDLLLFLSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGF 264
|
170 180 190
....*....|....*....|....*....|....*....
gi 156152631 145 SSLNPAILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:TIGR01770 265 SEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSIS 303
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
11-182 |
5.33e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.12 E-value: 5.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 11 LAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHHYPRST---------EAATKYFLTQAAASAMLLFASTTNAWHTG- 80
Cdd:MTH00198 197 VGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGn 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 -------------TWDISQLTNHPACIMLTMALAMKLGLAPLHFWLPEVLQGAPLSTALIITTWQKLapMALMLLTHSSL 147
Cdd:MTH00198 277 egmlgtilsatleTTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVI 354
|
170 180 190
....*....|....*....|....*....|....*
gi 156152631 148 NPAILMTLGLLSALVGGWGGLNQTQTRKIMAFSSI 182
Cdd:MTH00198 355 TSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGI 389
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
28-183 |
1.02e-13 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 67.86 E-value: 1.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 28 WVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDISQLTN----------HPACIMLT 97
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 98 MALAMKLGLAPLHFWLPEVLQGAP------LSTAL-------IITTWQKLAPMALMLLTHsslnpAILMTLGLLSALVGG 164
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYPAAPspvsalLSGLLtkvgvyaILRVLTLLFGADPALFLG-----TLLLVLGLLTMLVGA 287
|
170
....*....|....*....
gi 156152631 165 WGGLNQTQTRKIMAFSSIA 183
Cdd:COG0651 288 LGALAQRDLKRLLAYSSVS 306
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
47-183 |
2.97e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 52.39 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 47 YPRSTEAATKYFLTQAAASAMLLFASTTNAWHTG--TWDISQLTNHP--------ACIMLTMALAMKLGLAPLHFWLPEV 116
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPlpltaqllLFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 117 LQGAPLSTALIittwqkLAP------------MALMLLTHSSLNPA-ILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:COG1008 236 HVEAPTAGSVL------LAGvllkmggygllrFALPLFPEASAYFApLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
49-183 |
1.06e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 50.77 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 49 RSTEAATKYFLTQAAASAMLLFASTtnaW-------HTGTWDI------SQLTNHPAC----IMLTMALAMKLGLAPLHF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFS---WlyglsggEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQ 235
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 156152631 112 WLPEVLQGAPLSTALIITTWQKLAPMALMLLTHSSLNPA-------ILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:CHL00049 236 WTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
48-183 |
1.83e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 50.05 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 48 PRSTEAATKYFLTQAAASAMLLFAST----TNAWHTGTWDISQ-LTNHP---ACIMLTMALA---MKLGLAPLHFWLPEV 116
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALaLITSPslgLALALVFVIAgiaFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 156152631 117 LQGAPLSTALIITTWQKLAPMALMLLTHSSLNPA-------ILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSfdeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIG 310
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-183 |
1.36e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 47.24 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 53 AATKYFLTQAAASAMLLFASTTNAW-HTGTWDISQLTNHP--------ACIMLTMALAMKLGLAPLHFWLPEVLQGAPLS 123
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLNLPlpfgvqtwLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTA 236
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 156152631 124 TALIIT-TWQKLAPMALM-----LLTHSSLNPA-ILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:TIGR01972 237 GSVILAgVLLKMGTYGFLrfnlpLFPDASLYFApVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
28-182 |
2.10e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.01 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 28 WVGLELNTLSIIPIITKHHY-PRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDISQL----------TNHPACIML 96
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLavkmsenptvVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 97 TMALAMKLGLAPLHFWLPEVLQGAP--LSTALIITTWQKLAPMALMLLT--HSSLNPA----ILMTLGLLSALVGGWGGL 168
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170
....*....|....
gi 156152631 169 NQTQTRKIMAFSSI 182
Cdd:PRK08376 307 VQKDVKRLLAYHSV 320
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-183 |
2.19e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 46.80 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 29 VGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDISQLTNHP--------ACIMLTMAL 100
Cdd:PRK08375 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvvtAFGFVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 101 AMKLGLAPLHFWLPEVLQGA-PLSTALIITTWQKLAPMALMLLTHSSLNPA---------ILMTLGLLSALVGGWGGLNQ 170
Cdd:PRK08375 213 ALKAAVFPLHTWLPRAYPAApPVVTALLSGLVTKVAVYALIRIYFTVFGGDfrfalglgwLLAVLALLSMLVGSLAALGQ 292
|
170
....*....|...
gi 156152631 171 TQTRKIMAFSSIA 183
Cdd:PRK08375 293 DDVKRVLAYSTVS 305
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
4-183 |
3.76e-05 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 43.06 E-value: 3.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 4 LSLMLTSlamGTIITMSSTHWLMAWVGLELNTLS---IIPIITKhhypRSTEAATKYFLTQAAASAMLLFASTTNAWHTG 80
Cdd:PRK08668 103 FALMSLA---GVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 81 TWDISQLTNH-----------PACIMLTMALAMKLGLAPLHFWLPEVLQGAP--------------------LSTALIIT 129
Cdd:PRK08668 176 TFDFADISQGlindtstgfalIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPqsfsavlsgqlsklgaygflLVLYVLPG 255
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 156152631 130 TwqKLAPMALMLLTHSSLNpAILMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:PRK08668 256 T--KLFSEFGTYRGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
36-183 |
4.99e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.88 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 36 LSIIP---IITKHHYPRSTEAATKYFLTQAAASAMLLFA----STTNAWHTGTWDISQLTNHPAC------IMLT--MAL 100
Cdd:PRK05846 142 AMLIPmyfLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPpgvqywLFLAffIAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 101 AMKLGLAPLHFWLPEVLQGAPLSTALIittwqkLAPMALMLLTH-------------SSLNPAILMTLGLLSALVGGWGG 167
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVQAPTAGSVL------LAGILLKMGAYgllrfslplfpdaSHEFAPIIITLGVIAIIYGALVA 295
|
170
....*....|....*.
gi 156152631 168 LNQTQTRKIMAFSSIA 183
Cdd:PRK05846 296 LAQTDIKKLIAYSSIS 311
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
45-183 |
9.83e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.06 E-value: 9.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 45 HHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDISQLTNH-----------PACIMLTMALAMKLGLAPLHFWL 113
Cdd:COG1009 155 YEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAaptilssplltLILLLLLLGAFGKSAQFPLHFWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 114 PEVLQG-APLS---------TA---LIIttwqKLAPmalmLLTHSSLNPAILMTLGLLSALVGGWGGLNQTQTRKIMAFS 180
Cdd:COG1009 235 PDAMEGpTPVSallhaatmvKAgvyLLA----RLSP----LFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYS 306
|
...
gi 156152631 181 SIA 183
Cdd:COG1009 307 TVS 309
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
4-182 |
7.00e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 7.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 4 LSLMLTSLAMGTIITMSSTHWLMAWVGLELNTLSIIPIITKHhypRSTEAATKYFLTQAAASAMLLFASTTNAWH-TGTW 82
Cdd:PRK06459 74 LSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIiSGTT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 83 DISQLTNHPACIMLTMALAMKLGLAPLHF--WLPEVLQGAPLSTALIITTWQKLAPMALML--LTHSSLNPA-----ILM 153
Cdd:PRK06459 151 NFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILkmTILTQTIPIgyfglTIL 230
|
170 180
....*....|....*....|....*....
gi 156152631 154 TLGLLSALVGGWGGLNQTQTRKIMAFSSI 182
Cdd:PRK06459 231 AIGAFSILFGALYAYVSENVKGLLAFSTI 259
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
36-182 |
8.62e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 39.33 E-value: 8.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 36 LSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGTWDISQLTNHPACIMLT-----MALAMKLGLAPLH 110
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVflllfLGFGIKAGIIPFH 225
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 156152631 111 FWLPEVLQGAPLS-TALIITTWQKLAPMALMLLTHSSLNPAI-----LMTLGLLSALVGGWGGLNQTQTRKIMAFSSI 182
Cdd:PRK08667 226 KWLPYAHPASPSNvSALMSGVMLKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-182 |
1.10e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 38.76 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 7 MLTSLAMGTIITMssthwlmaWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLF--------ASTTNAWH 78
Cdd:PRK06458 121 MLLALTSNNLGLM--------WVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFgtilvyanAATVMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 79 TGTWDISQLTNH-----PACIMLTMALAM-----KLGLAPLHFWLPE-----------VLQGAPLSTAL-IITTWQKLAP 136
Cdd:PRK06458 193 EMAILWTELLKHaslldPTLMKLAFVFLLigfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyAVLRYYILID 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 156152631 137 MALmlltHSSLNPAILMTLGLLSALVGGWGGLNQTQTRKIMAFSSI 182
Cdd:PRK06458 273 AAI----GSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSI 314
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-179 |
1.55e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 38.41 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 94 IMLTMALAMKLGLAPLHFWLPEVLQGAP-LSTALIITTWQKLAPMAlMLLTHSSLNPA-----ILMTLGLLSALVGGWGG 167
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTAPaPVTAVFAGLLTKVGVYA-IIRTHTLLFPGggldtLLMVVALLTMVVGILGA 291
|
90
....*....|..
gi 156152631 168 LNQTQTRKIMAF 179
Cdd:PRK12665 292 IAQSDIKRLLSF 303
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-183 |
1.71e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.09 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 53 AATKYFLTQAAASAMLLFASTTNAWHTG--TWDISQLTNHPACIMLTM--------ALAMKLGLAPLHFWLPEV--LQGA 120
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDtfTFDLAELGAKSYPLALELllyagfliAFGVKLPIFPLHTWLPDAhgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 121 PLSTaLIITTWQKLAPMALMLL-------THSSLNPAiLMTLGLLSALVGGWGGLNQTQTRKIMAFSSIA 183
Cdd:PRK12561 218 PVSM-ILAGVLLKMGGYALIRFnvqmlpdAHVYFAPA-LAILGVVNIIYGALNAFAQDNVKRRLAYSSVS 285
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
28-182 |
1.93e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 38.20 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 28 WVGLELNTLSIIPIITKHHYPRSTEAATKYFLTqaAASAML--------LFASTTNAWHTGTWDISQLTNHPACI---ML 96
Cdd:PRK08676 128 WIFAELTTVFSAMLIAILSARENIDAALKYIFI--ASTAMIfafiglifLFSLTRQALGTGTLNWTELAAHASLLspsVL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 97 TMA-------LAMKLGLAPLHFWLPEVLQGAP-LSTALIITTWQKLAPMALM----LLTHSSLNP---AILMTLGLLSAL 161
Cdd:PRK08676 206 GASflfifigFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILrlsaLLRQSGAAEqfsNVLIGLGIFSIA 285
|
170 180
....*....|....*....|.
gi 156152631 162 VGGWGGLNQTQTRKIMAFSSI 182
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSI 306
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
78-179 |
2.09e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 37.98 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 78 HTGTWDISQLTNHP-------ACIMLTMALAM-KLGLAPLHFWLPEVLQG-APLSTALIITTWQK-----LAPMALMLLT 143
Cdd:PRK12644 183 AAGTYRLSELLADPptgpavsVAVVLILVGALsKSAIVPFHFWLPGAMAApTPVSAYLHAAAMVKagiylVARLAPGFAD 262
|
90 100 110
....*....|....*....|....*....|....*.
gi 156152631 144 HSSLNPAILmTLGLLSALVGGWGGLNQTQTRKIMAF 179
Cdd:PRK12644 263 VPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAY 297
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
2-182 |
3.86e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 37.32 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 2 VILSLMLTSLAMGTIITMSSTHWLMaWVGLELNTLSIIPIITKHHYPRSTEAATKYFLTQAAASAMLLFASTTNAWHTGT 81
Cdd:PRK06277 101 LYVFLMLMGLASVSAIVLADDIFNL-YVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGT 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 82 WDISQ----LTNHPACIMLTMALAMKL-------GLAPLHFWLPEVLQGAPLSTALIITTWQKLAPMALML--------L 142
Cdd:PRK06277 180 LNITDihnaLLVNPTSPVIYGGLLLLIfgllygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggL 259
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 156152631 143 THSSLNPAILMTLGLLSALVGGWGGLNQTQTRKIMAFSSI 182
Cdd:PRK06277 260 SYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAI 299
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-183 |
8.94e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 36.05 E-value: 8.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156152631 98 MALAMKLGLAPLHFWLPEVLQGAPLS-TALIITTWQKLAPMALMLLT-------HSSLNPAILmTLGLLSALVGGWGGLN 169
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAgSVLLAGILLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCR 316
|
90
....*....|....
gi 156152631 170 QTQTRKIMAFSSIA 183
Cdd:MTH00226 317 QIDVKRLVAYSSVA 330
|
|
|