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Conserved domains on  [gi|162956846|gb|ABY25834|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Anaciaeschna triangulifera]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
6-108 2.22e-45

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00193:

Pssm-ID: 469782  Cd Length: 306  Bit Score: 147.99  E-value: 2.22e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   6 FLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFS 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100
                 ....*....|....*....|...
gi 162956846  86 LFISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLG 103
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-108 2.22e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 147.99  E-value: 2.22e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   6 FLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFS 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100
                 ....*....|....*....|...
gi 162956846  86 LFISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLG 103
NADHdh pfam00146
NADH dehydrogenase;
14-108 1.79e-25

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 96.39  E-value: 1.79e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   14 LIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFISLLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90
                  ....*....|....*..
gi 162956846   94 SIMPF--YFGLFNFNLG 108
Cdd:pfam00146  83 AVIPFgpGLVLADLNVG 99
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-108 5.09e-24

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 92.89  E-value: 5.09e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   3 LNDFLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSP 82
Cdd:COG1005    5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                         90       100
                 ....*....|....*....|....*...
gi 162956846  83 IFSLFISLLVWSIMPF--YFGLFNFNLG 108
Cdd:COG1005   85 ILAFIPALLAFAVIPFgpGLVLADLNVG 112
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-108 2.22e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 147.99  E-value: 2.22e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   6 FLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFS 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100
                 ....*....|....*....|...
gi 162956846  86 LFISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLG 103
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-108 3.85e-40

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 134.78  E-value: 3.85e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   7 LFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSL 86
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100
                 ....*....|....*....|..
gi 162956846  87 FISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFG 102
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-108 2.96e-36

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 124.60  E-value: 2.96e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   7 LFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSL 86
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100
                 ....*....|....*....|..
gi 162956846  87 FISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWG 102
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 14-108 2.72e-31

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 112.30  E-value: 2.72e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846  14 LIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFISLLVW 93
Cdd:MTH00111  12 LLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIW 91

                         90
                 ....*....|....*
gi 162956846  94 SIMPFYFGLFNFNLG 108
Cdd:MTH00111  92 TPLPMPFPLADLNLG 106
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 14-108 5.48e-31

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 111.25  E-value: 5.48e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846  14 LIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFISLLVW 93
Cdd:MTH00104   7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                         90
                 ....*....|....*
gi 162956846  94 SIMPFYFGLFNFNLG 108
Cdd:MTH00104  87 IPLPMPYPLINMNLG 101
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 10-108 1.06e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 110.22  E-value: 1.06e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846  10 VLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFIS 89
Cdd:MTH00195   5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                         90
                 ....*....|....*....
gi 162956846  90 LLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00195  85 LILWVPIPSPFGFSSINLS 103
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-108 6.25e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 108.46  E-value: 6.25e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   6 FLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFS 85
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100
                 ....*....|....*....|...
gi 162956846  86 LFISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLG 103
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 11-98 8.55e-29

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 105.25  E-value: 8.55e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846  11 LSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFISL 90
Cdd:MTH00010   7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86


                 ....*...
gi 162956846  91 LVWSIMPF 98
Cdd:MTH00010  87 LLWSLYPH 94
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-108 8.63e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 105.46  E-value: 8.63e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   3 LNDFLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSP 82
Cdd:MTH00134   2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81

                         90       100
                 ....*....|....*....|....*.
gi 162956846  83 IFSLFISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00134  82 MLALTLALTLWAPMPMPYPVTDLNLG 107
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-108 4.06e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 103.93  E-value: 4.06e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   3 LNDFLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSP 82
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100
                 ....*....|....*....|....*.
gi 162956846  83 IFSLFISLLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLG 106
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-107 4.16e-28

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 103.90  E-value: 4.16e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   4 NDFLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPI 83
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100
                 ....*....|....*....|....
gi 162956846  84 FSLFISLLVWSIMPFYFGLFNFNL 107
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNL 104
NADHdh pfam00146
NADH dehydrogenase;
14-108 1.79e-25

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 96.39  E-value: 1.79e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   14 LIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFISLLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90
                  ....*....|....*..
gi 162956846   94 SIMPF--YFGLFNFNLG 108
Cdd:pfam00146  83 AVIPFgpGLVLADLNVG 99
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 7-108 1.88e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 96.73  E-value: 1.88e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   7 LFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSL 86
Cdd:MTH00216   6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85

                         90       100
                 ....*....|....*....|....
gi 162956846  87 FISLLVWSIMPFYFG--LFNFNLG 108
Cdd:MTH00216  86 TLALIVWGVIPYERGvlISDFKIG 109
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-108 5.09e-24

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 92.89  E-value: 5.09e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   3 LNDFLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSP 82
Cdd:COG1005    5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                         90       100
                 ....*....|....*....|....*...
gi 162956846  83 IFSLFISLLVWSIMPF--YFGLFNFNLG 108
Cdd:COG1005   85 ILAFIPALLAFAVIPFgpGLVLADLNVG 112
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 10-108 6.19e-23

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 90.17  E-value: 6.19e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846  10 VLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFIS 89
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90
                 ....*....|....*....
gi 162956846  90 LLVWSIMPFYFGLFNFNLG 108
Cdd:MTH00054  85 FIAWGVIPYGEGVVLSDLG 103
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-108 2.74e-20

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 82.93  E-value: 2.74e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   6 FLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFS 85
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100
                 ....*....|....*....|....*
gi 162956846  86 LFISLLVWSIMPF--YFGLFNFNLG 108
Cdd:PRK06076  89 FIPAFLAWAVIPFgpELVIADLNVG 113
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-103 3.61e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 82.76  E-value: 3.61e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   1 MQLNDFLFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYF 80
Cdd:MTH00029   1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100
                 ....*....|....*....|...
gi 162956846  81 SPIFSLFISLLVWSIMPFYFGLF 103
Cdd:MTH00029  81 APIISFTLAILAWAIVTMDQGVF 103
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-106 5.95e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 81.48  E-value: 5.95e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846  14 LIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNYLPYYFSPIFSLFISLLVW 93
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90
                 ....*....|...
gi 162956846  94 SIMPFYFGLFNFN 106
Cdd:MTH00090  83 FVLPYFFDFLSFE 95
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 8-106 1.50e-13

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 64.18  E-value: 1.50e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   8 FEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPNKVGYCGIVQPFSDAIKLFTKEQTFPMTSNylpYYFSpIFSLF 87
Cdd:MTH00058   2 FGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSR---SWFS-LFGVF 77

                         90
                 ....*....|....*....
gi 162956846  88 ISLLVWSIMPFYFGLFNFN 106
Cdd:MTH00058  78 LLVLLVVFYCFIYGSYYSG 96
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-98 1.76e-05

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 41.71  E-value: 1.76e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162956846   7 LFEVLSGLIMFICVLVGVAFLTLLERKVLGYIQIRKGPnkvgycGIVQPFSDAIKLFTKEQTFPMTSNYLpYYFSPIFSL 86
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                         90
                 ....*....|..
gi 162956846  87 FISLLVWSIMPF 98
Cdd:COG0650   74 AAMLLAALLVPV 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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