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Conserved domains on  [gi|169648901|gb|ACA62505|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Drosophila comatifemora]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-54 2.86e-17

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 71.35  E-value: 2.86e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 169648901  15 SFVVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00161  13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFS 52
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-54 2.86e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 71.35  E-value: 2.86e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 169648901  15 SFVVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00161  13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFS 52
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-54 5.18e-07

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 44.34  E-value: 5.18e-07
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 169648901   19 MILASILSKKTlVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFS 35
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 16-54 7.83e-06

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 41.65  E-value: 7.83e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 169648901  16 FVVMILASILSKKTlVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:COG0838   20 LAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFS 57
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-54 2.86e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 71.35  E-value: 2.86e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 169648901  15 SFVVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00161  13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFS 52
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 15-54 1.81e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 61.41  E-value: 1.81e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 169648901  15 SFVVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00148  15 SPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFS 54
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 15-54 9.43e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 59.62  E-value: 9.43e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 169648901  15 SFVVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00202  15 SSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFS 54
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 17-54 1.72e-09

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 51.40  E-value: 1.72e-09
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 169648901  17 VVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00012  17 LVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFS 54
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-54 1.08e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 49.17  E-value: 1.08e-08
                         10        20
                 ....*....|....*....|.
gi 169648901  34 EKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00106  32 EKASPYECGFDPMGSARLPFS 52
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-54 3.60e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 47.61  E-value: 3.60e-08
                         10        20
                 ....*....|....*....|...
gi 169648901  32 DREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00136  31 DHEKLSPYECGFDPLGSARLPFS 53
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 20-54 7.39e-08

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 46.90  E-value: 7.39e-08
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 169648901  20 ILASILSKKTLvDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00042  20 LAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFS 53
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 17-54 1.05e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 46.41  E-value: 1.05e-07
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 169648901  17 VVMILASILSKKTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00113  15 TILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFS 52
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 32-54 1.22e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 46.53  E-value: 1.22e-07
                         10        20
                 ....*....|....*....|...
gi 169648901  32 DREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00069  29 DSEKLSPYECGFDPLGSARLPFS 51
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 15-54 2.43e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 45.66  E-value: 2.43e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 169648901  15 SFVVMILASILSK--KTLVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00203  12 LLLSLILLFIAFWlpKVNPDGEKLSPYECGFDPLGSARLPFS 53
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-54 5.18e-07

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 44.34  E-value: 5.18e-07
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 169648901   19 MILASILSKKTlVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFS 35
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 16-54 7.83e-06

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 41.65  E-value: 7.83e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 169648901  16 FVVMILASILSKKTlVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:COG0838   20 LAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFS 57
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-54 1.31e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 38.54  E-value: 1.31e-04
                         10        20
                 ....*....|....*....|...
gi 169648901  32 DREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00055  35 DSEKVSVYECGFDPFESSRIPFS 57
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 17-54 1.36e-04

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 38.31  E-value: 1.36e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 169648901  17 VVMILASILSKKTlVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:PRK06602  24 LLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFD 60
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 15-54 8.90e-03

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 33.50  E-value: 8.90e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 169648901  15 SFVVMILASILSKKTlVDREKSSPFECGFDPKSSSRLPFS 54
Cdd:MTH00018  14 SALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFS 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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