|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.79e-149 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 424.62 E-value: 1.79e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 1 MGPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 81 TGQWDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 241 NTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 169787767 321 TSTLTPSITSLSILLLPLSPMILTTT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
1.32e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 364.13 E-value: 1.32e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 1 MGPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 81 TGQWDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTtILLLTSHSLNPTLLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 241 NTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....*....
gi 169787767 321 TSTLTPSIT 329
Cdd:MTH00135 320 QLTLPLAIS 328
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
3.17e-122 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 355.38 E-value: 3.17e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 1 MGPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 81 TGQWDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 241 NTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*....
gi 169787767 321 TSTLTPSIT 329
Cdd:MTH00070 321 TNNLLSLTI 329
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
2.89e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 324.88 E-value: 2.89e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 1 MGPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 81 TGQWDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 241 NTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSN-KMK-QWSTK 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKwQFENT 320
|
330
....*....|.
gi 169787767 319 KPTSTLTPSIT 329
Cdd:MTH00105 321 KPMTLLPTLII 331
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.57e-92 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 278.78 E-value: 3.57e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 1 MGPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 81 TGQWDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 241 NTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 169787767 321 TSTLTPSITSLSILLLPLSPMILTTT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-326 |
5.30e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 260.63 E-value: 5.30e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 12 SLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQLTY 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 92 PPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMSIMSIALGGWMGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 172 QTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPMLNTTLMMTLLSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169787767 252 AGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKPTSTLTP 326
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
3.49e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 186.18 E-value: 3.49e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 1 MGPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 81 TGqwdisqLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPttiLLLTSHSLNPTLLTTMSIM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 241 NTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLppNPSNKMKQWSTKKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330 340
....*....|....*....|...
gi 169787767 321 TSTLTPSITSLSILLLPLSPMIL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
6-302 |
7.09e-47 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 161.59 E-value: 7.09e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 6 KLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWD 85
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 86 ISqltyppscLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPttILLLTSHSLNPTLLTT---MSIMSI 162
Cdd:MTH00144 86 SM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 163 ALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLiSWTKTPMLNT 242
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLG-SLKPSYKTGL 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 243 TLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00144 235 SIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-310 |
1.14e-44 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 155.71 E-value: 1.14e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 12 SLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSminawsTGQWDISQLTY 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 92 PPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMSIMSIALGGWMGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 172 QTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPMLNTTLMMTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 169787767 252 AGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYcSTITLPPNPSN 310
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-313 |
8.37e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 140.19 E-value: 8.37e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 12 SLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTgqwdisqLTY 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 92 PPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPttILLLTSHSLNPTLLTTMSIMSIALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 172 QTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLISWTKTPMLNTTLMMTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169787767 252 AGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYCSTITLPPNPSNKMK 313
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
2.34e-29 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 117.52 E-value: 2.34e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 14 ILGTTITITSNHWTMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLF-SSMINAwSTGQWDISQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 90 ------TYPP----SCLLLTTAIAIKLGLTPFHFWFPEVLQGSslttalllstlmklpPTTI------------------ 141
Cdd:COG1007 191 alaaggANSPllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGA---------------PTPVtaflatapkiaafaallr 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 142 -LLLTSHSLNP---TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTL--LTFYM--YALMTT 213
Cdd:COG1007 256 lLVEAFPGLAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 214 SIFLTLNTINTLKLSTLLIS-----WTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLL 288
Cdd:COG1007 336 GAFAVILLLSRKGGEAEEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVI 415
|
330
....*....|
gi 169787767 289 GLFFYLRLAY 298
Cdd:COG1007 416 SAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.03e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 111.28 E-value: 1.03e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 13 LILGTTITITSNHWTMAWTGLEINTLAIIPLI-SKSHHPRAIEATTKYFLTQAAASTLLLFS-------------SMINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 79 WSTGQWDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLltSHSLNPTLLTTMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 159 IMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII----IYNPKLTLLTFYMYALMTTSIFLTLNTINTLKlsTLLISW 234
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYK--NLIIEF 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787767 235 T----KTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRL 296
Cdd:MTH00196 238 SglsrRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.00e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 104.13 E-value: 1.00e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 14 ILGTTITITSNHWTMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLF-SSMINAwSTGQWDISQL-- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgMSLLYG-ATGSLSFAGIak 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 90 ------TYPP----SCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKL----PPTTILLLTSHSLNPT--- 152
Cdd:PRK05777 192 aladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 153 LLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTL--LTFYM--YALMTTSIF-----LTLNTIN 223
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvislLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787767 224 TLKLSTLL-ISWTKtPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRL 296
Cdd:PRK05777 352 AESISDFAgLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.24e-24 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 100.85 E-value: 2.24e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 23 SNHWTMAWTGLEINTLAIIPLI-SKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 91 YPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLM-KLPPTTILLLTS--HSLNPT---LLTTMSIMSIAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLvKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 165 GGWMGLNQTQTRKILAFSSISHLGWMTMII----IYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLLIS-----WT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRdygglAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 169787767 236 KTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
5.35e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 96.56 E-value: 5.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 14 ILGTTITITSNHWTMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQLTYP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 93 PSC------------LLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILL-------LTSHSLNPTL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 154 LTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTL--LTFY--MYALMTTSIFLTLNTINTLK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787767 227 ---LSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.35e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 90.85 E-value: 4.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 13 LILGTTITITSNHWTMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDI----S 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 88 QLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTtmSIMSIALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 168 MGLNQTQTRKILAFSSISHLGWMTMIIIYNP----KLTLLTFYMYALMTTSIFLTlntINTLKLSTLLISWT-----KTP 238
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSI---ILSLKLTKGLIVEVsglsrKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 169787767 239 MLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
1.41e-18 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 85.97 E-value: 1.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 13 LILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQL--- 89
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaar 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 90 --TYPPS-----CLLLTTAIAIKLGLTPFHFWFPEVlqgsslttalllstlMKLPPT--------------------TIL 142
Cdd:COG0651 196 laELDPGlllaaFALLLVGFGIKAALFPLHFWLPDA---------------YPAAPSpvsallsglltkvgvyailrVLT 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 143 LLTSHSLNP---TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII-IYNPK-LTLLTFYM--YALMTTSI 215
Cdd:COG0651 261 LLFGADPALflgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLgLAGALFHLlnHALAKALL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 216 FLT----LNTINTLKLSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLF 291
Cdd:COG0651 341 FLAagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLA 420
|
....*
gi 169787767 292 FYLRL 296
Cdd:COG0651 421 YFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
2-296 |
7.39e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 81.44 E-value: 7.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 2 GPFTKLISTMSLILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAI---------EATTKYFLTQAAASTLLLF 72
Cdd:MTH00198 186 GPRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLF 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 73 SSMINAWSTGQ--------------WDISQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLpp 138
Cdd:MTH00198 266 GCALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF-- 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 139 TTILLLTSHSLNPTLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYALM-TTSIFL 217
Cdd:MTH00198 344 TVYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALA 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 218 TLNTINTL------------------------KLSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQ 273
Cdd:MTH00198 424 SFTVICTLeefgtrtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKI 503
|
330 340 350
....*....|....*....|....*....|
gi 169787767 274 EMTATATTIALLSLLGL-------FFYLRL 296
Cdd:MTH00198 504 AFSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.71e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 67.34 E-value: 2.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 51 RAIEATTKYFLTQAAASTLLLFS-SMINAWSTGQWDIS---------QLTYPPSCLL----LTTAIAIKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELQeivnglintQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 117 EVLQGSSLTTALLLSTLMKLP----PTTILLLTSHSLNP---TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAasalATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 190 MTMIII-------YNPKLTLLTFYmyalmttsIFLTLNTINTLKLSTLLI----------SWTKTPMLNTTLMMTLLSLA 252
Cdd:CHL00049 319 VIIGIIvgdsndgYASMITYMLFY--------IFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLG 390
|
250
....*....|.
gi 169787767 253 GLPPLTGFLPK 263
Cdd:CHL00049 391 GIPPLAGFFGK 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
3.44e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.21 E-value: 3.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 33 LEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQLT--YPPSCLLLT------TAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 105 KLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPTLLTTMsIMSIALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRaypaappvvtaLLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLA-LLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 174 QTRKILAFSSISHLGWMTMIIIYNPKLTLL--TFYM--YALMTTSIFLTLNTI----NTLKLSTLLISWTKTPMLNTTLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 169787767 246 MTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
6.96e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 63.15 E-value: 6.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 50 PRAIEATTKYFLTQAAASTLLLF-SSMINAWSTGQWDIS----QLTYPPSCLLLTT------AIAIKLGLTPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSaialALITSPSLGLALAlvfviaGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 119 LQGSSLTTALLLSTLMKLPPTTI---LLLTSHSLNPT----LLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMT 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 192 MIIIYNPK--LTLLTFYM--YALMTTSIFLTLnTINTLKLSTLLIS-----WTKTPMLNTTLMMTLLSLAGLPPLTGFLP 262
Cdd:PRK02504 317 IGLVAGTEagYASMVFYLlaYLFMNLGAFACV-ILFSLRTGTDQISdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 169787767 263 K 263
Cdd:PRK02504 396 K 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-311 |
1.41e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.02 E-value: 1.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 38 LAIIP---LISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQW-----DISQLTYPPS-----CLLLTTAIAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 105 KLGLTPFHFWFPEVLQGSSlttalllstlmklPPTTILL---------------------LTSHSLNPTLLTtMSIMSIA 163
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAP-------------TAGSVLLagvllkmggygllrfalplfpEASAYFAPLLAA-LGVIGII 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 164 LGGWMGLNQTQTRKILAFSSISHLGWMTM-IIIYNPK-LTLLTFYMYA--LMTTSIFLTLNTINTlKLSTLLIS-----W 234
Cdd:COG1008 288 YGALVALAQTDLKRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVGVLYD-RTHTRDIAdlgglA 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 235 TKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKqemtaTATTIALLSLLGLFF---YLRLAYCSTITLPPNPSNK 311
Cdd:COG1008 367 KRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLILtaaYLLWMYQRVFFGPLKEELA 441
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
6.80e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.95 E-value: 6.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 50 PRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQW----DISQLTYPPSC-----LLLTTAIAIKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 120 QGSSLTTALLLSTLMKLPPTTILLL-------TSHSLNPtLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTM 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 193 IIIYNPKLTLL--TFYMYA--LMTTSIFLTLNTINTlKLSTLLIS-----WTKTPMLNTTLMMTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 311 GIFSFNELGISgaVFQMIShgLITAALFLLVGVLYE-RAHTRDIAkygglANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
250 260
....*....|....*....|....*....
gi 169787767 264 WLIIQELTKqemtaTATTIALLSLLGLFF 292
Cdd:TIGR01972 390 FLILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
3.03e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 58.24 E-value: 3.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 48 HHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQL-----------TYPPSCLLLTTAIAIKLGLTPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspLLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 117 EVLQGsslttalllstlmklpPTTI---------------LLLTSH---SLNPTLLTTMSIMSIA---LGGWMGLNQTQT 175
Cdd:COG1009 236 DAMEG----------------PTPVsallhaatmvkagvyLLARLSplfALSPVWLTVVAIIGAItalFAALIALAQTDI 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 176 RKILAFSSISHLGWMTMII---IYNPKLTLLT---FYMYAL-MTT-SIFLTLNTINTLKLSTLlisWTKTPMLNTTLMMT 247
Cdd:COG1009 300 KRVLAYSTVSQLGYMFLALgvgAYVAALFHLLthaFFKALLfLGAgSVIHATGTRDIRKMGGL---RKKMPITAITFLIG 376
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 169787767 248 LLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALL--SLLGLFFYLRLAY 298
Cdd:COG1009 377 ALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALlgAFLTAFYSFRLFF 429
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-294 |
4.34e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.70 E-value: 4.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 34 EINTLA---IIPLISKshhpRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQ----LTYPPS-------CLLLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTStgfalivFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 100 TAIAIKLGLTPFHFWFPE-----------VLQGSSLTT-ALLLSTLMKLPPTTILLLT-----SHSLNPTLLTTMSIMSI 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 163 ALGGWMGLNQTQTRKILAFSSISHLGWmtmIIIYNPKLTLLTF-------YMYALMTTSIFLTLNTI----NTLKLSTLL 231
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAViyrtGTTKISEMG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169787767 232 ISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATAtTIALLSLLGLFFYL 294
Cdd:PRK08668 361 GLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA-FMAFFGSIGSFLYV 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
2.45e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 52.13 E-value: 2.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 50 PRAIEATTKYFLTQAAASTLLLFSSM----INAWSTGQWDISQLTYPPSCLLLTT--------AIAIKLGLTPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 118 -----------VLQGSSLTTALLLSTLMKLPpttILLLTSHSLNPtLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK05846 237 ahvqaptagsvLLAGILLKMGAYGLLRFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 187 LGWMTM-IIIYNPK-LTLLTFYMYA--LMTTSIFLTLNTINTlKLSTLLIS-----WTKTPMLNTTLMMTLLSLAGLPPL 257
Cdd:PRK05846 313 MGFVTLgIFAGNQLgIQGAIFQMIShgLSSAALFLLVGVLYD-RLHTRDIAdygglAKVMPVLAAFFLFFAMASLGLPGT 391
|
250
....*....|
gi 169787767 258 TGFLPKWLII 267
Cdd:PRK05846 392 SGFVGEFLIL 401
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
2.52e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.62 E-value: 2.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 80 STGQWDISQL-TYPPSCLLLTTAIAI-------KLGLTPFHFWFPEVLQGSSLTTALLLSTLM---------KLPPTtil 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 143 LLTSHSLNPTLLTtMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII-IYNPKLTLLTFYM---YALMTTSIFLT 218
Cdd:PRK12644 260 FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMllaHALFKAALFLV 338
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 169787767 219 LNTI-------NTLKLSTLlisWTKTPMLNTTLMMTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 339 VGIIdhstgtrDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
4.90e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.58 E-value: 4.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 29 AWtglEINTLAIIPLISKSHhPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQLTYPPSCL---LLTTAIAIK 105
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAekpGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 106 LGLT--------PFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSL--NPT---LLTTMSIMSIALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 173 TQTRKILAFSSISHLGWM-TMIIIYNP-KLT--LLTFYMYALMTTSIFLTLNTIN----TLKLSTLLISWTKTPMLNTTL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 245 MMTLLSLAGLPPLTGFLPKWLIIQELTKQEMtATATTIALLSLLGLFFYLRLAYCSTITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.06e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 50.10 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 33 LEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSminAWSTGQWDI-------SQLTYPPSCL------LL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylaVKMSENPTVVakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 99 TTAIAIKLGLTPFHFW----FPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPT----LLTTMSIMSIALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWlpdaYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 171 NQTQTRKILAFSSISHLGWM------TMIIIYNPKLT----------LLTFYMYALMTTSIFLT-------LNTINTLKL 227
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagaviyeTGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*....
gi 169787767 228 STLLISWTKTPMlntTLMMTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTI---AFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
69-283 |
1.51e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 49.92 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 69 LLLFSSMINAWS-TGQWDISQLT-----------YPPSCLLLTTAIAIKLGLTPFHFWFPEVlqgsslttalllstlMKL 136
Cdd:PRK12647 160 LALLAGLILLGNvTGTYSLSELLasgdvirehplYLAILLLVLGGAFTKSAQFPFHFWLPNA---------------MEA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 137 P-PTTILLltsHS-------------LNP---------TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMI 193
Cdd:PRK12647 225 PtPVSAYL---HSatmvkagiyllarLNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVML 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 194 IIYNPKLTLLTFYMY----ALMTTSIFLTLNTIN-------TLKLSTLlisWTKTPMLNTTLMMTLLSLAGLPPLTGFLP 262
Cdd:PRK12647 302 LGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAALSMAGLPPLFGFLA 378
|
250 260
....*....|....*....|.
gi 169787767 263 KWLIIQELTKQEMTATATTIA 283
Cdd:PRK12647 379 KELIYEALLEAPLWSLILTVA 399
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-292 |
1.53e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.54 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 20 TITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFL------TQAAASTLLLFSS----MINAWSTGQWdiSQL 89
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANaatvMGDGEMAILW--TEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 90 TYPPSCL---LLTTAIAI-------KLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKLppttILLLTSHS 148
Cdd:PRK06458 202 LKHASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYI----LIDAAIGS 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 149 LNP-TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKL----TLLTFYMYALMTTSIFLTLNTIn 223
Cdd:PRK06458 278 DFPgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAIFFASGNV- 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787767 224 TLKLSTLLIS-----WTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMtaTATTIALLSLLGLFF 292
Cdd:PRK06458 357 LQKYGTRDINvirglLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGP--LLIAILLLLLLTLAF 428
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
1.12e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 46.84 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 101 AIAIKLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKLPpttILLLTSHSLNPTLLtTMSIMSIALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKahveapvagsvLLAGILLKLGGYGLVRLSWP---ILPLGAQNLAPAVI-AMGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 170 LNQTQTRKILAFSSISHLGWMTMIIIYNP--KLTLLTFYMYAL-MTTSIFLTLNTINTLKLSTLLISWTK-----TPMLN 241
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDiiGLTGSIFIMLAHgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWG 394
|
170 180
....*....|....*....|....*.
gi 169787767 242 TTLMMTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
2.12e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.32 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 7 LISTMSL-ILGTTITITSNHWTM---AWTGLEINTLAIIPLISKSHHPRAIeattkyFLTQAAASTLLLFSSMINAWS-T 81
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 82 GQWDISQLTYPPSCLLLTTAIAIKLGLTPFHF--WFPEVLQGSSLTTALLLSTLMKLPP----TTILLLTSHSLNPTLLT 155
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGvygiLKMTILTQTIPIGYFGL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 156 TMSIM---SIALGGWMGLNQTQTRKILAFSSISHLGWM-----TMIIIYNPK--------LTLLTFYM-YALMTTSIFLT 218
Cdd:PRK06459 228 TILAIgafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLItsiehfslITVILYSFaHSVAKTGLFLS 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 169787767 219 LNTINTLKLSTLLISWTKTPMLNTTLMMtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-267 |
2.24e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.88 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 152 TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMY----ALMTTSIFLTLNTI----N 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfG 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 169787767 224 TLKLSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.28e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 46.10 E-value: 2.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 33 LEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQL-TYPPSCL-LLTTAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 111 FHFWFPEVlqgsslttalllstlMKLPPTTILLLTS-----------------HSLNPTLLTTMSIMSIALGGWMGLNQT 173
Cdd:PRK07234 203 SGLWLPLT---------------HSEAEPPVSALLSgvvvkagvfplvrcaldVPGLDLIVRIFGVGTALLGVLFALLEK 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 174 QTRKILAFSSISHLGWmtmiIIYNPKLTLLTFYMYALMTTSIFLTLNTINTLKLSTLliswtKTPMLNTTLMMTL----L 249
Cdd:PRK07234 268 DLKRMLAFSTISQLGF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTEL-----ISQMLGIGKWIPLtmasF 338
|
250 260
....*....|....*....|..
gi 169787767 250 SLAGLPPLTGFLPKWLIIQELT 271
Cdd:PRK07234 339 SIAGFPLLAGFVSKVLTLKNLL 360
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
70-305 |
2.61e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.84 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 70 LLFSSMINAWSTGqwDISQLTYPpsCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTS--H 147
Cdd:MTH00020 192 LDFSSVFNMVVSA--PSSDITLI--CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 148 SLNPTLLTTMSI---MSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII-IYNPKLTLLTFYMYALMTTSIFLTLNTI- 222
Cdd:MTH00020 268 EQAPLALIIVTIvgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVi 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 223 -------NTLKLSTLLISwtkTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLS-LLGLFFYL 294
Cdd:MTH00020 348 halsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSI 424
|
250
....*....|.
gi 169787767 295 RLAYCSTITLP 305
Cdd:MTH00020 425 RLIYLTFLSNT 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
152-325 |
1.28e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.79 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 152 TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTM-IIIYNPK-LTLLTFYMYALMT--TSIFLTLNTINTL-- 225
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtg 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 226 --KLSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTATATTIA--LLSLLGLFFYLRLAYCS 300
Cdd:PRK12663 353 yrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAYWG 432
|
170 180
....*....|....*....|....*
gi 169787767 301 TITLPPNPSNKMKQWsTKKPTSTLT 325
Cdd:PRK12663 433 DKDGEEVNFKPIPLY-RKLPLSILA 456
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-324 |
2.37e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.71 E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 34 EINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQLTY-----PPSCLLLTTAIAIKLG- 107
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvnPTSPVIYGGLLLLIFGl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 108 -----LTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILL--------LTSHSLNPTLLTTMSIMSIALGGWMGLNQTQ 174
Cdd:PRK06277 210 lygsgLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 175 TRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYA----LMTTSIFLTLNTI-------NTLKLSTLLiswTKTPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVsyrtktsNLRKLGGLL---PVMPVVAFM 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 244 LMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRLAYcsTITLPPNPsNKMKQWSTKKPTST 323
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP-EELEYKNKKVPKYA 443
|
.
gi 169787767 324 L 324
Cdd:PRK06277 444 V 444
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
5.63e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 41.66 E-value: 5.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 13 LILGTTITITSNHWTMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAA------STLLLFSSMINAWSTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 87 SQLT-----YPPSCLLLT-----TAIAIKLGLTPFHFWFPEV-LQGSSLTTALLLSTLMKLPPTTILLLTS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 149 LNPTLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTL--LTFYM--YALMTTSIFLTLNTINT 224
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALfwMLFHMlaHSLVKSGLFFSAGILHR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169787767 225 LKLST----LLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDrfdrIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-296 |
5.99e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 41.47 E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 152 TLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTM-IIIYNPKLTLLTFYMYA---LMTTSIFLTLNTINTL-- 225
Cdd:PRK07691 276 YLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVgVAMMTESGMIGAIYYLIhdmIVKAALFLLIGIMIKItg 355
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787767 226 -----KLSTLLISWtktPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLSLLGLFFYLRL 296
Cdd:PRK07691 356 ttdlkKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
1.27e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 40.34 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 96 LLLTTAIAIKLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLmklppTTILLLTSHSLNpTLLTTMSIMSIAL 164
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTKVGVYAIIR-----THTLLFPGGGLD-TLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 165 GGWMGLNQTQTRKILAFSSISHLGWMTM-IIIYNPK-LTLLTFYM--YALMTTSIFLTLNTI-------NTLKLSTLLIS 233
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFgIALSTVAgLSGAIYYVahHITVQTTLFLVVGLIerqagssSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|....*
gi 169787767 234 wtkTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 367 ---SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.43e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.58 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 48 HHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQWDISQLTYPPSC--------LLLTTAIAIKLGLT------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 114 WFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLNPT-----LLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 189 WMTMIIIYNPK------LTLLTFYM--YALMTTSIFLTLNTI----NTLKLSTLLISWTKTPMLNTTLMMTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 169787767 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
2.91e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.56 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 111 FHFWFPEVLQGSSLTTALLLSTLMKLPPTTIL-----LLTSHSLNPTLLTTMSIMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 186 HLGWMTMIIIYNPKLTLLTFYM--YALMTTSIFLTLNTI---------NTLKLSTLLISwtkTPMLNTTLMMTLLSLAGL 254
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 169787767 255 PPLTGFLPKWLIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
148-303 |
4.07e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.84 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 148 SLNPTLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII-IYNPKLTLLTFYMYALMTTSIFLTLNTI---- 222
Cdd:MTH00210 272 PLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCgISNYSTSLFHLMNHAFFKALLFLSAGSVihav 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 223 ----NTLKLSTLLISwtkTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTKQEMTATATTIALLS-LLGLFFYLRLA 297
Cdd:MTH00210 352 sdeqDMRKMGGLIKS---IPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLI 428
|
....*.
gi 169787767 298 YCSTIT 303
Cdd:MTH00210 429 YLTFIT 434
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-272 |
5.35e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.58 E-value: 5.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 91 YPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTIL-----LLTSHSLNPTLLTTMSIMSIALG 165
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFG 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 166 GWMGLNQTQTRKILAFSSISHLGW-MTMI-----IIYNPKLTLLTFYM------------YALMTTSIFLTLNTIN---- 223
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYVfvlfaalfhlmnHAIFKCALFMGVGIIDheag 368
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 169787767 224 TLKLSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
5.41e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 38.53 E-value: 5.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 38 LAIIPL---ISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTG--QWDISQL---TYPPSCLLLTTA-----IAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 105 KLGLTPFHFWFPEV-LQGSSLTTALLLSTLMKLPPTTIL------LLTSHSLNPTLLTTMSIMSIALGGWMGLNQTQTRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 178 ILAFSSISHLGWMTMIIIYNPKLTLL--TFYM--YALMTTSIFLTLNTI-------NTLKLSTLLISWTKTPMLNTTLMM 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILaaVFQMisHGLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 169787767 247 TLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-120 |
7.12e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.14 E-value: 7.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 10 TMSLILGTTITITSNHWTM---AW--TGLEINTLaiipLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMINAWSTGQW 84
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSL 181
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 169787767 85 DISQL-----TYPPS------CLLLTTAIAIKLGLTPFHFWFPEVLQ 120
Cdd:PRK08168 182 SLSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVME 228
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
7.20e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.09 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 55 ATTKYFLTQAAASTLLLFSSMINAWSTGQ--WDISQLT---YPPSCLLLT-----TAIAIKLGLTPFHFWFPE------- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169787767 118 ----VLQGSSLTTALLLSTLMKLPpttiLLLTSHSLNPTLLTTMSIMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12561 218 pvsmILAGVLLKMGGYALIRFNVQ----MLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
150-268 |
7.53e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 38.21 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787767 150 NPTLLTTMSiMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII-IYNPKLTLLTFYMYALMTTSIFLTLNTI-----N 223
Cdd:MTH00207 243 NPALLLTAS-LTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLgLGMPKLALFHLITHALFKALLFVCAGSLihshhH 321
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 169787767 224 TLKLSTLLISWTKTPMLNTTLMMTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| |
