|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-611 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1253.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 1 SIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYM 80
Cdd:CHL00025 49 SIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 81 SLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDL 160
Cdd:CHL00025 129 SFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 161 FEIFNNLIYNNEVPFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP 240
Cdd:CHL00025 209 FEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 241 YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSME 320
Cdd:CHL00025 289 YIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSME 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 321 AIVGYSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFR 400
Cdd:CHL00025 369 PIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFR 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 401 IYLLTFEGHLNIYFQKYSGKKSSSFYSIKLWGKEEQKMINRNfrlFPLLTMKKNE-------KPYRIGGNVKKGALITIT 473
Cdd:CHL00025 449 IYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKINKL---LLLLTMNNNErvsffskKTYKIDGNVRNMIRSFIT 525
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 474 NFGYKEAFSYPHESDNTMLFPMLILLLFTLFVGAIAIPFNQER--VDILSKLLTPSINLLHQNSNDFEDSYQFLTNATFS 551
Cdd:CHL00025 526 IFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGidLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFS 605
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 552 VSIACFGIFTAFLLYKPFYSSLQNLNLLNSFAKRGPKRILLDKIIYLIYDWSYNRGYIDT 611
Cdd:CHL00025 606 VSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIYNWSYNRGYIDA 665
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-610 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 642.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 4 MIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLF 83
Cdd:PRK07376 52 AVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLF 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 84 NTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEI 163
Cdd:PRK07376 132 SSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADR 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 164 FNNLIYNNEVPFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM 243
Cdd:PRK07376 212 LSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVM 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 244 NLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIV 323
Cdd:PRK07376 292 TVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVV 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 324 GYSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYL 403
Cdd:PRK07376 372 GHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYF 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 404 LTFEGhlniyfqKYSGkksssfysiklwgkEEQKMINRnfrlfpLLTMKKNEKPYRIGGNVKKGalititnfGYKEAFSy 483
Cdd:PRK07376 452 LTFEG-------EFRG--------------NDKELQKE------LLAAADAPGHHEGHHEEHGE--------HHHHSGS- 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 484 PHESDNTMLFPMLILLLFTLFVGAIAIPFNqervDILSKLLTPSiNLLHQNSNDFEDSyQFLTNATFSVSIACFGIFTAF 563
Cdd:PRK07376 496 PHESPWTMTLPLVVLAVPSVLIGLLGTPWN----NRFEAFLHAP-GEALEAAAHFEWG-EFLILAGASVGIALIGITLAS 569
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 169957018 564 LLYkpfyssLQNLNLLNSFAKRGPKrilldkiiylIYDWSYNRGYID 610
Cdd:PRK07376 570 LMY------LLKKIDPAAIAERFPP----------LYQFSLNKWYLD 600
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-566 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 525.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 14 QINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTS 93
Cdd:COG1009 51 AVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLS 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 94 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynnev 173
Cdd:COG1009 131 DNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL----- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 174 PFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIIT 253
Cdd:COG1009 206 SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAIT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 254 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspekSQNM 333
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDI 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 334 VFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSW---LYSPIFAIIAWSTAGLTAFYMFRIYLLTFeghl 410
Cdd:COG1009 357 RKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF---- 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 411 niyfqkysgkksssfysiklWGKEEQKMINRnfrlfplltmkknekpyriggnvkkgalititnfgykeafsyPHESDNT 490
Cdd:COG1009 433 --------------------FGKPRPKTPKH------------------------------------------PHESPWL 450
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169957018 491 MLFPMLILLLFTLFVGAIAIPFNQERVDILSkLLTPSINLLHQnsndfedsyQFLTNATFSVSIAcfGIFTAFLLY 566
Cdd:COG1009 451 MTLPLVVLAVLSLVLGLLLPGLLEGLLAPAA-VLGGELHLAHG---------LLLNALPLLLSLL--GIALGYLLY 514
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
17-610 |
5.95e-180 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 523.18 E-value: 5.95e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 17 GSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNL 96
Cdd:PRK06590 58 GRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 97 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQdlfEIFNNLIYNNEVPFL 176
Cdd:PRK06590 138 LQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 177 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 256
Cdd:PRK06590 215 ALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALF 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 257 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNMVFM 336
Cdd:PRK06590 295 AAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKM 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFA-IIAWSTAGLTAFYMFRIYLLTFeghlniyfq 415
Cdd:PRK06590 367 GGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVF--------- 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 416 kysgkksssfysiklWGKEEQKMINrnfrlfplltmkknekpyriggnvkkgalititnfgykeafsyPHESDNTMLFPM 495
Cdd:PRK06590 438 ---------------HGKEKEKIHH-------------------------------------------PHESPAVMTLPL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 496 LILLLFTLFVGAIAIPFnqervdILSKLLTPSINLLHQNSNDFEdsyqfLTNATFSVSIACFGIFTAFLLYkpfyssLQN 575
Cdd:PRK06590 460 IVLAVLSVFAGALIVPP------FLGVLPLTTELAHGEAEHHLP-----VWVALLPLVVALAGIALAWLLY------LKK 522
|
570 580 590
....*....|....*....|....*....|....*
gi 169957018 576 LNLLNSFAKRGPkrilldkiiyLIYDWSYNRGYID 610
Cdd:PRK06590 523 PTLPTSIAAPGR----------FLYTLLRNKYYFD 547
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
16-605 |
2.00e-157 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 464.83 E-value: 2.00e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 16 NGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSN 95
Cdd:TIGR01974 56 EGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADN 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 96 LIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNnevpf 175
Cdd:TIGR01974 136 FLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS----- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 176 lFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVL 255
Cdd:TIGR01974 211 -ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITAL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 256 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNMVF 335
Cdd:TIGR01974 290 FAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRK 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 336 MGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSW--LYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGhlniy 413
Cdd:TIGR01974 362 MGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG----- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 414 fqkysgkksssfysiklwgkEEQkminrnfrlfplltmkknekpyriggnvkkgalititnfgyKEAFSYPHESDNTMLF 493
Cdd:TIGR01974 437 --------------------KER-----------------------------------------HEADAHPHESPLVMLL 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 494 PMLILLLFTLFVGAIAIPFNQervdilskLLTPSINLLHQNSNDFEDSYQFLTNATFSVSIAcfGIFTAFLLYkpfyssL 573
Cdd:TIGR01974 456 PLIVLAVGSVFAGFFIVPLFE--------FLKGVLPTSAEPALEHHHVPALEIWSPTAVAIL--GILLAYLLY------L 519
|
570 580 590
....*....|....*....|....*....|....
gi 169957018 574 QNLNLLNSFAKRGPK--RILLDKiiyLIYDWSYN 605
Cdd:TIGR01974 520 GNPTLPAKIAQRHSGlyRLLLNK---WYFDELYD 550
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
400-611 |
1.25e-118 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 351.91 E-value: 1.25e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 400 RIYLLTFEGHLNIYFQKYSGKKSSSFYSIKLWGKEEQKMINRNFRLFPLLTMKKNE-------KPYRIGGNVKK--GALI 470
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEkvsffskKTYRIDGNVRNmtRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 471 TITNFGYKEAFSYPHESDNTMLFPMLILLLFTLFVGAIAIPFNQERV--DILSKLLTPSINLLHQNSNDFEDSYQFLTNA 548
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIdlDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169957018 549 TFSVSIACFGIFTAFLLYKPFYSSLQNLNLLNSFAKRGPKRILLDKIIYLIYDWSYNRGYIDT 611
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDV 223
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
15-426 |
1.99e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 349.31 E-value: 1.99e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 15 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS 94
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 95 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVp 174
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 175 flfvTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITV 254
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 255 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgySPEksQNMV 334
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV------SDE--QDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 335 FMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSW-LYSPIFAI-IAWSTAGLTAFYMFRIYLLTFEGHLNI 412
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 169957018 413 YFQKYSGKKSSSFY 426
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
15-406 |
5.52e-111 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 345.52 E-value: 5.52e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 15 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS 94
Cdd:MTH00020 52 FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 95 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnNLIYNNevP 174
Cdd:MTH00020 132 NYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVF----NMVVSA--P 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 175 FLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITV 254
Cdd:MTH00020 206 SSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 255 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNMV 334
Cdd:MTH00020 286 FFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMR 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169957018 335 FMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWL-YSPIFAI-IAWSTAGLTAFYMFRIYLLTF 406
Cdd:MTH00020 358 KMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
25-409 |
2.77e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 291.08 E-value: 2.77e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWE 104
Cdd:MTH00211 61 WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 105 LVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVPFLFvtlcasL 184
Cdd:MTH00211 141 GVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----ILNLDLTLFLL------G 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 185 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQ 264
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 265 KDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspeksQNMVFMGGLRKHVP 344
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNE--------QDIRKMGGLSKNLP 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 169957018 345 VTQIAFLVGTLSLCGIPPLACFWSKDEILSDswLYSPIFAIIAWSTA----GLTAFYMFRIYLLTFEGH 409
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGY 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
15-373 |
1.57e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 280.69 E-value: 1.57e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 15 INGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS 94
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 95 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDL------FEIFNNLI 168
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 169 YN---NEVPFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNL 245
Cdd:MTH00032 212 YGggaYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 246 ISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivg 324
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 169957018 325 yspeKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL 373
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
93-392 |
5.59e-84 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 264.56 E-value: 5.59e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 93 SSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNE 172
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 173 VPFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIG 250
Cdd:pfam00361 81 LLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 251 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgysp 327
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 328 EKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAG 392
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
2-406 |
3.07e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 267.99 E-value: 3.07e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 2 IVMIFSVDLSIQQINGSsiyqyVWSWTINNDFSFEFGYFIDSLtsimSILITTVGIFV----LIYSDNYMSHDQGYLRFF 77
Cdd:MTH00208 71 INLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSNDPNKNAFF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 78 AYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFef 157
Cdd:MTH00208 142 RLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW-- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 158 qDLFEIFnnLIYNNEVPFLFVTLCASLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 237
Cdd:MTH00208 220 -NLNEIL--SLNNSNSFLINILLFGILL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 238 VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 317
Cdd:MTH00208 295 NSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIH 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 318 SMeaivgyspEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFAIIAwstAG 392
Cdd:MTH00208 375 SL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALIA---TL 443
|
410
....*....|....
gi 169957018 393 LTAFYMFRIYLLTF 406
Cdd:MTH00208 444 LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
25-409 |
2.95e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 264.72 E-value: 2.95e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSWTINNDFSFEFGYFIDSLtsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIY 100
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 101 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnliYNNEVPFLfvtL 180
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF-------SPTQTPTL---P 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 181 CASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATL 260
Cdd:MTH00004 212 LLGLILA-ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 261 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNMVFMGGLR 340
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQ 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169957018 341 KHVPVTQIAFLVGTLSLCGIPPLACFWSKD---EILSDSWLYSPIFAIIAWSTAgLTAFYMFRIYLLTFEGH 409
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
25-401 |
7.70e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 263.69 E-value: 7.70e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSW-TINN---DFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNL 96
Cdd:MTH00066 64 FHWmNIFNfniNSSFKFDQY--------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 97 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVPFL 176
Cdd:MTH00066 136 FQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 177 FvtlcaSLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 256
Cdd:MTH00066 211 L-----GLILA-AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 257 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNMVFM 336
Cdd:MTH00066 285 TAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILS-------DSWlySPIFAIIAWStagLTAFYMFRI 401
Cdd:MTH00066 357 GGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIATS---FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
23-404 |
8.99e-80 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 267.17 E-value: 8.99e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 23 YVWSWTINNDFSFefgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 102
Cdd:PRK12647 48 YAWVPSLGVNLSF----LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 103 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEiFNNLIYNNEVpFLFVTLca 182
Cdd:PRK12647 124 WELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHPL-YLAILL-- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 183 sLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLAL 262
Cdd:PRK12647 200 -LVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 263 AQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspekSQNMVFMGGL 339
Cdd:PRK12647 279 RQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGL 349
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 340 RKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILsDSWLYSPIFAIIAWSTAGLTAFYMFRIYLL 404
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
10-408 |
1.91e-78 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 260.23 E-value: 1.91e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 10 LSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLG 89
Cdd:PRK07390 56 LALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 90 LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliy 169
Cdd:PRK07390 136 LALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA---- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 170 NNEVPFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLI 249
Cdd:PRK07390 212 TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVI 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 250 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspEK 329
Cdd:PRK07390 291 GTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TI 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 169957018 330 SQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 408
Cdd:PRK07390 362 TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
25-409 |
7.83e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 255.55 E-value: 7.83e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSW----TINNDFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNL 96
Cdd:MTH00108 66 WHWmtiqTLKLSLSFKLDYF--------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 97 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNliyNNEVPFL 176
Cdd:MTH00108 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPN---NSNLPLM 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 177 fvtlcaSLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 256
Cdd:MTH00108 215 ------GLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 257 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNMVFM 336
Cdd:MTH00108 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL-------SDSWLYSpiFAIIAWStagLTAFYMFRIYLLTFEGH 409
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWALL--ITLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
35-402 |
3.01e-75 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 246.60 E-value: 3.01e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 35 FEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 114
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 115 GFWFTRPAAAnACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFnnliynNEVPFLFVTLCASLLFAGAVAKSA 194
Cdd:COG0651 148 ALGGTKEALR-AGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 195 QFPLHVWLPDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGATLALAQKDIKRG 270
Cdd:COG0651 221 LFPLHFWLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 271 LAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQ 347
Cdd:COG0651 300 LAYSSVSQIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTA 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 348 IAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFAIiawsTAGLTAFYMFRIY 402
Cdd:COG0651 371 AAFLIGALALAGLPPLSGFVSKWLLLqaaleAGAWLLAAVLLL----SSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
25-401 |
2.53e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 249.36 E-value: 2.53e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSW----TINNDFSFEFGYFidsltsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNL 96
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 97 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLllgILGFYWI---TGSFEFQDLFEIFNNLiyNNEV 173
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKDF--DLTL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 174 PFLfvtlcaSLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIIT 253
Cdd:MTH00137 217 PLL------GLILA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALT 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 254 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspEKSQNM 333
Cdd:MTH00137 290 TLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169957018 334 VFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEI---LSDSWL--YSPIFAIIAWStagLTAFYMFRI 401
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
33-408 |
1.14e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 245.91 E-value: 1.14e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 33 FSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 112
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 113 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynNEVPFLFVTLcasLLFAGAVAK 192
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAMV---LVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 193 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLA 272
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 273 YSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspEKSQNMVFM 336
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILS-------------DSWLYspIFAIIAWSTAGLTAFYMFRIYL 403
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIH 448
|
....*
gi 169957018 404 LTFEG 408
Cdd:TIGR00940 449 GVFFG 453
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
37-409 |
1.88e-71 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 245.60 E-value: 1.88e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 37 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 115
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 116 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEifNNLIYNNEVPFLFVTLcasLLFAGAVAKSAQ 195
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIA--NADEIQNSPLFIPAMI---LILLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 196 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 275
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 276 MSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspekSQNMVFMGGL 339
Cdd:PRK12645 307 VSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 340 RKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILS-------------DSWLYspIFAIIAWSTAGLTAFYMFRIYLLTF 406
Cdd:PRK12645 378 MTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTF 455
|
...
gi 169957018 407 EGH 409
Cdd:PRK12645 456 FGK 458
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
37-386 |
2.38e-70 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 235.25 E-value: 2.38e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 37 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMS-------HDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMC 109
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 110 SYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnneVPFLFVtlcaslLFAgA 189
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLGI------LFA-A 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 190 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMnliSLIGIITVLLGATLALAQK 265
Cdd:PRK06525 218 WGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 266 DIKRGLAYSTMSQLGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeKSQNMVFMGGL 339
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGV 365
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 169957018 340 RKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 386
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
32-387 |
5.46e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 240.86 E-value: 5.46e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 32 DFSFefgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 111
Cdd:PRK12648 69 NLSL----RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 112 LLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNNevPFLFVTLCASLLfaGAVA 191
Cdd:PRK12648 145 LLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRAH--PLYPPALVLILL--GAFT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 192 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGL 271
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 272 AYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspeKSQNMVFMGGLRKHVPVTQI 348
Cdd:PRK12648 300 AYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITAT 370
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 169957018 349 AFLVGTLSLCGIPPLACFWSK----DEILSDSWLYS-----PIFAIIA 387
Cdd:PRK12648 371 LAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
36-370 |
1.82e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 237.42 E-value: 1.82e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 36 EFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 115
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 116 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLF---EIFNNLiynNEVPFLFVTLCasLLFAGAVAK 192
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILqdsELIENI---KGHPLFLITLI--LIFIGAAAK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 193 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLA 272
Cdd:PRK12649 228 SAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 273 YSTMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHsmEAivgyspeKSQNMVFMGGLRKHVPV 345
Cdd:PRK12649 308 YSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPI 378
|
330 340
....*....|....*....|....*
gi 169957018 346 TQIAFLVGTLSLCGIPPLACFWSKD 370
Cdd:PRK12649 379 TFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
23-369 |
1.96e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 236.74 E-value: 1.96e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 23 YVWSW--TINNDFSFEFgyfiDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYL-RFFAYMSLFNTSMLGLVTSSNLIQI 99
Cdd:PRK12644 56 EVVPWipSLGLDLAFRL----DALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 100 YIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnliyNNEVPFLFVT 179
Cdd:PRK12644 132 YVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 180 LCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGAT 259
Cdd:PRK12644 204 VAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGW 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 260 LALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyspekSQNMVFM 336
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKL 354
|
330 340 350
....*....|....*....|....*....|...
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSK 369
Cdd:PRK12644 355 SGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
25-412 |
5.08e-64 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 225.02 E-value: 5.08e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSWTINNDFSFEfgyfIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFW 103
Cdd:PRK12646 64 WMKTLDINLDLR----LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 104 ELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiyNNEVPFLFVTLCas 183
Cdd:PRK12646 140 ELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFM-- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 184 lLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALA 263
Cdd:PRK12646 216 -FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 264 QKDIKRGLAYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSmeaivgys 326
Cdd:PRK12646 295 QWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE-------- 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 327 pEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKD----------EILSDSWLYSPIFAIIAWSTAGLTAF 396
Cdd:PRK12646 367 -AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFT 445
|
410
....*....|....*.
gi 169957018 397 YMFRIYLLTFEGHLNI 412
Cdd:PRK12646 446 YALYMVKEVFWGKYDS 461
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
59-440 |
1.65e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 213.85 E-value: 1.65e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 59 VLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNRIGD 138
Cdd:MTH00165 70 VIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGD 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 139 FGLLLGIlGFYWITGSFEFQDLFEIFNNLIYNNEVPFLFVTlcasllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHA 218
Cdd:MTH00165 149 VAILLSI-AWMMNFGSWNFIFYLDFMKNSFEMLLIGLLIML--------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 219 ATMVAAGIFLVARLLPLFIvIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL 298
Cdd:MTH00165 220 STLVTAGVYLLIRFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 299 ITHAYSKALLFLGSGSIIHSMEAivgyspekSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKD---EILSD 375
Cdd:MTH00165 299 LTHALFKALLFLCAGSIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSM 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 376 SWLYSPIFAIIAWSTaGLTAFYMFRIYLltfeghlniyfqkYSGKKSSSFYSIKLWGKEEQKMIN 440
Cdd:MTH00165 371 SNLNFFIFFLFFFST-GLTVSYSFRLIY-------------YSMSGDFNLKSLNNLSDESKFMLK 421
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
23-426 |
1.20e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 203.15 E-value: 1.20e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 23 YVWSWTINN----DFSFEFgyFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQ 98
Cdd:MTH00151 32 LIFEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 99 IYIFWELVGMCSYLLIGFWFTRPAAANACQKAFvTNRIGDFGLLLGILGFYwITGSFEFQDLFEifnnliynnevpFLFV 178
Cdd:MTH00151 110 LLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLGHWSILSMWD------------FKLS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 179 TLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 258
Cdd:MTH00151 176 GWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 259 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspeksQNMVFMGG 338
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGT--------QDIRLLGS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 339 LRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILS---DSWLYSPIFAIIAWSTaGLTAFYMFRIYLLTFEGHLNIYFq 415
Cdd:MTH00151 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV-GLTALYSARLSFCLVWGSMKSSS- 405
|
410
....*....|.
gi 169957018 416 kYSGKKSSSFY 426
Cdd:MTH00151 406 -LSSKSDEDFY 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-412 |
1.01e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 200.64 E-value: 1.01e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 1 SIVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYM 80
Cdd:MTH00209 10 MLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 81 SLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWItGSFefqdl 160
Cdd:MTH00209 90 LLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMH-GNW----- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 161 feifnNLIYNNEVPFLFVTLCASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP 240
Cdd:MTH00209 163 -----NIFYLNFNSNLGSVISVLIVLA-AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 241 YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMe 320
Cdd:MTH00209 237 FFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSH- 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 321 aivgyspEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILsDSWLYS--PIFAIIAWSTA-GLTAFY 397
Cdd:MTH00209 316 -------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSLTAAY 387
|
410
....*....|....*
gi 169957018 398 MFRIYLLTFEGHLNI 412
Cdd:MTH00209 388 SMRLSYFSLWGPNSS 402
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
2-411 |
1.53e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 192.99 E-value: 1.53e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 2 IVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGylRFFAYMS 81
Cdd:COG1008 41 LTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 82 LFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWITGSFEFqD 159
Cdd:COG1008 119 LLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-D 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 160 LFEIFNNLIYNNEVPFLFvtlcASLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFi 237
Cdd:COG1008 195 IAELAAAPLPLTAQLLLF----LAFFIAFAV-KVPMFPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 238 viP----YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFL 310
Cdd:COG1008 268 --PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFL 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 311 GSGSIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWST 390
Cdd:COG1008 346 LVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALG 416
|
410 420
....*....|....*....|.
gi 169957018 391 AGLTAFYMFRIYLLTFEGHLN 411
Cdd:COG1008 417 LILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
36-399 |
2.61e-53 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 196.42 E-value: 2.61e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 36 EFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 115
Cdd:PRK12650 72 NLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 116 FwfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSfefQDLFEIFNNLIYNNEVPFLFVTlcASLLFAGAVAKSAQ 195
Cdd:PRK12650 152 R--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQ 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 196 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 275
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 276 MSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspeKSQNMVFMGGLRKHVPVTQIAFLV 352
Cdd:PRK12650 305 VSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTI 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 169957018 353 GTLSLCGIPPLACFWSKdEILSDSWLYSPIFAIIAW---STAGLTAFYMF 399
Cdd:PRK12650 376 AALSMAAVPPLFGFVSK-EGMLTAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
3-403 |
5.81e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 190.75 E-value: 5.81e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 3 VMIFSVDLSIQQINGSSIYQyvwsWTINNDFS--FEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYM 80
Cdd:MTH00207 19 ILMFPLSLYLMMCNKTILIE----WEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 81 SLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNRIGDFGLLLGIlgfywitGSFEFQDL 160
Cdd:MTH00207 95 LLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSI-------GWTLNQGH 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 161 FEIFNnLIYNNEVPFlfVTLCASLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP 240
Cdd:MTH00207 167 WSITN-MWQTDMNNY--IALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 241 YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMe 320
Cdd:MTH00207 241 WFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSH- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 321 aivgyspEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSwLYSP---IFAIIAWSTAGLTAFY 397
Cdd:MTH00207 320 -------HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESS-LFYPhnsLMILMIFLATALTAAY 391
|
....*.
gi 169957018 398 MFRIYL 403
Cdd:MTH00207 392 STRFTL 397
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-408 |
1.35e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 188.26 E-value: 1.35e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 18 SSIYQYVWSWTINNDFSFEFG---------YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSML 88
Cdd:PRK12667 48 LSILLFIQVYSSNKPIVYLFGgwpapigivYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGML 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 89 GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLI 168
Cdd:PRK12667 128 GILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 169 YNNEVPfLFVTLCASLLFAGAVA------KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL-------- 233
Cdd:PRK12667 208 FPLTGG-LAGNPPLALGVALALAlwaftiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgisp 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 234 PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFL 310
Cdd:PRK12667 286 SLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 311 GSGSIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKdEILSDSWLYS--PIFAIIAW 388
Cdd:PRK12667 366 ASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLL 435
|
410 420
....*....|....*....|
gi 169957018 389 STAGLTAFYMFRIYLLTFEG 408
Cdd:PRK12667 436 IASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
39-401 |
2.44e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 184.31 E-value: 2.44e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 39 YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGylRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 118
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 119 TRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliynnEVPFLFVTLcaSLLFAGAVAKSAQFPL 198
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 199 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 273
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 274 STMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAIVGyspekSQNMVFMGGLRKHVPVTQIAF 350
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAF 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 169957018 351 LVGTLSLCGIPPLACFWSKDEILS---DSWLYSPIFAIIAWSTagLTAFYMFRI 401
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVgavEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
41-408 |
5.02e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 181.45 E-value: 5.02e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 120
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 121 PAAANACQKAFVTNRIGDFGLLLGILGFYwitGSFEFQDLFEIFNNLIYNnevPFLFVTLCASLLFAGAVAKSAQFPLHV 200
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSEN---PTVVAKIALALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 201 WLPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIVIPYIMNL------ISLIGIITVLLGATLALAQKDIKRGLAY 273
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 274 STMSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeKSQNMVFMGG 338
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGG 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 339 LRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 408
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
24-401 |
6.56e-44 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 163.36 E-value: 6.56e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 24 VWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTS-MLGLVTSSNLIQIYIF 102
Cdd:COG1007 51 LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 103 WELVGMCSYLLIGFWFTRPAAANACQKAFVtnrIGDFG---LLLGILGFYWITGSFefqDLFEIFNNLIYNNEVPFLFVt 179
Cdd:COG1007 131 LELLSLSLYVLVAFRRDDRRSSEAALKYFL---LGALSsgfLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLL- 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 180 LCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPYIMNLISLIGIITVLL 256
Cdd:COG1007 204 LGLVLVLAGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 257 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPEKSQNM 333
Cdd:COG1007 283 GNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEI 354
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 169957018 334 VFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSW---LYspIFAIIAWSTAGLTAFYMFRI 401
Cdd:COG1007 355 EDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
41-408 |
2.74e-41 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 158.90 E-value: 2.74e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGY----LRFFayMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 116
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 117 WFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEifnnliyNNEVPFLfVTLCASLLFAGAVAKSAQF 196
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA-------AHLSPFW-ASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 197 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIP-----YIMnLIslIGIITVLLGATLALAQKDIKRG 270
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgVLV-LA--LGAISAVLGVLYALAEHDLKRL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 271 LAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspekSQNMVFM 336
Cdd:PRK06521 304 LAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL--------SDSWLYS---PIFAIIAWSTAGLTAFYMFRIYLLT 405
Cdd:PRK06521 375 GGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGIT 454
|
...
gi 169957018 406 FEG 408
Cdd:PRK06521 455 FLG 457
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
18-369 |
3.27e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 155.15 E-value: 3.27e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 18 SSIYQYVWSWTIN---------NDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLfnTSML 88
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 89 GLVTSSNLIQIYIFWELVGMCSYLLI--GFWFTRPAAAnacqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeIFNN 166
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMVpmGKKESRKASL----KYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 167 LIYNNEVPF-LFVTLcasLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP-------- 234
Cdd:PRK08668 186 LINDTSTGFaLIVFL---FLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsef 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 235 -LFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFL 310
Cdd:PRK08668 263 gTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFL 342
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 169957018 311 GSGSIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSK 369
Cdd:PRK08668 343 IFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
23-401 |
1.13e-39 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 151.51 E-value: 1.13e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 23 YVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMShDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 102
Cdd:PRK05777 53 LFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 103 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFE-IFNNLIYNNEVPFLFVTLC 181
Cdd:PRK05777 132 LELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKaLADGSGNSLLLLFGLVFLL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 182 ASLLFagavaKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPYIMNLISLIGIITVLLGA 258
Cdd:PRK05777 212 VGLAF-----KLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGN 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 259 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPEKSQnmvf 335
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD---- 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169957018 336 MGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDS------WLyspifAIIAWSTAGLTAFYMFRI 401
Cdd:PRK05777 358 FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-411 |
1.78e-38 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 148.43 E-value: 1.78e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 2 IVMIFSVDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGylrffAYMS 81
Cdd:PRK05846 41 LTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVK-----FYMA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 82 LF---NTSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWI--- 151
Cdd:PRK05846 116 ALlwlEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyyn 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 152 -TGSFEFQDLfeifnnliYNNEVP-----FLFVtlcaSLLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 225
Cdd:PRK05846 191 aTGTFDIADL--------LNLPLPpgvqyWLFL----AFFIAFAV-KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMG 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 226 IF-LVARLLPLFIVIP-YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLIT 300
Cdd:PRK05846 258 AYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMIS 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 301 HAYSKALLFLGSGSIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYS 380
Cdd:PRK05846 338 HGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVN 408
|
410 420 430
....*....|....*....|....*....|.
gi 169957018 381 PIFAIIAWSTAGLTAFYMFRIYLLTFEGHLN 411
Cdd:PRK05846 409 PVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
42-316 |
2.17e-38 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 148.69 E-value: 2.17e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 42 DSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 121
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 122 AAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfnnliYNNEVPFLFVTLCASLLFAGAVAKSAQFPLHVW 201
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 202 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 281
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|....*
gi 169957018 282 MMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 316
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
21-408 |
2.86e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 142.00 E-value: 2.86e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 21 YQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYlrFFAYMSLFNTSMLGLVTSSNLIQIY 100
Cdd:TIGR01972 55 FQFTEDIPWIPALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 101 IFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITG-SFefqDLFEIFNNLIYNNEVPFLFVt 179
Cdd:TIGR01972 133 VFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 180 lcaSLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLFiviP----YIMNLISLIGIITV 254
Cdd:TIGR01972 208 ---AFFIAFAV-KVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAI 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 255 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPEKSQ 331
Cdd:TIGR01972 281 IYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTR 351
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169957018 332 NMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 408
Cdd:TIGR01972 352 DIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
33-406 |
4.54e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 141.98 E-value: 4.54e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 33 FSFEFGYFIDSLtsIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 112
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 113 LIGF---WFTRPAAANAcqkaFVTNRIGDFGLLLGILGFywitgsfefqdlfeIFNNLIYNNEVPFLFVTLCasLLFAGA 189
Cdd:MTH00095 115 LVLFynnWDSNSGAMNT----ALTNRIGDFFIFLFFSGF--------------IFSSYYFFSFSFFSSSMIL--MLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 190 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpYIMNLISLIGIITVLLGATLALAQKDIKR 269
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 270 GLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgYSPEKSQNMVFMGGLRKHVpvtQIA 349
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN-----FGQQDGRNYSNNGNLPMFI---QLQ 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 169957018 350 FLVGTLSLCGIPPLACFWSKDEILSDSWL--YSPIFAIIAWSTAGLTAFYMFRIYLLTF 406
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
35-369 |
7.86e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 142.95 E-value: 7.86e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 35 FEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLR---FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 111
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 112 LLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynnEVPFLFVTLCASLLFAGAVA 191
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 192 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRG 270
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 271 LAYSTMSQLGYMMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeKSQNMVFM 336
Cdd:PRK08667 298 LAYSSIENIGIILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKM 368
|
330 340 350
....*....|....*....|....*....|...
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSK 369
Cdd:PRK08667 369 GGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-401 |
2.11e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 136.48 E-value: 2.11e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 27 WTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHD--QGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWE 104
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 105 LVGMCSYLLIGFwfTRPAAANAcqkafvtnrigdfgLLLGILGFYWITGSFEFQD----LFEIFNNLIYNNEVPFLFVTL 180
Cdd:PRK06589 147 LLTISTAFLIGH--TRNNISLS--------------GGYKYLKILMISALLLFLPavilIYTKTGNLDFVSGGLFSKNQS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 181 CASLL-FAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM------NLISLIGIIT 253
Cdd:PRK06589 211 IILLLmFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 254 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPEKS 330
Cdd:PRK06589 291 IFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKE 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169957018 331 QNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFAIIAWSTAGLTAFYMFRI 401
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-408 |
1.05e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 131.23 E-value: 1.05e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 34 SFEFGYFIDSLTSIMSILITTVGIFVLIYSdnyMSHDQGylRFFAYMSLFNTSMLGLV-TSSNLIQIYIFWELVGMCSYL 112
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVIFYC---WESAKT--RFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 113 LIGFWFTRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDLfeifnnliyNNEVPFLFvtlcaSLLFAGAVAK 192
Cdd:PRK07234 133 LVAYPRTDRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGL---------ATADPEAF-----ALIALGLLVK 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 193 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLplfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLA 272
Cdd:PRK07234 198 GGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 273 YSTMSQLGYMMLALGMGsyraALFHLiTHAYSKALLFLGSGsiihsmeAIVGYSPEKSQNMVFMGGLRkhvpvtqIAFLV 352
Cdd:PRK07234 275 FSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-------ALPSRNFTELISQMLGIGKW-------IPLTM 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 169957018 353 GTLSLCGIPPLACFWSKDEILSDswlYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 408
Cdd:PRK07234 336 ASFSIAGFPLLAGFVSKVLTLKN---LLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
40-385 |
9.53e-32 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 128.89 E-value: 9.53e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 40 FIDSLTSIMSILITTVGIFVLIYSDNYMSHDQ-------GYLRFFAYM-SLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 111
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 112 LLIGFWFTRpAAANACQKAFVTNRIG-DFGLLLGILGFYWITGSFEFQDLFEIFNNLI-YNNEVPFLFVTLCASLLFAGA 189
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 190 VAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVIPYIM------------NLISLIGIITV 254
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIFGLLSV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 255 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeKSQ 331
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTR 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 169957018 332 NMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDS-----WLYSPIFAI 385
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILLLL 422
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
79-373 |
1.59e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 128.35 E-value: 1.59e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 79 YMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 155
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 156 EFQDLFEIFNNLIynnevPFLFVTLCASLLFAGAVaKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLP 234
Cdd:PRK08377 189 NMAHIAQLAGTID-----PTVAQVGLALLIFGLAV-EAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 235 LFIVIP---YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALL 308
Cdd:PRK08377 262 LMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 309 FLGSGSIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL 373
Cdd:PRK08377 342 FLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
24-425 |
5.17e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 120.44 E-value: 5.17e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 24 VWSWTINNDFSFEFgYFIDSLTSIMSILITTVGIFVLIYSDNYMShdQGYLRFFAYMSLFNTSMLG---LVTSSNLIQIY 100
Cdd:TIGR01770 52 TLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLS--KEKINKFEFYILLLFALLGiflLVSSNDLLSIY 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 101 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevPFLFvtL 180
Cdd:TIGR01770 129 LGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLL--L 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 181 CASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 258
Cdd:TIGR01770 205 GIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGN 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 259 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgSIIHSMEAivgYSPEKSQNMVF 335
Cdd:TIGR01770 285 FGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 336 MGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL-----SDSWLYSPIFAIiawsTAGLTAFYMFRIYLLTFEGHL 410
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRVVKVMYFDKP 433
|
410
....*....|....*
gi 169957018 411 NIYFQKYSGKKSSSF 425
Cdd:TIGR01770 434 ERRIPSNPQSKAQSL 448
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
41-374 |
2.73e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 119.61 E-value: 2.73e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSdnYMSHDQG-YLRFFAYMSlfntSMLGLVTSSNLIQIYIFWELVGMCSYLLIgfWFT 119
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--WAR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 120 R-PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNnliynnevpflfvTLCASLLFAGAVAKSAQFPL 198
Cdd:PRK12668 137 GtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 199 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYImnlisliGIITVLLGATLALAQKDIKRGLAYSTMSQ 278
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRLLSYHIVSQ 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 279 LGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpeksqNMVFMGGLRKHVPVTQIAFLVGTL 355
Cdd:PRK12668 276 VGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGAL 346
|
330
....*....|....*....
gi 169957018 356 SLCGIPPLACFWSKDEILS 374
Cdd:PRK12668 347 SISAFPLFSGFVSKSMIIS 365
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
41-338 |
3.59e-28 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 118.60 E-value: 3.59e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSlFNTSMLGLVTSSNLIQIY-IFWELVGMCSYLLIG---F 116
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFT-FTTGFASLAWLSGDLRLMaLCWGATLLGLTLLIGlnkG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 117 WftRPAAANACQKAFVTNrIGDFGLLLGILGFYWITGSFEfqdlfeIFNNLIYNNEVPF-LFVTLCASLLFAGAV-AKSA 194
Cdd:PRK08601 149 W--KVAREAAKISGMLFL-ISWLALALAIVWLFIATGEWQ------LTSVLSNENLAQLgTWEKTGINLLLILAVmIPAA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 195 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPYIMNLIslIGIITVLLGATLALAQKDIKRGLAY 273
Cdd:PRK08601 220 QWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVG 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 274 STMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaIVGYSPEKSQNMVFMGG 338
Cdd:PRK08601 297 STMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
42-413 |
8.08e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 111.19 E-value: 8.08e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 42 DSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 121
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 122 AAANACqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVpflFVTLCASLLFAGAVAKSAQFPLHVW 201
Cdd:PRK07691 156 QLRESI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 202 LPDAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 278
Cdd:PRK07691 232 LPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 279 LGYMMLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPEKSqnmvfMGGLRKHVPVTQIAFLVGTL 355
Cdd:PRK07691 311 VGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAAL 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 169957018 356 SLCGIPPLACFWSKDEILSDSWLY-SPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIY 413
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGY 440
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
25-406 |
1.32e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 107.66 E-value: 1.32e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 25 WSWTIN----NDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIY 100
Cdd:MTH00063 23 SSVSLNflsfGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 101 IFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnliynnevpFLFVTL 180
Cdd:MTH00063 103 IFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCLF-------------FFLIVF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 181 casllfagavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPYIMNLISLIGIITVLLGATL 260
Cdd:MTH00063 169 ----------TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSIFFSVLLLLTIFITGVS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 261 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaIVGYSPEKSQNMVFMGGLR 340
Cdd:MTH00063 238 SLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV------MSGSGGSQSSNCVYSSILY 311
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169957018 341 KHVPVTQIAFLVgtLSLCGIPPLACFWSKDEILSD--SWLYSPIFAIIAWSTAGLTAFYMFRIYLLTF 406
Cdd:MTH00063 312 GSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFLSYLYSFRLCLILF 377
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
42-406 |
1.34e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 107.73 E-value: 1.34e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 42 DSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 121
Cdd:PRK12663 76 DSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 122 AAANACQKAFVtNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVPFLfvtlcASLLFAGAVAKSAQFPLHvW 201
Cdd:PRK12663 156 QLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTI-----ALLFLLAFGMKAALFPFM-W 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 202 LPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPYIMN-LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 278
Cdd:PRK12663 229 LPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 279 LGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPEKSqnmvfMGGLRKHVPVTQIAFLVGTL 355
Cdd:PRK12663 308 IGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLILIF 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 169957018 356 SLCGIPPLACFWSKDEILS---DSWLYspIFAIIAWSTAGLTAFYMFRIYLLTF 406
Cdd:PRK12663 379 AIGGLPPFSGFWGKVLLVQgalDNGAY--ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
41-401 |
7.47e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 105.20 E-value: 7.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSdNYMSHDQ----GYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 116
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 117 WFTRPAAANACQkAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNN--EVPFLFVTLcasllfaGAVAKSA 194
Cdd:PRK12662 153 GRDKKALVAAFE-YLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRaiQIGVLFIMV-------GLFIKAA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 195 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPYIMNLISLIGIITVLLGATLALAQKDI 267
Cdd:PRK12662 225 LFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 268 KRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEaivgyspekSQNMVFMGGLRKHVP 344
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMP 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 345 VTQIAFLVGTLSLCGIPPLACFWSKDEILS---DSWLYSPIFAIIAWStaGLTAFYMFRI 401
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-430 |
2.84e-20 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 94.30 E-value: 2.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 1 SIVMIFSVDLSIQQINGS------------SIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMS 68
Cdd:CHL00049 25 GLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 69 HDQGYLRFFayMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwftrpaaanaCQKAFVTNRIGDFGLLLG- 144
Cdd:CHL00049 105 CTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGg 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 145 ----IL--GFYWITGSF--EFQdLFEIFNNLIYNNEVPFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISAL 215
Cdd:CHL00049 173 asssILvyGFSWLYGLSggEIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAF 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 216 IhAATMVAAGIFLVARLLPlfIVIPYIMN----LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 291
Cdd:CHL00049 252 L-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDS 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 292 RAALFHLITHAYSKALLFLGSGSIIHSMEAIVGyspekSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDE 371
Cdd:CHL00049 329 NDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLY 403
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 372 ILSDSW---LYSPIFaiIAWSTAGLTAFYMFRIYLLTFEGH---LNIYFQKYSGKKSSSFYSIKL 430
Cdd:CHL00049 404 LFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
76-397 |
5.01e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 93.61 E-value: 5.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 76 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 155
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 156 EFQdlfeiFNNLIYNNeVPFLFVTLCASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-L 233
Cdd:PRK06473 188 SFD-----YEPLRSHT-LPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 234 PLFI-VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLF 309
Cdd:PRK06473 261 GLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLF 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 310 LGSGsiihsmeaiVGYSPEKSQNMVFMGGL---RKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 386
Cdd:PRK06473 341 LLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLL 411
|
330
....*....|.
gi 169957018 387 AWSTAGLTAFY 397
Cdd:PRK06473 412 CMIGTGLTAVY 422
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
142-406 |
7.85e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 93.11 E-value: 7.85e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 142 LLGILGFYWITGSFEFQDLFEIFNNLiynneVPFLFVTLCASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAAT 220
Cdd:PRK12665 178 LIGIALVYAATGTLNMADLAVRLDEL-----PSGTRTALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 221 MVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFH 297
Cdd:PRK12665 251 LTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYY 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 298 LITHAYSKALLFLGSGSIihsmEAIVGyspekSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEIL---- 373
Cdd:PRK12665 331 VAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeaga 401
|
250 260 270
....*....|....*....|....*....|....*.
gi 169957018 374 -SDSWLyspIFAIIAWS--TAGLTAFYMFRIYLLTF 406
Cdd:PRK12665 402 eDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-403 |
2.80e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 91.31 E-value: 2.80e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLtSIMSILITTVGIFVLIYSDNYMSHDQGYlrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 120
Cdd:PRK07363 77 VDGL-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 121 PAAAnACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVPFLfvtlcaSLLFAGAVAKSAQFPLHV 200
Cdd:PRK07363 154 KRGY-ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 201 WLPDAMEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPYIMNLIS----LIGIITVLLGATLALAQKDIKRGLAYST 275
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 276 MSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyspekSQNMVFMGGLRKHV---PVTQIA 349
Cdd:PRK07363 304 IGHMGYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSAL 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 169957018 350 FLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYmFRIYL 403
Cdd:PRK07363 375 LVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
86-386 |
8.73e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 88.55 E-value: 8.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 86 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFN 165
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 166 NLIYNNE--VPFLFVTLCASLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPYI 242
Cdd:MTH00196 85 SGQSFSSvsVPIGYLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 243 MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihsm 319
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169957018 320 eAIVGYSPEKSQnMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 386
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFL 287
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
41-408 |
2.07e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 89.12 E-value: 2.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQ----GYLrffayMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGf 116
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 117 wftrpaaanaCQKA----FVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVPFLFVTLCAslLFAGAVak 192
Cdd:PRK08042 132 ----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFG--LLAGII-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 193 saqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIpyimnLISLIGIITVLLGATLALAQKD 266
Cdd:PRK08042 198 ----PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 267 IKRGLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGYspeksQN 332
Cdd:PRK08042 269 IQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RD 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 333 MVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEI------LSDSWLY-----SPIFAIIAWSTAGLTAFYMFRI 401
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKV 419
|
....*..
gi 169957018 402 YLLTFEG 408
Cdd:PRK08042 420 YGVTFLG 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
39-381 |
7.71e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 86.73 E-value: 7.71e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 39 YFIDSLtSIMSILITTVG-IFVLIYSDNYMSH-------DQGYLR-FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMC 109
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 110 SYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLlGILGFYWIT------GSFEFQDLfeifnnLIYNNEVPFLFVTLCAS 183
Cdd:PRK08676 138 SAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLGASFL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 184 LLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGAT 259
Cdd:PRK08676 211 FIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAF 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 260 LALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPEKSQNmvfM 336
Cdd:PRK08676 290 SMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---I 360
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSP 381
Cdd:PRK08676 361 FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISV 405
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
76-387 |
1.90e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 85.47 E-value: 1.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 76 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWITG 153
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 154 SFEFqDLFEIfnnliYNNEVPFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV-- 229
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmg 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 230 --------ARLLPLFIVipYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALF 296
Cdd:PRK12561 232 gyalirfnVQMLPDAHV--YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAML 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 297 HLITHAYSKALLFLGSGsiihsmeaiVGYSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEI---L 373
Cdd:PRK12561 308 QMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgI 378
|
330
....*....|....
gi 169957018 374 SDSWLYSPIFAIIA 387
Cdd:PRK12561 379 TSSDVYSSTFRTIT 392
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
41-433 |
7.54e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 83.53 E-value: 7.54e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 41 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 120
Cdd:MTH00199 64 TNSWIIISKIIIIIGSISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 121 PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeifNNLIYNNEVPFLFVTLcaSLLFAGAVAksaqfPLHV 200
Cdd:MTH00199 144 AYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQG-----INSILTGDVGKILITI--SLLFKLSAA-----PFHM 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 201 WLPDAMEG-PTPISALIhaATMVAAGIFlvarllPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 279
Cdd:MTH00199 212 WAPDVYEGaPTITTALL--ATVPKIGVF------SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHM 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 280 GYMMLALGMGSY---RAALFHLITHayskALLFLGSGSIIHSMEAIVGYspeksqnMVFMGGLRKHVPVTQIAFLVGTLS 356
Cdd:MTH00199 284 GFILFGVAIGSFesiQASLIYMIIY----VIMSICSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLS 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 357 LCGIPPLACFWSKDEIL-----SDSWLYSpIFAIIAWSTAGLtaFYMFRIYLltfeghlnIYFQkysgkkssSFYSIKLW 431
Cdd:MTH00199 353 IAGIPPLAGFLSKWLILlsgvsSGYYLIC-IIAVLSSVIAGV--YYVRVVQI--------IYFQ--------ADYSILIW 413
|
..
gi 169957018 432 GK 433
Cdd:MTH00199 414 QK 415
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
17-369 |
8.45e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 83.56 E-value: 8.45e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 17 GSSIYQYVWSWTINNDFSFeFGYFI-DSLTSIMSILITTVGIFVLIYSDNYMshDQGYLRFFAYMSLFNTSMLG---LVT 92
Cdd:PRK02504 52 GAALVALALQWDNPNPISF-LGSFNaDNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSG 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 93 SSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefQDLFEIFNNLIyNNE 172
Cdd:PRK02504 129 ATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS--TQLSAIALALI-TSP 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 173 VPFLFVTLCasLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPYIMN----LIS 247
Cdd:PRK02504 206 SLGLALALV--FVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFDEqwklLFT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 248 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITH------AYSKALLF-LGSGSiih 317
Cdd:PRK02504 281 ALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT--- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 169957018 318 smEAIVGYSpeksqnmvfmgGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSK 369
Cdd:PRK02504 358 --DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
39-369 |
4.10e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 81.23 E-value: 4.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 39 YFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLrFFAYMSLfnTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 118
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 119 TRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDlfeIFNNLIYNNEVPFLFVTLcaSLLFAGAVAKSAQFPL 198
Cdd:PRK06277 145 TEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITD---IHNALLVNPTSPVIYGGL--LLLIFGLLYGSGLPPF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 199 HVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYS 274
Cdd:PRK06277 219 HTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 275 TMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPEKSQNMVFMGGLRKHVPVTQIAFL 351
Cdd:PRK06277 298 AISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
330
....*....|....*...
gi 169957018 352 VGTLSLCGIPPLACFWSK 369
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
27-77 |
6.08e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 63.22 E-value: 6.08e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 169957018 27 WTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFF 77
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-399 |
9.94e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 67.64 E-value: 9.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 95 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNNEVP 174
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 175 FLFVTlcaslLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIGII 252
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 253 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPEK 329
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 330 SQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMF 399
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
46-315 |
2.33e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 66.74 E-value: 2.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 46 SIMSILITTVGIFVLIYSDNYmSHDQGYLrffayMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWftrpa 122
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWL-----SSLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIALT----- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 123 aANACQKAFVTNRIGDFGLLLGILGFYW---ITGSFEFQDLFEIfnnliynneVPFLFVTLcasllfaGAVAKSAQFPLH 199
Cdd:PRK06459 116 -KKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFSYLPSP---------VPLILASF-------GFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 200 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--YIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 275
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 169957018 276 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 315
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
76-309 |
7.84e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 64.73 E-value: 7.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 76 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGI-LGFYWITGS 154
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 155 FEFQDLfeifnnliYNNEVPFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV---- 229
Cdd:PRK02546 197 FDMTAL--------AAKDFGLGFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggy 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 230 ------ARLLPlfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALFHL 298
Cdd:PRK02546 262 allrmnAGMLP--DAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQM 337
|
250
....*....|.
gi 169957018 299 ITHAYSKALLF 309
Cdd:PRK02546 338 ISHGLIGASLF 348
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
26-361 |
1.01e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 64.31 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 26 SWTINNDFSFEFGYFIDSLTSI------MSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLfntsmLGLVTSSNLIQI 99
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLL-----IGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 100 YIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfnnliynnEVPFLFVT 179
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--------KLPLSIQK 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 180 LCASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-YIMNLISLIGIITVLLG 257
Cdd:MTH00204 210 WLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 258 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPEKSQNMV 334
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIK 360
|
330 340
....*....|....*....|....*..
gi 169957018 335 FMGGLRKHVPVTQIAFLVGTLSLCGIP 361
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-397 |
1.17e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 64.10 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 184 LLFAGAV-------AKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------IVIPYIMNLISLI 249
Cdd:PRK12666 208 LLEAGAAlllvvflIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 250 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSI 315
Cdd:PRK12666 286 GLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 316 IHSMEAivgYSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILS---------DSWLY------S 380
Cdd:PRK12666 366 AVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllS 442
|
250
....*....|....*..
gi 169957018 381 PIFAIIAWSTAGLTAFY 397
Cdd:PRK12666 443 GLAALIALTRAGIRLFW 459
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
175-401 |
2.16e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 63.34 E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 175 FLFVTLcaSLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfivipyIMNLISLIGIIT 253
Cdd:MTH00198 302 YLFITV--AILFKLAAA-----PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 254 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPEKSQNM 333
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 334 VFMGG---LRKHVPVT-------QIAFLVGT--LSLCGIPPLACFWSKDEILSDS----WLYS-PIF---AIIAWSTAGL 393
Cdd:MTH00198 446 GSFGNynlVRRLVDLTilsrgqpYIAFSLAIvfLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCI 525
|
....*...
gi 169957018 394 TAFYMFRI 401
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
37-418 |
2.54e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.57 E-value: 2.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 37 FGYFIDSLTSIMSILITTVGIFVLIYSDNYMsHDQGYLRFFAYMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLL 113
Cdd:MTH00206 53 LYLSYDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 114 IGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVPFLFVTLcasllfaGAVAKS 193
Cdd:MTH00206 132 ITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 194 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIVIPYIMNLISLIGIITVLLGATLA----LAQK 265
Cdd:MTH00206 204 PLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 266 DIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPEKSQNMVFMGGLRK 341
Cdd:MTH00206 277 DLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQM 346
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169957018 342 HVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIYFQKYS 418
Cdd:MTH00206 347 ILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
87-311 |
6.74e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 58.52 E-value: 6.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 87 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnN 166
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 167 LIYNNEVP-FLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIM 243
Cdd:MTH00217 198 LKIEKELQyFIFL-----GFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 169957018 244 NLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLG 311
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIA 343
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
175-431 |
2.37e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.05 E-value: 2.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 175 FLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMnlisLIGIITV 254
Cdd:MTH00144 80 LSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLSA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 255 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALgMGSYRAALFHLITHAYSKALLFLGSGSiihsmeaivgyspeKSQNMV 334
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAI-LHGSWLMWMYFLIYIVSSGFLFFSLWS--------------GDSGSM 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 335 FMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTA--FYMFRIYLLTfeghLNI 412
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF----LSS 296
|
250
....*....|....*....
gi 169957018 413 YFQKYSGKKSSSFYSIKLW 431
Cdd:MTH00144 297 SKSKKSNSSKVLNSSIISL 315
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
82-313 |
2.95e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 56.49 E-value: 2.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 82 LFNTSML-------GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTnRIGDFGLLLGIL--GFYwit 152
Cdd:CHL00011 113 LFYFLMLamysgqiGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY--- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 153 GSFEFQDLFEIFNNLIYNNEVPFLFVTlcaSLLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA- 230
Cdd:CHL00011 189 GSNEPTLNFETLANQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMg 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 231 ---------RLLP--LFIVIPYIMnlisLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RAA 294
Cdd:CHL00011 258 ayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGA 331
|
250
....*....|....*....
gi 169957018 295 LFHLITHAYSKALLFLGSG 313
Cdd:CHL00011 332 ILQIISHGFIGAALFFLAG 350
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
39-284 |
7.45e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 55.17 E-value: 7.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 39 YFIDSLTSIMSILITTVGIFVLIYSDN--------YMSHDQGYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCS 110
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 111 YLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevpflFVTLCASLLFAGAV 190
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEHTNSR-----IITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 191 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFIVIPY------IMNLISLIGIITVLLGATLALAQ 264
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 169957018 265 KDIKRGLAYSTMSQLGYMML 284
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
40-309 |
2.42e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 53.59 E-value: 2.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 40 FIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 119
Cdd:MTH00014 56 SSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGY 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 120 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeifnnLIYNNEVPFLFVT-LCASLLFAGAVAKSAQFPL 198
Cdd:MTH00014 136 QPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSM---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 199 HVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFiviPYIMNLISLIGIITVLLGATLA----LAQKDI 267
Cdd:MTH00014 207 HLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDL 276
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 169957018 268 KRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLF 309
Cdd:MTH00014 277 KSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLCSSALF 321
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
91-401 |
1.38e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.74 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 91 VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliyn 170
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLS----- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 171 nevpflfvtlcASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIvipyiMNLISLIG 250
Cdd:MTH00200 95 -----------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-----SNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 251 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaivgYSPEKS 330
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169957018 331 QNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYS-PIFAIIAWSTAGLTAFYMFRI 401
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
24-410 |
1.76e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 50.69 E-value: 1.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 24 VWSWTINNDFSFEFGYF-IDSLTSIMSILITTVGIFVLIYSDNYMSHD-QGYLRFFAYMSLF-NTSMLGLVTSSNLIQIY 100
Cdd:MTH00068 40 MWFNLPSETMNFTNKYFgIDQISSPLLILTCWLLPLMILASQNHLKNEpINRQRTYISMLIIlQLTLILAFSATELILFY 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 101 IFWELVGMCSYLLIGFWFTRPAAANACQK-AFVTnRIGDFGLLLGILGFYWITGSFEFQdLFEIFNNLIYNNEVPFLFVT 179
Cdd:MTH00068 120 IFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSLI-LLELMSPMQLMTYTNKIWWL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 180 LCaslLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLL-PLFIVIPYIMNLISL 248
Cdd:MTH00068 198 AC---LLAFMV-KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKELSYPFIILAL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 249 IGiitVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeAIVG 324
Cdd:MTH00068 267 WG---VLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------ANTN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 325 YSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLL 404
Cdd:MTH00068 334 YERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLM 413
|
....*.
gi 169957018 405 TFEGHL 410
Cdd:MTH00068 414 TQRGPL 419
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
197-366 |
2.20e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 50.21 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 197 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPYI-MNLISLIGIITVLLGATLALAQKDIKRGLAYST 275
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 276 MSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMeaivgyspeKSQNMVFMGGLRKHVPVTQIAFLVGTL 355
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLL 249
|
170
....*....|.
gi 169957018 356 SLCGIPPLACF 366
Cdd:MTH00112 250 SLAGLPPLTGF 260
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
96-410 |
5.75e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 49.18 E-value: 5.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 96 LIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeifnnLIYNNEVPF 175
Cdd:MTH00127 116 IIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSM---------LTLQYSQPL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 176 LFVTLCASLLFAGAV----AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMNLIS 247
Cdd:MTH00127 187 QLSSWADKLWWAGCLlaflVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 248 LIGIItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVG 324
Cdd:MTH00127 267 LWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFC---------LANTN 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 325 YSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLL 404
Cdd:MTH00127 335 YERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLM 414
|
....*.
gi 169957018 405 TFEGHL 410
Cdd:MTH00127 415 TQRGPL 420
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
21-427 |
1.32e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 47.91 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 21 YQYVWSWTINNDFsfefgYFIDSLTSIMSILITTVGIFVLIYSdnymshdQGYLRFFAYMSLFNTSMLGLV-------TS 93
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 94 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeIFNNLIYNNEV 173
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 174 PFLFVTLCASLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPYIMNLI 246
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 247 SL-IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAI 322
Cdd:MTH00150 220 LIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 323 VGYSPEKSQ--NMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFR 400
Cdd:MTH00150 289 ANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLY 368
|
410 420
....*....|....*....|....*..
gi 169957018 401 IYLLTFEGHLNIYFQKYSGKKSSSFYS 427
Cdd:MTH00150 369 LYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
34-309 |
2.67e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 46.90 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 34 SFEFGYFIDSLTSIMsILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS-NLIQIYIFWELVGMCSYL 112
Cdd:MTH00205 48 FISSSFSFDSLSLPL-IMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVdNLLLFYITFEASLIPTLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 113 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevpflfvTLCASLLFAGAVaK 192
Cdd:MTH00205 127 LILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-K 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 193 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPYIMNLISLIGIITVLLGATLALAQ 264
Cdd:MTH00205 199 LPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQ 271
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 169957018 265 KDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLF 309
Cdd:MTH00205 272 VDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLCSSGMF 319
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
160-430 |
3.22e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 46.20 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 160 LFEIFNNLIYNNEVPFLFVTLcasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVI 239
Cdd:MTH00197 63 LLLMGGSLSFSNLYLSLLSVV---LVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILA 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 240 PYIMNLISLI--GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 317
Cdd:MTH00197 131 FNSSSFMGLLicSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 318 SMEAIVGYSPEKSQNMVFmgglrkhvpvtqiaFLVGTLSLCGIPPLACFWSKDEILSD--SWLYSPIFAIIAWSTAgLTA 395
Cdd:MTH00197 211 SLNQQYSNPESMSSNLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSL 275
|
250 260 270
....*....|....*....|....*....|....*
gi 169957018 396 FYMFRIYLLTFeghLNIYFQKYSGKKSSSFYSIKL 430
Cdd:MTH00197 276 YYYLSLAYKSL---ILSNWMINFLMKINLLYSGLF 307
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-386 |
6.67e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.88 E-value: 6.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 177 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipYIMNLISLIGIITVLL 256
Cdd:PRK12664 142 YTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGIITAIY 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 257 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspeksq 331
Cdd:PRK12664 215 GIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF--------- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 169957018 332 NMVFMGGLRKhVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAII 386
Cdd:PRK12664 286 NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
86-431 |
7.07e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.31 E-value: 7.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 86 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeifn 165
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI-------- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 166 nLIYNNEVPFLFVTLCASLlfagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI--- 242
Cdd:MTH00041 87 -NGPLNTLSSIIITLALAL-------KLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPLILLISISnll 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 243 -MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEA 321
Cdd:MTH00041 150 nSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSH 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 322 IvgyspeksqnmvfmGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSK-----DEILSDSWLYSPIFAIIAWstagLTAF 396
Cdd:MTH00041 230 L--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILIIGSL----LSLF 291
|
330 340 350
....*....|....*....|....*....|....*....
gi 169957018 397 YMFRI----YLLTFEGHLNIYFQKYSgKKSSSFYSIKLW 431
Cdd:MTH00041 292 FYLRIsfntSLTLFPQHSISLFSWRN-SGNITVYGVILS 329
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
182-401 |
1.57e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.00 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 182 ASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipYIMNLISLIGIITVLLGATLA 261
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 262 LAQKDIKRGLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAIVGYSPEKSQNmvFMGGLR 340
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTK--FNSKIS 230
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169957018 341 KHVPVTQIAFLVGTLSLCGIPPLACF---WSKDEILSDSWLYSPIFAIIAWSTAGLtaFYMFRI 401
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
24-429 |
4.13e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 42.97 E-value: 4.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 24 VWSWTINNDFSFEFGYFI-DSLTSIMSILIttvgiFVLIYSDNYMSHDQGYLRFFAYMSLFntSMLGLVTSSNLIQIYIF 102
Cdd:MTH00094 18 FFSFLMFNNYSWSGLFFFfDSFVFVLLIFM-----MVFILGLVLLSEKNFNLLILSNLLIL--ICLLFFVSSNMLMLYMF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 103 WELVGMCSYLLIGFWFTRPAAANACQkafvtnrigdfglllgILGFYWITGSFEFqdLFEIFNNLIYNNEVPFLFVT--L 180
Cdd:MTH00094 91 FELSMFPILIMILGYGSQIEKINSSY----------------YLLFYAAFFSFPF--LFVYLKNFFFFSLCYFDFFLswE 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 181 CASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFIVIpyIMNLISLIGIITVLLGAT 259
Cdd:MTH00094 153 MFFILSLSFMMKFPVYFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLRILGSLNFV--YNNFWIIFSLLGMILSSF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 260 LALAQKDIKRGLAYST---MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspeKSQNMVFM 336
Cdd:MTH00094 230 CCVFQSDSKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS---------KSRLIYFM 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 337 GGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFaiiawstagltAFYMFRIYLLTFEGHLNIYFQK 416
Cdd:MTH00094 301 NSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFS-----------FFFIFFYFLVSFYYSLFLIVSS 369
|
410
....*....|...
gi 169957018 417 YSGKKSSSFYSIK 429
Cdd:MTH00094 370 FMGKKFSNFNNFN 382
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
163-290 |
2.83e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.19 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169957018 163 IFNNLIYNNEVPFLFVTLCASLLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI 242
Cdd:MTH00160 76 ILNMLNLMLFNNISSMLINSSLLL-----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLILLSYLI 141
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 169957018 243 -MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 290
Cdd:MTH00160 142 nNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISE 190
|
|
| |
