|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-195 |
3.21e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 302.26 E-value: 3.21e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00127 265 LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTML 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00127 345 LARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHI 424
|
170 180 190
....*....|....*....|....*....|....*
gi 177539257 161 INLQPYHTREHLLITLHLLPIILLIMKPEIMWGWW 195
Cdd:MTH00127 425 IALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-194 |
1.66e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 300.29 E-value: 1.66e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00068 264 LALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLL 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00068 344 LLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHL 423
|
170 180 190
....*....|....*....|....*....|....
gi 177539257 161 INLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 194
Cdd:MTH00068 424 KTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-194 |
4.51e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 291.33 E-value: 4.51e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00124 264 LALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLL 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00124 344 LTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHI 423
|
170 180 190
....*....|....*....|....*....|....
gi 177539257 161 INLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 194
Cdd:MTH00124 424 TTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-171 |
1.09e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 267.53 E-value: 1.09e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00110 264 LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMI 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00110 344 LARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHI 423
|
170
....*....|.
gi 177539257 161 INLQPYHTREH 171
Cdd:MTH00110 424 NNIKPSFTREN 434
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-191 |
9.49e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 244.46 E-value: 9.49e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00206 260 LGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTIL 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00206 340 GNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHL 419
|
170 180 190
....*....|....*....|....*....|.
gi 177539257 161 INLQPYHTREHLLITLHLLPIILLIMKPEIM 191
Cdd:MTH00206 420 LSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
3-171 |
1.50e-70 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 221.00 E-value: 1.50e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 3 LWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILV 82
Cdd:MTH00044 268 CWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSIT 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 83 RGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIIN 162
Cdd:MTH00044 348 RGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISN 427
|
....*....
gi 177539257 163 LQPYHTREH 171
Cdd:MTH00044 428 VSPISSREH 436
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
1-160 |
1.44e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 181.19 E-value: 1.44e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00150 223 LSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00150 303 LSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFL 382
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-154 |
7.38e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 177.27 E-value: 7.38e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00163 252 ISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLL 331
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRG 154
Cdd:MTH00163 332 INKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHG 405
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-194 |
6.98e-51 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 169.92 E-value: 6.98e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00014 258 ISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLF 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:MTH00014 338 LTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFM 417
|
170 180 190
....*....|....*....|....*....|....
gi 177539257 161 INLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 194
Cdd:MTH00014 418 NPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-154 |
4.28e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 167.85 E-value: 4.28e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00205 256 ISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSML 335
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRG 154
Cdd:MTH00205 336 MNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-170 |
3.57e-40 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 142.14 E-value: 3.57e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:COG1008 281 LGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIA 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:COG1008 361 DLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEEL 440
|
170
....*....|
gi 177539257 161 INLQPYHTRE 170
Cdd:COG1008 441 AELPDLNPRE 450
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
1-162 |
1.06e-34 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 127.36 E-value: 1.06e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:TIGR01972 275 LGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIA 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:TIGR01972 355 KYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPE 434
|
..
gi 177539257 161 IN 162
Cdd:TIGR01972 435 VA 436
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-170 |
1.40e-34 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 127.24 E-value: 1.40e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:PRK05846 283 LGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIA 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 160
Cdd:PRK05846 363 DYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEV 442
|
170
....*....|
gi 177539257 161 INLQPYHTRE 170
Cdd:PRK05846 443 AKLKDLNGRE 452
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-137 |
1.10e-33 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 121.27 E-value: 1.10e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLA-NTTYERTHSRTM 79
Cdd:pfam00361 153 LAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNI 232
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 177539257 80 ILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGT 137
Cdd:pfam00361 233 RDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-148 |
3.66e-32 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 120.55 E-value: 3.66e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00204 281 LSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIK 360
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLF 148
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-148 |
1.33e-31 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 119.00 E-value: 1.33e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00217 278 LSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIK 357
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLF 148
Cdd:MTH00217 358 YYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
1-147 |
3.71e-28 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 109.63 E-value: 3.71e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00226 302 MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIK 381
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYL 147
Cdd:MTH00226 382 YYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-152 |
4.38e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 100.61 E-value: 4.38e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 2 ALWGVIMTgticLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMIL 81
Cdd:COG0651 283 MLVGALGA----LAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDK 358
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 177539257 82 VRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGA-GTLITAAYSLYLFLMTQ 152
Cdd:COG0651 359 LGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
16-145 |
8.68e-23 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 94.71 E-value: 8.68e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 16 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATW 95
Cdd:PRK12561 272 QDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFAL 351
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 177539257 96 WFISNLANLALPPLPNLMGELMI---ITTMFNWSPW----TLVLTGAGTLITAAYSL 145
Cdd:PRK12561 352 FTASSMASLALPGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLL 408
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
6-145 |
6.15e-19 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 83.46 E-value: 6.15e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 6 VIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERThsRTMILVR-- 83
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmg 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 177539257 84 GLQIIFPLTATWWFISNLANLALPPLPNLMGELMI---ITTMFNWSPWT----LVLTGAGTLITAAYSL 145
Cdd:CHL00011 366 GIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMPkiliTFVMAIGMILTPIYLL 434
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
14-132 |
1.03e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 83.06 E-value: 1.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTA 93
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
90 100 110
....*....|....*....|....*....|....*....
gi 177539257 94 TWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVL 132
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
16-145 |
1.04e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 77.44 E-value: 1.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 16 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATW 95
Cdd:PRK02546 300 QRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAM 379
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 177539257 96 WFISNLANLALPPLPNLMGELMIITTMFNWSPWTL-------VLTGAGTLITAAYSL 145
Cdd:PRK02546 380 WTACSLASLALPGMSGFVAELMVFVGFATSDAYTLpfrvvvvFLAAVGVILTPIYLL 436
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
1-147 |
1.72e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 76.48 E-value: 1.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00094 219 FSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIY 298
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYL 147
Cdd:MTH00094 299 FMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFL 365
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-165 |
5.42e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 75.12 E-value: 5.42e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVI--MTGTIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSR 77
Cdd:PRK06473 274 LATWAVVsvLYGASCaIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSR 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 78 TMILVRGL---QIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRG 154
Cdd:PRK06473 354 DVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFG 433
|
170
....*....|.
gi 177539257 155 PLPQHIINLQP 165
Cdd:PRK06473 434 RLTAELSNLPR 444
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-148 |
1.24e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 74.15 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:PRK08375 277 LALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLS 356
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFN-WSPWTLVLTGAGTLITAAYSLYLF 148
Cdd:PRK08375 357 ELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIW 425
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-145 |
1.37e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 68.07 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:PRK12667 301 LGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDID 380
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGagtLITAAYSL 145
Cdd:PRK12667 381 ELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL---LIASAISL 442
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
7-149 |
3.41e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 67.38 E-value: 3.41e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQ 86
Cdd:PRK12650 284 LMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLW 363
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 177539257 87 IIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF-----NWSPWTLVLT-GAGTLITAAYSLYLFL 149
Cdd:PRK12650 364 RRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTFAYSARLVL 432
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-160 |
3.77e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 67.10 E-value: 3.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQtpwGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQ 86
Cdd:COG1009 287 LFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLR 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 87 IIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF---NWSPWTLVLTGAGTLITAAYSLYLFLMT----QRGPLPQH 159
Cdd:COG1009 364 KKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPKH 443
|
.
gi 177539257 160 I 160
Cdd:COG1009 444 P 444
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
14-168 |
5.48e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 60.54 E-value: 5.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLA---NTTYERTHSRTMILVRGLQiifP 90
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilHRQYRSDRFDRIFDVFRLQ---P 368
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 177539257 91 LTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWtLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPYHT 168
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVW-LVLAVLLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
7-138 |
2.50e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 58.78 E-value: 2.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQ 86
Cdd:PRK12647 271 LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR 350
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 177539257 87 IIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTL 138
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-147 |
2.98e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 58.62 E-value: 2.98e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:PRK08377 279 MATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIE 358
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWS-PWTLVLTGAGTLITAAYSLYL 147
Cdd:PRK08377 359 KFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
2-123 |
3.05e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 58.59 E-value: 3.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 2 ALWGVIMTgticLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTG-----------ALVLMIAHGLVSSALFCLANTT 70
Cdd:PRK08667 281 ALLGVIYA----LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSV 356
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 177539257 71 YERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF 123
Cdd:PRK08667 357 VHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-159 |
1.54e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 56.26 E-value: 1.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWG---VIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSR 77
Cdd:PRK07363 274 LAIIGtisVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTR 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 78 T-------MILVRGLqiifPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLM 150
Cdd:PRK07363 354 DldvlnglMNPIRGL----PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNR 429
|
....*....
gi 177539257 151 TQRGPLPQH 159
Cdd:PRK07363 430 TCFGRLDNK 438
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-146 |
1.62e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 56.13 E-value: 1.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 16 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATW 95
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVL 373
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 177539257 96 WFISNLaNLA-LPPLPNLMGELMIITTMFN---WSPWTLVltgAGTLITAAYSLY 146
Cdd:PRK12665 374 FFVPAL-NLGgIPPFSGFIGKVALLEAGAEdgtWLAWALV---AGGVVTSLLTLY 424
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-150 |
2.88e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 55.59 E-value: 2.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 2 ALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMIL 81
Cdd:PRK06589 287 PIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDK 366
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 177539257 82 VRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWS-PWTLVLTGAGTLITAAY-SLYLFLM 150
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsALYLLKI 437
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-119 |
1.46e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.42 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:PRK06277 272 LSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLR 351
|
90 100 110
....*....|....*....|....*....|....*....
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMII 119
Cdd:PRK06277 352 KLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-145 |
2.03e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.11 E-value: 2.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF-CLANTTYERTHSRTMILVRGLQIIFPLT 92
Cdd:COG1007 288 LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLL 367
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 177539257 93 ATWWFISnLANLA-LPPLPNLMGELMIITTMFNWSPWTLVLTGA-GTLITAAYSL 145
Cdd:COG1007 368 ALAMTIF-LLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVlNSVISAYYYL 421
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
7-118 |
2.84e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 49.61 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGL 85
Cdd:PRK08668 283 IIVGTLmAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGL 362
|
90 100 110
....*....|....*....|....*....|...
gi 177539257 86 QIIFPLTATWWFISNLANLALPPLPNLMGELMI 118
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASKWLI 395
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-146 |
1.19e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 48.00 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:PRK12644 273 LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIR 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 177539257 81 LVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFN------WSPWTLVLTGAGTLITAAYSLY 146
Cdd:PRK12644 353 KLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-147 |
1.29e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.64 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 2 ALWGVImtgtICLRQTDLKSLIAYSSVSHMGLVAGGiliqtpwGLTGALvLMIAHGLVSSALFCLANTTYERTHS---RT 78
Cdd:PRK07234 256 ALLGVL----FALLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSRNFTeliSQ 323
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 177539257 79 MILVrglqiifpltATWWFISnLANLALPPLPNLMG---ELMIITTMFNWSPWTLVLTGAGTLITAAYSLYL 147
Cdd:PRK07234 324 MLGI----------GKWIPLT-MASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAASFWKFIFL 384
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-64 |
1.62e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 47.51 E-value: 1.62e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF 64
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-150 |
2.43e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.01 E-value: 2.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 11 TICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWG---LTGALVLMIAHGLVSSALFCLANTTYERTHSRT 78
Cdd:PRK08376 303 AMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 177539257 79 MILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGT-LITAAYSLYLFLM 150
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASFVKVFHTA 455
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
14-167 |
2.58e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 47.06 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG---------LTGALVLMIAHGLVSSALFCLANTTYERTHSRTM 79
Cdd:PRK12646 293 LKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDI 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 80 ILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFN---WSPWTLVLTGAGTLI-------TAAYSLYLFL 149
Cdd:PRK12646 373 RILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqLSQFSLISMIIIVFIgviasifTFTYALYMVK 452
|
170
....*....|....*...
gi 177539257 150 MTQRGPLPQHIINLQPYH 167
Cdd:PRK12646 453 EVFWGKYDSKVFTKKNIH 470
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-123 |
3.65e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 46.48 E-value: 3.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 16 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATW 95
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
90 100
....*....|....*....|....*...
gi 177539257 96 WFISNLANLALPPLPNLMGELMIITTMF 123
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
14-109 |
5.45e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 46.03 E-value: 5.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLV-----------AGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILV 82
Cdd:PRK06521 295 LAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKL 374
|
90 100
....*....|....*....|....*..
gi 177539257 83 RGLQIIFPLTATWWFISNLANLALPPL 109
Cdd:PRK06521 375 GGLIRRMPWTAWAFLIGCLAISALPPL 401
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
16-138 |
1.24e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.97 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 16 QTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLT 92
Cdd:PRK06525 293 QQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLV 372
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 177539257 93 ATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTL 138
Cdd:PRK06525 373 GVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-67 |
1.32e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.72 E-value: 1.32e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLA 67
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
7-166 |
1.65e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 44.64 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwglTGALVLMIAHGLVSSALF-CLANTTYERTHSRTMILVRGL 85
Cdd:MTH00209 251 LMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQP---ELAFFHLITHALFKALLFiCAGNIIHSHGHSQDIRMVGNL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 86 QIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF--NWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINL 163
Cdd:MTH00209 328 WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNS 407
|
...
gi 177539257 164 QPY 166
Cdd:MTH00209 408 SFD 410
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-145 |
2.95e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 44.03 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 16 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATW 95
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATL 371
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 177539257 96 WFISNLAnLALPPLPN--LMGELM----IITTMFNWSPWTL-VLTGAGTLITAAYSL 145
Cdd:PRK12648 372 AMVAAAA-MAGVPLLNgfLSKEMFfaetLDTHLLGSLDWLLpVAATLAGAFSVAYSL 427
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-163 |
1.75e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.30 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 1 LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAggiLIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMI 80
Cdd:MTH00011 153 MAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKI 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 81 LVRGlqiifPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSP--WTLVLTgAGTLITAAYslYLFLMTQRGPLPQ 158
Cdd:MTH00011 230 SSMS-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMilILLVLI-VGSLMNLFY--YLNLIFNFMYLSP 301
|
....*
gi 177539257 159 HIINL 163
Cdd:MTH00011 302 TFSSL 306
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
15-155 |
2.47e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 41.06 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 15 RQTDLKSLIAYSSVSHMGLV-----AGGILIQTPWG--------LTGALVLMIAHGLVSSALFCLANTTYERTHSRTMIL 81
Cdd:PRK12645 294 KQTDLKGILAFSTVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRK 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 82 VRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTM--------FNWSPWTL---VLTGAGTLITAAYSLYLFLM 150
Cdd:PRK12645 374 LGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlnateanlFSLDTWGVlfpVIAWVASVFTFVYSIIFIFK 453
|
....*
gi 177539257 151 TQRGP 155
Cdd:PRK12645 454 TFFGK 458
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-143 |
3.18e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 40.70 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 14 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF-CLANT-TYERTHSRTMILVRGLQIIFPL 91
Cdd:TIGR01770 288 LAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPI 367
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 177539257 92 TATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAY 143
Cdd:TIGR01770 368 LAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
10-124 |
4.66e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 4.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 10 GTICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGLTGALVLMIAHGLVSSALFCLANTTYERTHSRT 78
Cdd:PRK08042 260 GLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRD 339
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 177539257 79 MILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFN 124
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
7-132 |
3.04e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 37.58 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwglTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQ 86
Cdd:PRK07390 296 IGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLW 372
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 177539257 87 IIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVL 132
Cdd:PRK07390 373 SRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
2-150 |
4.04e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 37.17 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 2 ALWGVIMTgticLRQTDLKSLIAYSSVSHMGLVAGGILiqtpWGLTGALVLMIAHGLVSSALFCLANttYERTHSRTMIL 81
Cdd:MTH00144 155 ALVGSIGG----LNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLW--SGDSGSMKDLG 224
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 177539257 82 VRGLQIIFPLTATWWFISnlanLA-LPPLPNLMGELMIITTMFNWSPWTLVLTG-AGTLITAAYSLYLFLM 150
Cdd:MTH00144 225 SLKPSYKTGLSIISLLLS----LGgLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
7-64 |
5.88e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 36.55 E-value: 5.88e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 177539257 7 IMTGTI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF 64
Cdd:MTH00196 163 LFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
6-147 |
6.42e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 36.73 E-value: 6.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 6 VIMTGTICLRQTDLKSLIAYSSVS---HMGLVAGGILIQTP-WGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMIL 81
Cdd:PRK12649 289 MVLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRK 368
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 177539257 82 VRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWS-----PWTLVLTG---AGTLITAAYSLYL 147
Cdd:PRK12649 369 LGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGaliggPFTIIIPAvavLGGVFTFAYSIKL 442
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
7-167 |
7.98e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 36.67 E-value: 7.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 7 IMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwglTGALVLMIAHGLVSSALF-CLANTTYERTHSRTMILVRGL 85
Cdd:MTH00207 255 LMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMP---KLALFHLITHALFKALLFvCAGSLIHSHHHSQDLRTMGNL 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 86 QIIFPLTATWWFISNLANLALPPLPNLMGELMII--TTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLpqhiiNL 163
Cdd:MTH00207 332 TNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILesSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPN-----SS 406
|
....
gi 177539257 164 QPYH 167
Cdd:MTH00207 407 SPYH 410
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
6-151 |
9.32e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 36.21 E-value: 9.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 177539257 6 VIMTGTICLRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGLTGALVLMIAHGLVSSALFCLANTT-YERTHSRTMILV 82
Cdd:MTH00020 285 VFFAATVGLVQNDLKKVIAYSTCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKM 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 177539257 83 RGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLV--LTGAGTLITAAYSLYLFLMT 151
Cdd:MTH00020 360 GGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
|